Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0413200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:20204138:20207282:1 gene:Os05g0413200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-TUBULIN 6 description:Beta-tubulin , Responseto gebberellin (GA) and brassinolide (BL) (Os05t0413200-01)
Sequence	ATGAGGGAGATCTTGCACATCCAGGGCGGGCAGTGCGGGAACCAGATCGGGTCCAAGTTC TGGGAGGTGGTGTGCGACGAGCATGGCATCGACCCGACGGGGAGGTACGCCGGCACGTCG GACCTGCAGCTGGAGCGCGTGAACGTCTACTACAACGAGGCGTCGTGCGGCCGGTTCGTG CCGCGCGCCGTGCTCATGGACCTGGAGCCGGGCACCATGGACTCCGTCCGCACGGGGCCC TACGGCCAGATCTTCCGTCCCGACAACTTCGTCTTCGGCCAGTCCGGCGCCGGCAACAAC TGGGCCAAGGGCCACTACACCGAGGGCGCCGAGCTCATCGACTCCGTCCTCGACGTCGTC CGCAAGGAGGCCGAGAATTGCGACTGCCTCCAAGGTTTCCAGGTGTGCCACTCGCTGGGC GGCGGCACGGGCTCCGGCATGGGCACCCTGCTGATCTCCAAGATCAGGGAGGAGTACCCG GACAGGATGATGCTCACCTTCTCCGTGTTCCCGTCGCCCAAGGTGTCGGACACCGTGGTG GAGCCCTACAACGCCACGCTCTCGGTCCACCAGCTCGTGGAGAACGCCGACGAGTGCATG GTGCTCGACAACGAGGCGCTCTATGACATCTGCTTCCGCACCCTCAAGCTGACGACTCCC AGCTTTGGTGATCTGAACCACTTGATTAGTGCCACCATGAGCGGTGTCACCTGCTGCCTG CGCTTCCCAGGGCAGCTGAACTCCGACCTCCGCAAGCTCGCCGTCAACCTGATCCCCTTC CCGCGGCTCCACTTCTTCATGGTGGGCTTCGCGCCGCTCACCTCACGCGGCTCGCAGCAG TACCGCGCCCTCACTGTCCCTGAGCTCACCCAGCAGATGTGGGACGCCAAGAACATGATG TGCGCCGCCGACCCGCGCCACGGCCGCTACCTGACGGCCTCGGCCATGTTCCGCGGCAAG ATGAGCACCAAGGAGGTGGACGAGCAGATGATCAACGTGCAGAACAAGAACTCGTCCTAC TTCGTGGAGTGGATCCCCAACAACGTCAAGTCGAGCGTGTGTGACATCCCGCCGCGCGGC CTCTCCATGGCGTCTACGTTCGTCGGCAACTCCACCTCCATCCAGGAGATGTTCCGCCGC GTCAGCGAGCAGTTCACGGCCATGTTCAGGAGGAAGGCGTTCTTGCACTGGTACACGGGC GAGGGCATGGACGAGATGGAGTTCACCGAGGCGGAGAGCAACATGAACGACCTCGTCTCC GAGTACCAGCAGTATCAGGACGCCACCGCCGACGAGGCCGAGTACGAGGAAGAAGAGGAC GCGATACAGGAGTAG

Peptide Sequence

PEP ID	Os05t0413200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:20204138:20207282:1 gene:Os05g0413200 transcript:Os05t0413200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-TUBULIN 6 description:Beta-tubulin , Responseto gebberellin (GA) and brassinolide (BL) (Os05t0413200-01)
Sequence	MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS EYQQYQDATADEAEYEEEEDAIQE

Transcript Sequence

Transcript ID	Os05t0413200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:20204138:20207282:1 gene:Os05g0413200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-TUBULIN 6 description:Beta-tubulin , Responseto gebberellin (GA) and brassinolide (BL) (Os05t0413200-01)
Sequence	ACACACTCTCCCATCCCAACCTCTCCCAAAATTAGCCCCGATCCGATCGCTTCCTAGCCC TGATTCGAGGTAAAAAAGGGGAGGAGAAGATGAGGGAGATCTTGCACATCCAGGGCGGGC AGTGCGGGAACCAGATCGGGTCCAAGTTCTGGGAGGTGGTGTGCGACGAGCATGGCATCG ACCCGACGGGGAGGTACGCCGGCACGTCGGACCTGCAGCTGGAGCGCGTGAACGTCTACT ACAACGAGGCGTCGTGCGGCCGGTTCGTGCCGCGCGCCGTGCTCATGGACCTGGAGCCGG GCACCATGGACTCCGTCCGCACGGGGCCCTACGGCCAGATCTTCCGTCCCGACAACTTCG TCTTCGGCCAGTCCGGCGCCGGCAACAACTGGGCCAAGGGCCACTACACCGAGGGCGCCG AGCTCATCGACTCCGTCCTCGACGTCGTCCGCAAGGAGGCCGAGAATTGCGACTGCCTCC AAGGTTTCCAGGTGTGCCACTCGCTGGGCGGCGGCACGGGCTCCGGCATGGGCACCCTGC TGATCTCCAAGATCAGGGAGGAGTACCCGGACAGGATGATGCTCACCTTCTCCGTGTTCC CGTCGCCCAAGGTGTCGGACACCGTGGTGGAGCCCTACAACGCCACGCTCTCGGTCCACC AGCTCGTGGAGAACGCCGACGAGTGCATGGTGCTCGACAACGAGGCGCTCTATGACATCT GCTTCCGCACCCTCAAGCTGACGACTCCCAGCTTTGGTGATCTGAACCACTTGATTAGTG CCACCATGAGCGGTGTCACCTGCTGCCTGCGCTTCCCAGGGCAGCTGAACTCCGACCTCC GCAAGCTCGCCGTCAACCTGATCCCCTTCCCGCGGCTCCACTTCTTCATGGTGGGCTTCG CGCCGCTCACCTCACGCGGCTCGCAGCAGTACCGCGCCCTCACTGTCCCTGAGCTCACCC AGCAGATGTGGGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTACC TGACGGCCTCGGCCATGTTCCGCGGCAAGATGAGCACCAAGGAGGTGGACGAGCAGATGA TCAACGTGCAGAACAAGAACTCGTCCTACTTCGTGGAGTGGATCCCCAACAACGTCAAGT CGAGCGTGTGTGACATCCCGCCGCGCGGCCTCTCCATGGCGTCTACGTTCGTCGGCAACT CCACCTCCATCCAGGAGATGTTCCGCCGCGTCAGCGAGCAGTTCACGGCCATGTTCAGGA GGAAGGCGTTCTTGCACTGGTACACGGGCGAGGGCATGGACGAGATGGAGTTCACCGAGG CGGAGAGCAACATGAACGACCTCGTCTCCGAGTACCAGCAGTATCAGGACGCCACCGCCG ACGAGGCCGAGTACGAGGAAGAAGAGGACGCGATACAGGAGTAGAGACTGTCTGGGCAAT GGTACCTCGTATCCCCTGCCCATCGTTACCCTAATATGTTTGCCTGAACATCATCGCAGT TGCATCACCATAGCTACCTCCGCACCTTAAAATTTGATGCTTGTTTGTATGCTATCGCGT GTATCAGGAGTGCGTACTGGTTCCGTATGCTAAAGTCTTGGCTATTGATGT