Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0414400-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:20267701:20271119:-1 gene:Os05g0414400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF659 domain containing protein. (Os05t0414400-01);Domain of unknown function DUF659 domain containing protein. (Os05t0414400-02)
Sequence

GCCCAGCCACCGCCGCCGCCGCCGCGGTGCCAGAGCCAGCTCGCCGCGGGCAACAGAGAG
GAACTTGGAGCTTCAATGGGGGAACCTAGTGTTGCACGTTCCAAAGACTGTGATATGGAG
TATGATGATAGTTCTTCTAGACAAAGTGGCGAGCCTTTGTGGGAACATGCGGAAGGTGTG
GAACGATCTGTCGATTATTCAGATGGCTTGCCCCCTACAAGCAAGGGTATGTTTCAGTCA
AATAAAAGAAAGAGCAAAGCTGCAGATGAGGATCTTCATATGAAACTTCGAACTCGATTG
GATGCTGAAGTTGCTAGAATGTTCTATTCTTCAGGATTATCCTTAAAGGCCGCGACGGAC
CCATTCTTTAAGAGCGCATTCTCTCGTGCCACCTCCATGCCTGGTTTCACGGCTGAAGAG
GATGAGCATCAAGATGACCAGCCTTCCCTAGTTACACAAATGTTCTTTTCCATAGGTTTG
TCCCCCACTATTACAAGGAACCCATATTATCGGGGTTCATTCGCTATGGTCGCGTTGTTC
CAGATTCCTGGATATGTTCCTCCTGGGGTCGACCAGCTGAAGACAACTCTCTTGCAGAAA
GAAAGGGCTGACATTGAAAACATGCTGCAGACCATAAAAAACACGTGGAGGAAAGCAGGT
GTGACGATTGTTTCTGATGGGTGGTCAGATTTTAAAAGGCGACCTATCATCAATATCATA
GCTGTCAATGAAGCTGGGCCAGTTTTTTTGCAAGCAATTAACAATGAAGATGGGTGGATG
TGGATGATGGATGACTACATTGCAGAGAAGCTCATTGCTGCAATTGAAGACGTTGGATCA
GAAAATGTTGTCCAAGTGATCACAGACAATGATCCTTTTTGCAGAGCTGCTGGGGTGCTG
ATTGAACAGAAGTACAGTCACATCCAATGGACGCCAAGTGTTGCTCATTCTTTAAGTCTT
GCCTTGGAGAATATTTGTGCTGCTAAGAATGCCGAAAATGTTGTCTTCAAAGACTGCCAC
TGGATTTCAGAAGTTATAGGGGATGCAAAAATGATAAATGATTTTATAAGTAATCATTCT
ATGGTACTATCCATGATCAGCGAGTTCAGTAAGCTGAAGATACTTGGCATTGCTCACACA
AGATTTGCTTCAGATATTGTCATGCTAAAGAGGTTTCGGTTTGACTAA

Peptide Sequence

PEP ID

Os05t0414400-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:20267701:20271119:-1 gene:Os05g0414400 transcript:Os05t0414400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF659 domain containing protein. (Os05t0414400-01);Domain of unknown function DUF659 domain containing protein. (Os05t0414400-02)
Sequence

AQPPPPPPRCQSQLAAGNREELGASMGEPSVARSKDCDMEYDDSSSRQSGEPLWEHAEGV
ERSVDYSDGLPPTSKGMFQSNKRKSKAADEDLHMKLRTRLDAEVARMFYSSGLSLKAATD
PFFKSAFSRATSMPGFTAEEDEHQDDQPSLVTQMFFSIGLSPTITRNPYYRGSFAMVALF
QIPGYVPPGVDQLKTTLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINII
AVNEAGPVFLQAINNEDGWMWMMDDYIAEKLIAAIEDVGSENVVQVITDNDPFCRAAGVL
IEQKYSHIQWTPSVAHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFISNHS
MVLSMISEFSKLKILGIAHTRFASDIVMLKRFRFD

Transcript Sequence

Transcript ID

Os05t0414400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:20267701:20271119:-1 gene:Os05g0414400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF659 domain containing protein. (Os05t0414400-01);Domain of unknown function DUF659 domain containing protein. (Os05t0414400-02)
Sequence

GCGGGCTGAGGTGAAAAGGTGGAGAGGGTTTCCCGCGTCTCGCGACGAGGGTTTAGGCCC
AGCCACCGCCGCCGCCGCCGCGGTGCCAGAGCCAGCTCGCCGCGGGCAACAGAGAGGAAC
TTGGAGCTTCAATGGGGGAACCTAGTGTTGCACGTTCCAAAGACTGTGATATGGAGTATG
ATGATAGTTCTTCTAGACAAAGTGGCGAGCCTTTGTGGGAACATGCGGAAGGTGTGGAAC
GATCTGTCGATTATTCAGATGGCTTGCCCCCTACAAGCAAGGGTATGTTTCAGTCAAATA
AAAGAAAGAGCAAAGCTGCAGATGAGGATCTTCATATGAAACTTCGAACTCGATTGGATG
CTGAAGTTGCTAGAATGTTCTATTCTTCAGGATTATCCTTAAAGGCCGCGACGGACCCAT
TCTTTAAGAGCGCATTCTCTCGTGCCACCTCCATGCCTGGTTTCACGGCTGAAGAGGATG
AGCATCAAGATGACCAGCCTTCCCTAGTTACACAAATGTTCTTTTCCATAGGTTTGTCCC
CCACTATTACAAGGAACCCATATTATCGGGGTTCATTCGCTATGGTCGCGTTGTTCCAGA
TTCCTGGATATGTTCCTCCTGGGGTCGACCAGCTGAAGACAACTCTCTTGCAGAAAGAAA
GGGCTGACATTGAAAACATGCTGCAGACCATAAAAAACACGTGGAGGAAAGCAGGTGTGA
CGATTGTTTCTGATGGGTGGTCAGATTTTAAAAGGCGACCTATCATCAATATCATAGCTG
TCAATGAAGCTGGGCCAGTTTTTTTGCAAGCAATTAACAATGAAGATGGGTGGATGTGGA
TGATGGATGACTACATTGCAGAGAAGCTCATTGCTGCAATTGAAGACGTTGGATCAGAAA
ATGTTGTCCAAGTGATCACAGACAATGATCCTTTTTGCAGAGCTGCTGGGGTGCTGATTG
AACAGAAGTACAGTCACATCCAATGGACGCCAAGTGTTGCTCATTCTTTAAGTCTTGCCT
TGGAGAATATTTGTGCTGCTAAGAATGCCGAAAATGTTGTCTTCAAAGACTGCCACTGGA
TTTCAGAAGTTATAGGGGATGCAAAAATGATAAATGATTTTATAAGTAATCATTCTATGG
TACTATCCATGATCAGCGAGTTCAGTAAGCTGAAGATACTTGGCATTGCTCACACAAGAT
TTGCTTCAGATATTGTCATGCTAAAGAGGTTTCGGTTTGACTAAGCAATCTCTTATAGGG
ATTGTCATCAGTGACAAGTGGTCCGTTTACAGTAAAGATGACGAGGGGAAAGCAAAGCTT
GTGATGAAAAAAACTTACTGATGAATTGTGGTGGGATCAAGTTGATTACATTCTTGCTTT
CACAGAACCGATATATTCAATGATACGCATCACGGACACTGAAAAGCAATGCATTCATTT
GATCTATGGAATGTGGAATGATATGACAGAGAAGGTAAAGGCTATTATTTATAAACATGA
AGGCAAGGGGGCTGATGAAGAATCAACTTTTTACTCTGCTGTAAATGGCATTTAGTAGAT
TGGTGGGGCAAGACCAGAACTCCACTCCACTGTTTAGCACATGCACTAAATCCAAGATGA
GTCCTGGTTTAAGTTACTAAATGATTTCTTTTTTAAGCCATGTAATATCACTATCTTTTG
GTCTGTTCTGTAGGTGTTACGCCGATAGTTGGATTGATGAAGGCGCTAATCGTCAACCCC
CACATAGTGATGCTGAGATTAATGAAATGGCAAATGACTGCTTGAAGAAATTATTTCCTG
CTGCAGATGACTTGACGGCGATTAAAGCAGAGTATGCAAAGTTTTCTCTTTTGAGCACGG
AGTTTGCTTCCTCAGGTACAGGATGCTTTAACTTGAATTCCATCACTGATAGGGATGTTC
TTGACCCAAAAACATGGTGGGTGACCCATGGCAGTCCAACACCTAAGTTGCAGGAGCTAG
CCCTCACGATTCTTGGCCATCCTGCCTCGGCATCCTGCTGTGAGAGAAACTGGACCACAT
ATAAATTGATTCGCGCAGCCATGAAGATTGAGAGCCGTCCTAAATGGGTTGATGATTTGG
TGTTTGTCCACACCAGTTTGCGGCTTTGGACAAGAACCACAGTTTTACTATAGTGATCCA
GAGTCAATGTTTTGGGACATTGGGGGTAACGCCGATATTCTTGCAAGCTTAGTCCCTGCT
GATTTACTTGAGTTTGCTGACTTCTCACTCGACGAACCTGAGTTCGAGCTTGCCATTCTT
GAAGGGCTGGAAGGTGATGATTTGGCATGAAGATGGAGGTGGATTGGTGGAAGACTTTCT
AGAATCCTAGCTCAATCTGTGAATGGCCTGATGCCACCTTTCCTATCAGGCTGTCACTCG
GGTCTACCTTGTCTTTTGGGGAAAGTGGTGTGTTTTGGTTATGTACTTATGTGGCCACTC
TGGTAGTATGCAAAACTTTGCAGTATGCAATGCTACTACCTCCGTCCCAAAATATAACCA
CTTTTAGCTACGAATCTGGACACGGTTGTCTAGATTCATAGCTAAAAATGCTTACATTTT
GAGACGGAGGGAGTATATAGTAGTGGTAGTGATGGACTGGTGGTAGACTGGAAGTATGCA
TGCAAAGCTATGCAATGGCAGGTAGTGGTAATGGTATTATGCAAAGCTATGTGATAAGAC
TTTGCTATTATATATGCAAATCTGTGGAAACTGGACGGTTTGCTTTT