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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0409300-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:19986124:19987626:1 gene:Os05g0409300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine protease inhibitor. (Os05t0409300-01);Similar to Cystatin Hv-CPI3. (Os05t0409300-02)
Sequence

CAGGGTGCTGAATTGGAATTTGCACGGATAGTGAAAGCCAAGCGTCAAGTTGTGACTGGT
ACCTTGCATGACCTGATGTTGGAGGTAGTTGATTCTGGAAAGAAAAGCCTGTATAGTGCA
AAGGTATGGGTGAAGCCGTGGCTAGATTTTAAGGCAGTCGTCGAGTTCCGTCACGTTGGG
GACTCCCAGTCACAGTCGGCCACTGCTGCTGATGATAACGCTGGGCAAGATACTGCTGAT
CCCACTGTGGCATCAAGGAACGACCTGCACAACACTGAGAACAATAAAGTCTCTGTTGTC
CTGTCAACCTTTTCTCAGACATACTCGGTGTGA

Peptide Sequence

PEP ID

Os05t0409300-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:19986124:19987626:1 gene:Os05g0409300 transcript:Os05t0409300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine protease inhibitor. (Os05t0409300-01);Similar to Cystatin Hv-CPI3. (Os05t0409300-02)
Sequence

QGAELEFARIVKAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVG
DSQSQSATAADDNAGQDTADPTVASRNDLHNTENNKVSVVLSTFSQTYSV

Transcript Sequence

Transcript ID

Os05t0409300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:19986124:19987626:1 gene:Os05g0409300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine protease inhibitor. (Os05t0409300-01);Similar to Cystatin Hv-CPI3. (Os05t0409300-02)
Sequence

CAGGGTGCTGAATTGGAATTTGCACGGATAGTGAAAGCCAAGCGTCAAGTTGTGACTGGT
ACCTTGCATGACCTGATGTTGGAGGTAGTTGATTCTGGAAAGAAAAGCCTGTATAGTGCA
AAGGTATGGGTGAAGCCGTGGCTAGATTTTAAGGCAGTCGTCGAGTTCCGTCACGTTGGG
GACTCCCAGTCACAGTCGGCCACTGCTGCTGATGATAACGCTGGGCAAGATACTGCTGAT
CCCACTGTGGCATCAAGGAACGACCTGCACAACACTGAGAACAATAAAGTCTCTGTTGTC
CTGTCAACCTTTTCTCAGACATACTCGGTGTGAATCTAGCTCCATGGAGAGGATATGGAA
GACTTGAGCTTCTGAGAGCTAGCTGTCAGTAATTTGTGAAGTAAAGTAGCTGTTATCCTT
TTGTGAAGTTTTCCCCACTGTTATGGAATGATGTCTAGATCGTAATATGCCGTTGAGCAG
ACATGAGTTTGACATCTGGAGTGTATATTTGTTGCTGCAAACTGCAAAGTGAACACTCCC
ATGTATATTCCATACCTTTCGTTCCCATGCATGTATATAAGGCATTACTGCT