Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0409400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19988759:19994090:1 gene:Os05g0409400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Microtubule-associated protein MAP65-1a. (Os05t0409400-01)
Sequence	CCGCTCCTCTCTATAAACCCTAGTACTCGGGGGGCACCGCGCGCTCCGTCCCCCAAATCC GATCCATCCCGCGAGATCGCCCCGCGCCCTTCCCCCTCGATAATGGCGACGGCGCCGCCG CGGGTATCCTGCGGCTCCCTTCTCCAGGAACTTCAGGTACTCTGGGGACAAATTGGCCAG AATGAAGCAGAAAGAGACAGGATGATATTGCAGCTAGAGGAGGATTGCCTCAATGTTTAC AGAAAGAAAGTAGAGCAAACAAGAAAGCAAAAGGAGGACCTGATTGAAGAACTTTCTTTT GGTGAATTGGATATTGAGAAAATCCTTTCTGCTCTTGGAGAGCGAGAATCTTTTTCTAGG GTAGAGAAACTTGGGGGTACATTACTGGAACAACTTGCGAAAGTAGAGCCTGTTCTGGAA GATTTGAGACGGAGGAGGGATGAGCGAGTCGAGGAGTTTATGGTTGTACAGGCGCAGATA GTTCGGTTACATGCAGAAATTTCAGGAACAATTGAAAATGGGGATCCTGTACCTCCTTTG GTGGATGAGACAAACCTATCCTTAAGGAGGCTAGAAGAGTTTAAGAGCCAGCTTAAGGAG CTCCAAACTGAAAAGAATCTCAGGCTGCAAAAGATTGATGTACAGATCAATTGTATCCAT GAAATCTGCAACATGATGTCTCTTGATCTCAAGAAAGAACTTTATGATGTTCATCCCAGC TTCGTTGAGTTGGGAAGGACCACATCGATGAGTATAAGCGACAGCACACTTGAAAGGCTT GCAGGAAAAGTTCATTCGTTAAATCAAGAAAAGAAACAGAGGCTTCGGAAGTTGCAAGAT CTTGGCAGCACACTTATTGAGTTATGGAACCTAATGGACACACCAACTGCTGAACAGAAA TGCTTTGACCATGTTACTTCTTTGATTTCAGTCTCACCAAGCACAAAAATGCCCCAAGGA TGCCTTGCACGTGAACTTATTGAGAAGGTAGAGGTTGAGGTTAAGAGGCTGAATTGTTTG AAAGCCAGCAAAATGAAAGAGCTTGTATTAAAGAAAATGATTGAGCTTGAAGAGATCTAC AAAAGTGTTCACATGGATATTGACAGTGATTACGAGAGGAGAATTCTCAATGATCTTATT GATTCTGGTAAAGCAGATCTCTCAGATTTGCTTACAGGAATGGATGGTCGAATTACAAAG GCAAGAGAGCACGCTCTAAGCAGAAAGGAAATTCTAGAGAAGGTTGAAAAATGGACATTA GCATCTGAAGAGGAGAGTTGGCTTGATGAATATGAAAAGGATCAGAATCGCTATAATGCT GGTCGAGGAGCTCACAAAAATCTCAAGCACGCTGAAAAAGCAAGGATGCTGGTTAGCAAA ATTCCATCTCTGCTGGAGAATTTAACTGCTAAAATTAAAGCTTGGGAAAAGGAGAACGGT GTCCCATTTATGTATGATAAGATAAGGCTGTTGGATAGTTTAGAAGAATACACCTCAAGA AGACAGCAGAAAGATGAGGAGAAACGGCGATCGCGGGAGCTCAAGAAACTGCAAGAACAG TATGCAGCAGAACAAGGTGCTACGTTTGGAACGAAGCCAAGCCCTGCGCGTCCACCTTCG GCTAGGAAGCCTCTTGGGCAGAGCTCGAACGCCAACATAATCAGTGGAACTCCTACCAGC CGCCGTGTCTGTACCCCGATGGCACGCAAGGGAGGCTTGTCTTCTGGAAAAGTGAAAGAG GCTGGCAAGACAGCCTTTATACCGGCAAACTATGTGGCCCTTCCCAAGGATTGCTCAGAC AATTCTAACCTGTGA

Peptide Sequence

PEP ID	Os05t0409400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19988759:19994090:1 gene:Os05g0409400 transcript:Os05t0409400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Microtubule-associated protein MAP65-1a. (Os05t0409400-01)
Sequence	PLLSINPSTRGAPRAPSPKSDPSREIAPRPSPSIMATAPPRVSCGSLLQELQVLWGQIGQ NEAERDRMILQLEEDCLNVYRKKVEQTRKQKEDLIEELSFGELDIEKILSALGERESFSR VEKLGGTLLEQLAKVEPVLEDLRRRRDERVEEFMVVQAQIVRLHAEISGTIENGDPVPPL VDETNLSLRRLEEFKSQLKELQTEKNLRLQKIDVQINCIHEICNMMSLDLKKELYDVHPS FVELGRTTSMSISDSTLERLAGKVHSLNQEKKQRLRKLQDLGSTLIELWNLMDTPTAEQK CFDHVTSLISVSPSTKMPQGCLARELIEKVEVEVKRLNCLKASKMKELVLKKMIELEEIY KSVHMDIDSDYERRILNDLIDSGKADLSDLLTGMDGRITKAREHALSRKEILEKVEKWTL ASEEESWLDEYEKDQNRYNAGRGAHKNLKHAEKARMLVSKIPSLLENLTAKIKAWEKENG VPFMYDKIRLLDSLEEYTSRRQQKDEEKRRSRELKKLQEQYAAEQGATFGTKPSPARPPS ARKPLGQSSNANIISGTPTSRRVCTPMARKGGLSSGKVKEAGKTAFIPANYVALPKDCSD NSNL

Transcript Sequence

Transcript ID	Os05t0409400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19988759:19994090:1 gene:Os05g0409400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Microtubule-associated protein MAP65-1a. (Os05t0409400-01)
Sequence	GTCGATTCCCCTTTCTCCCGCTCTTCCCCTTTCAAATCTCTCTCTAGCCGCTCCTCTCTA TAAACCCTAGTACTCGGGGGGCACCGCGCGCTCCGTCCCCCAAATCCGATCCATCCCGCG AGATCGCCCCGCGCCCTTCCCCCTCGATAATGGCGACGGCGCCGCCGCGGGTATCCTGCG GCTCCCTTCTCCAGGAACTTCAGGTACTCTGGGGACAAATTGGCCAGAATGAAGCAGAAA GAGACAGGATGATATTGCAGCTAGAGGAGGATTGCCTCAATGTTTACAGAAAGAAAGTAG AGCAAACAAGAAAGCAAAAGGAGGACCTGATTGAAGAACTTTCTTTTGGTGAATTGGATA TTGAGAAAATCCTTTCTGCTCTTGGAGAGCGAGAATCTTTTTCTAGGGTAGAGAAACTTG GGGGTACATTACTGGAACAACTTGCGAAAGTAGAGCCTGTTCTGGAAGATTTGAGACGGA GGAGGGATGAGCGAGTCGAGGAGTTTATGGTTGTACAGGCGCAGATAGTTCGGTTACATG CAGAAATTTCAGGAACAATTGAAAATGGGGATCCTGTACCTCCTTTGGTGGATGAGACAA ACCTATCCTTAAGGAGGCTAGAAGAGTTTAAGAGCCAGCTTAAGGAGCTCCAAACTGAAA AGAATCTCAGGCTGCAAAAGATTGATGTACAGATCAATTGTATCCATGAAATCTGCAACA TGATGTCTCTTGATCTCAAGAAAGAACTTTATGATGTTCATCCCAGCTTCGTTGAGTTGG GAAGGACCACATCGATGAGTATAAGCGACAGCACACTTGAAAGGCTTGCAGGAAAAGTTC ATTCGTTAAATCAAGAAAAGAAACAGAGGCTTCGGAAGTTGCAAGATCTTGGCAGCACAC TTATTGAGTTATGGAACCTAATGGACACACCAACTGCTGAACAGAAATGCTTTGACCATG TTACTTCTTTGATTTCAGTCTCACCAAGCACAAAAATGCCCCAAGGATGCCTTGCACGTG AACTTATTGAGAAGGTAGAGGTTGAGGTTAAGAGGCTGAATTGTTTGAAAGCCAGCAAAA TGAAAGAGCTTGTATTAAAGAAAATGATTGAGCTTGAAGAGATCTACAAAAGTGTTCACA TGGATATTGACAGTGATTACGAGAGGAGAATTCTCAATGATCTTATTGATTCTGGTAAAG CAGATCTCTCAGATTTGCTTACAGGAATGGATGGTCGAATTACAAAGGCAAGAGAGCACG CTCTAAGCAGAAAGGAAATTCTAGAGAAGGTTGAAAAATGGACATTAGCATCTGAAGAGG AGAGTTGGCTTGATGAATATGAAAAGGATCAGAATCGCTATAATGCTGGTCGAGGAGCTC ACAAAAATCTCAAGCACGCTGAAAAAGCAAGGATGCTGGTTAGCAAAATTCCATCTCTGC TGGAGAATTTAACTGCTAAAATTAAAGCTTGGGAAAAGGAGAACGGTGTCCCATTTATGT ATGATAAGATAAGGCTGTTGGATAGTTTAGAAGAATACACCTCAAGAAGACAGCAGAAAG ATGAGGAGAAACGGCGATCGCGGGAGCTCAAGAAACTGCAAGAACAGTATGCAGCAGAAC AAGGTGCTACGTTTGGAACGAAGCCAAGCCCTGCGCGTCCACCTTCGGCTAGGAAGCCTC TTGGGCAGAGCTCGAACGCCAACATAATCAGTGGAACTCCTACCAGCCGCCGTGTCTGTA CCCCGATGGCACGCAAGGGAGGCTTGTCTTCTGGAAAAGTGAAAGAGGCTGGCAAGACAG CCTTTATACCGGCAAACTATGTGGCCCTTCCCAAGGATTGCTCAGACAATTCTAACCTGT GAGGCTGTGAGAATGTCAACACCAGTTATAAGTAGGAGTCTTTTACTCGGGCTTCTGCCT TTTCATTTTGCTTGATCTATTCGATTAGCATCTTGCTAAATAGTTGGTCCGTTATGTGAT CTGAACTTTTGATGCGAAAACCTTTCTGACGTGAAATGACCCCATCTATAGGATGATTCT GTACTGGAAGATTCCTGATTTTAACTTGACAGTGTCCATTTAAATTATGTTGTCTTTCAG TCCAAAAAAAGTTGTCTTTATGTAGTTTACTTGACTCACCTAAAGTAAATTTCATCTCCC GATAGTTTCTTCGGTTGATACTGCAGTTATCTGCAAAATGGTTTTCTAATTTGTTCTTAT ACTTGTTTCTCAACAATTATATATCAAAATGGAGATTTCCTTG