Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0410200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:20038069:20039445:1 gene:Os05g0410200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hsr203j description:Alpha/beta hydrolase fold-3 domain containing protein. (Os05t0410200-01)
Sequence	ATGGCCATCGCCACCGAGTCGCAGCAGGCGCAGGTGCAAGCCGCCGCCACCGACGCCGTC GCGGCGGCGGCGGTCGGGCGCAAGGTGGTGGACGAGGTGTCCGGCTGGCTGCGCGTGTTC GACGACGGCACCGTCGACCGCACGTGGACGGGTCCCCCCGAGGTGCTCCCGCTGATGCAG CCGGTGCCCGCCTACGCCGAGCCGCGCGACGGCCACACGCTGCACGACCTCCCCGGCGAG CCCAACCTCCGCGTGTACCTCCCCGAGGTCGCCCTCGCCGAGCGGCGCCTCCCCGTCGTC GTGCAGCTCCACGGTGGCGGCTTCTGCATCTCCCACCCGTCCTGGCTCATGTACCACCAC TTCTACGCGCGCCTCGCGTGCGCGCTCCCGGCCGTGGTGGTCGCCGTCGAGCTGCCCTTG GCGCCCGAGCGCCGCCTGCCGGCGCACATCGACACCGGCGTCGACGGGCTCCGCCGGCTC CGCTCCATCGCGCTGTCCGACGCCGCCGCTCTCGGCGACCCGGCGGCGGAGCTCCTCCGG ACGGCCGCCGACTTCTCGCGGGTGTTCCTCATCGGGGACAGCTCGGGCGGCAACCTCGTC CACCACGTCGGCGCGCGCGTCGGCGAGGACGGGGCGGACAGCTGGGCGCCCCTCCGCGTC GCCGGAGGCATCCCGCTCCACCCGGGGTTCGTGCACGCCACCCGGAGCAAGTCGGAGCTG GAGCCGAGGCCCGACTCGGTGTTCTTCACCCTCGACATGCTCGACAAGTTCCTCGCCATG GCGCTCCCCGAGGGCGCCACCAAGGACCACCCGTACACGTGCCCGATGGGGCCGAACGCG CCGCCGCTGGAGTCCGTCCCGCTGCCGCCGCTGCTGGTCGCCGTCGCCGAGCACGACCTC ATCCGGGACACCAACCTCGAGTACTGCGACGCGCTGCGCACCGCCGGCAAGGACGTGGAG GTGCTGGTCAACCGCGGCATGAGCCACTCCTTCTACCTCAACAAGTACGCCGTCGACATG GACCCGGCCACCGGCGAGAGGACCCGGGAGCTCGTCGACGCCATCAAGAGCTTCGTCGAC CGCCACTAG

Peptide Sequence

PEP ID	Os05t0410200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:20038069:20039445:1 gene:Os05g0410200 transcript:Os05t0410200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hsr203j description:Alpha/beta hydrolase fold-3 domain containing protein. (Os05t0410200-01)
Sequence	MAIATESQQAQVQAAATDAVAAAAVGRKVVDEVSGWLRVFDDGTVDRTWTGPPEVLPLMQ PVPAYAEPRDGHTLHDLPGEPNLRVYLPEVALAERRLPVVVQLHGGGFCISHPSWLMYHH FYARLACALPAVVVAVELPLAPERRLPAHIDTGVDGLRRLRSIALSDAAALGDPAAELLR TAADFSRVFLIGDSSGGNLVHHVGARVGEDGADSWAPLRVAGGIPLHPGFVHATRSKSEL EPRPDSVFFTLDMLDKFLAMALPEGATKDHPYTCPMGPNAPPLESVPLPPLLVAVAEHDL IRDTNLEYCDALRTAGKDVEVLVNRGMSHSFYLNKYAVDMDPATGERTRELVDAIKSFVD RH

Transcript Sequence

Transcript ID	Os05t0410200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:20038069:20039445:1 gene:Os05g0410200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hsr203j description:Alpha/beta hydrolase fold-3 domain containing protein. (Os05t0410200-01)
Sequence	ACCGCGCACATCGAATCGCATCGCACACACGGCGGAAGCAACGCCACTAGCCTGACGTAC GTACGGCAGCAATGGCCATCGCCACCGAGTCGCAGCAGGCGCAGGTGCAAGCCGCCGCCA CCGACGCCGTCGCGGCGGCGGCGGTCGGGCGCAAGGTGGTGGACGAGGTGTCCGGCTGGC TGCGCGTGTTCGACGACGGCACCGTCGACCGCACGTGGACGGGTCCCCCCGAGGTGCTCC CGCTGATGCAGCCGGTGCCCGCCTACGCCGAGCCGCGCGACGGCCACACGCTGCACGACC TCCCCGGCGAGCCCAACCTCCGCGTGTACCTCCCCGAGGTCGCCCTCGCCGAGCGGCGCC TCCCCGTCGTCGTGCAGCTCCACGGTGGCGGCTTCTGCATCTCCCACCCGTCCTGGCTCA TGTACCACCACTTCTACGCGCGCCTCGCGTGCGCGCTCCCGGCCGTGGTGGTCGCCGTCG AGCTGCCCTTGGCGCCCGAGCGCCGCCTGCCGGCGCACATCGACACCGGCGTCGACGGGC TCCGCCGGCTCCGCTCCATCGCGCTGTCCGACGCCGCCGCTCTCGGCGACCCGGCGGCGG AGCTCCTCCGGACGGCCGCCGACTTCTCGCGGGTGTTCCTCATCGGGGACAGCTCGGGCG GCAACCTCGTCCACCACGTCGGCGCGCGCGTCGGCGAGGACGGGGCGGACAGCTGGGCGC CCCTCCGCGTCGCCGGAGGCATCCCGCTCCACCCGGGGTTCGTGCACGCCACCCGGAGCA AGTCGGAGCTGGAGCCGAGGCCCGACTCGGTGTTCTTCACCCTCGACATGCTCGACAAGT TCCTCGCCATGGCGCTCCCCGAGGGCGCCACCAAGGACCACCCGTACACGTGCCCGATGG GGCCGAACGCGCCGCCGCTGGAGTCCGTCCCGCTGCCGCCGCTGCTGGTCGCCGTCGCCG AGCACGACCTCATCCGGGACACCAACCTCGAGTACTGCGACGCGCTGCGCACCGCCGGCA AGGACGTGGAGGTGCTGGTCAACCGCGGCATGAGCCACTCCTTCTACCTCAACAAGTACG CCGTCGACATGGACCCGGCCACCGGCGAGAGGACCCGGGAGCTCGTCGACGCCATCAAGA GCTTCGTCGACCGCCACTAGACGTGGAGATCAGAGAAGCGCATCTTCTCCACCGTACGTG TAGCACCTTCCAGGTTGTGATTGTTTCTCGTCTCGTGTCATGACTGTCCGCCATACGTTG GCCTGAGCTTGACCTTGTGTGTGGCTTGCTGTCCATGTCAAGCCGATATCATGTACGCAT CAGTGTTTAGGTACGCGTTTGAGTAGTTACAAATAAATAATTGGATCATTCCCGAAC