Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0408200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19923167:19932333:1 gene:Os05g0408200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 9 description:SBP domain containing protein. (Os05t0408200-01)
Sequence	ATGGACGCCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGTGGGGTGGATGCCGGC GAGCCCGTCTGGGACTGGGGGAACCTCCTCGACTTCGCCGTCCATGACGACGACTCGCTG GTCCTCCCGTGGGGGGACGATTCGATTGGGATCGAGGCCGATCCCGCCGAGGCGGCGCTG CTCCCCCCTGCCCCGTCGCCGCAGCCGGCGGAGGCGGAGGCGGAGGCCGCGGGGCCGGCG TCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCG CGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGAC GAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGG AAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGG GCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATA CGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCC GCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATA TTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAA AGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTG GATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACT ACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTG GGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAA AGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAA AACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGT CCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGC TTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATT CGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAG TTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTG TTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGAT GGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCAT CCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGAT CAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGC CGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCT CAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCA TTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGC AAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATA AGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATC GACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTA GCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAAT GTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAAC TTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCT CGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGG GCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGT ACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAA AATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGACTAGT GCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGT CTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTC CACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTAC TCATCATAG

Peptide Sequence

PEP ID	Os05t0408200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19923167:19932333:1 gene:Os05g0408200 transcript:Os05t0408200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 9 description:SBP domain containing protein. (Os05t0408200-01)
Sequence	MDAPGGGGGGGGGGGGVDAGEPVWDWGNLLDFAVHDDDSLVLPWGDDSIGIEADPAEAAL LPPAPSPQPAEAEAEAAGPASLPSSMQAEGSKRRVRKRDPRLVCPNYLAGRVPCACPEID EMAAALEVEDVATELLAGARKKPKGAGRGSGAAVGGSGGGASRGTPAEMKCQVPGCEADI RELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNK RRRRKPDSKGILEKDIDDQLDFSADGSGDGELREENIDVTTSETLETVLSNKVLDRETPV GSDDVLSSPTCAQPSLQIDQSKSLVTFAASVEACLGTKQENTKLTNSPVHDTKSTYSSSC PTGRVSFKLYDWNPAEFPRRLRHQIFEWLSSMPVELEGYIRPGCTILTVFVAMPQHMWDK LSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRLEVQSPRIHYVH PSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLKHDCRRILSHETFDCIGSGEHILDS QHEIFRINITTSKLDTHGPAFVEVENMFGLSNFVPILVGSKHLCSELEQIHDALCGSSDI SSDPCELRGLRQTAMLGFLIDIGWLIRKPSIDEFQNLLSLANIQRWICMMKFLIQNDFIN VLEIIVNSLDNIIGSELLSNLEKGRLENHVTEFLGYVSEARNIVDNRPKYDKQRQVDTRW AGDYAPNQPKLGISVPLAESTGTSGEHDLHSTNAASGEEENMPLVTKALPHRQCCHPETS ARWLNAASIGAFPGGAMRMRLATTVVIGAVVCFAACVVLFHPHRVGVLAAPVKRYLSRNY SS

Transcript Sequence

Transcript ID	Os05t0408200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19923167:19932333:1 gene:Os05g0408200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 9 description:SBP domain containing protein. (Os05t0408200-01)
Sequence	GTCCTAGTCATCGGACGCCGCCCACCTACCCGACTACCCGAGGCAGCCTCTCTCTCCTCC CTCGCCCACCACCACACGACACGAGACGAGAAGACTGATTCATTCGCTCGCGTACACGCC TAGGCGCTCCGAGAATTCGTGAGGGAATCCCGCATCGCCGGAGCCGATCGGCGGCGCCGC GGGCGGGTGGGGGGGGGGGGTTAGGGTTAGGGTTTTGGGGGTGGCCCACCGGGGATGGAC GCCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGTGGGGTGGATGCCGGCGAGCCC GTCTGGGACTGGGGGAACCTCCTCGACTTCGCCGTCCATGACGACGACTCGCTGGTCCTC CCGTGGGGGGACGATTCGATTGGGATCGAGGCCGATCCCGCCGAGGCGGCGCTGCTCCCC CCTGCCCCGTCGCCGCAGCCGGCGGAGGCGGAGGCGGAGGCCGCGGGGCCGGCGTCGCTG CCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTG GTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATG GCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAG CCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGC CGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAG CTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTC ATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTA GATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGA CGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTT TCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGT GAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCC GATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAA AGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACC AAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACA GGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGC CACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCT GGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCC GAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGT AAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCA ACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCA TGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCT AAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATA CTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACAT GAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTG GAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCAT TTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCT GATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATT GGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAAT ATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTG GAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAA AAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAAC ATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGT GATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGA ACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATG CCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGACTAGTGCTAGA TGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCC ACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCA TAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTA CCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGC