Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0407500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19868485:19871283:1 gene:Os05g0407500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIBBERELLIN INSENSITIVE DWARF1 description:Soluble gibberellin receptor, Gibberellin signaling (Os05t0407500-01)
Sequence	ATGGCCGGCAGCGACGAGGTCAACCGCAACGAGTGCAAGACGGTGGTGCCGCTCCACACA TGGGTGCTCATCTCCAACTTCAAGCTGTCGTACAACATTCTGCGGCGGGCGGACGGGACG TTCGAGCGGGACCTCGGGGAGTACCTGGACAGGAGGGTGCCGGCGAACGCGCGGCCGCTG GAGGGGGTGTCGTCGTTCGACCACATCATCGACCAGTCGGTGGGGCTGGAGGTGCGCATC TACCGGGCGGCGGCGGAGGGTGACGCGGAGGAGGGGGCGGCGGCGGTGACGCGGCCCATC CTTGAGTTCCTGACGGACGCGCCAGCGGCGGAGCCGTTCCCGGTGATCATATTCTTCCAC GGCGGCAGCTTCGTGCACTCGTCGGCCAGCTCGACCATCTACGACAGTCTGTGCCGCCGG TTCGTGAAGCTGAGCAAGGGCGTCGTGGTGTCCGTCAACTACCGGCGCGCGCCGGAGCAC CGCTACCCGTGCGCGTACGACGACGGGTGGACCGCGCTCAAGTGGGTCATGTCGCAGCCG TTCATGCGCAGCGGCGGCGACGCGCAGGCCCGCGTGTTCCTCTCCGGCGACAGCTCCGGC GGCAACATCGCCCACCACGTCGCCGTCCGCGCCGCCGACGAGGGCGTCAAGGTCTGCGGC AACATCCTGCTCAACGCCATGTTCGGCGGCACCGAGCGCACGGAGTCGGAGCGGCGGCTC GACGGCAAGTACTTCGTGACGCTCCAGGACAGGGACTGGTACTGGAAGGCGTACCTGCCG GAGGACGCCGACCGGGACCATCCGGCGTGCAACCCGTTCGGCCCGAACGGCCGGCGGCTC GGGGGCCTCCCCTTCGCCAAGAGCCTCATCATCGTGTCGGGCCTGGACCTCACCTGCGAC CGGCAGCTCGCCTACGCCGACGCCCTCCGGGAGGACGGCCACCACGTCAAGGTTGTCCAA TGCGAGAACGCCACGGTGGGGTTCTACCTGTTGCCCAACACCGTCCACTACCACGAGGTC ATGGAGGAGATCTCCGACTTCCTCAACGCTAACCTCTACTACTAG

Peptide Sequence

PEP ID	Os05t0407500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19868485:19871283:1 gene:Os05g0407500 transcript:Os05t0407500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIBBERELLIN INSENSITIVE DWARF1 description:Soluble gibberellin receptor, Gibberellin signaling (Os05t0407500-01)
Sequence	MAGSDEVNRNECKTVVPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPL EGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFH GGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQP FMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRL DGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCD RQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYY

Transcript Sequence

Transcript ID	Os05t0407500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19868485:19871283:1 gene:Os05g0407500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIBBERELLIN INSENSITIVE DWARF1 description:Soluble gibberellin receptor, Gibberellin signaling (Os05t0407500-01)
Sequence	TCTCCCTGTTCGTTGCCTTCTCCGTGCCGAACACCACAGCGCGCGCGCGGGGGGGCGGGT TCGGCTCTCTCGCGAGCTCTGCTCTCTGTCCCTCTCTCTCTCTCGCCGCCTCCTGCCTCG CACACTCGAGATTGGTGGGGTGGATTTGGGGGAGGAGGAGGTGGGGTGGGGTGGGGTGGT TGCTGAGGAGGAGGTGGTGGTGAGAGATCGGGCGGCGGGTTGCCGCCGGAGGAGGTAGAG GGATCCTCGGGGGAGGGCGGTTCTTGGGTCGGGGGACCCCCCCATGGCGTGAGGAGAGGG TGCCCTCCGGGAGATCTTGCGGGGCGGGTGTGTGGTGTTGCTAGCTGAGGCTGTTGGGTG GGTACCCCCGAGCGGCCGGGGAATCTCCTCCCTTCTCGAGCGACCGCCCGCGTCGCTCCG CCATGGCCGGCAGCGACGAGGTCAACCGCAACGAGTGCAAGACGGTGGTGCCGCTCCACA CATGGGTGCTCATCTCCAACTTCAAGCTGTCGTACAACATTCTGCGGCGGGCGGACGGGA CGTTCGAGCGGGACCTCGGGGAGTACCTGGACAGGAGGGTGCCGGCGAACGCGCGGCCGC TGGAGGGGGTGTCGTCGTTCGACCACATCATCGACCAGTCGGTGGGGCTGGAGGTGCGCA TCTACCGGGCGGCGGCGGAGGGTGACGCGGAGGAGGGGGCGGCGGCGGTGACGCGGCCCA TCCTTGAGTTCCTGACGGACGCGCCAGCGGCGGAGCCGTTCCCGGTGATCATATTCTTCC ACGGCGGCAGCTTCGTGCACTCGTCGGCCAGCTCGACCATCTACGACAGTCTGTGCCGCC GGTTCGTGAAGCTGAGCAAGGGCGTCGTGGTGTCCGTCAACTACCGGCGCGCGCCGGAGC ACCGCTACCCGTGCGCGTACGACGACGGGTGGACCGCGCTCAAGTGGGTCATGTCGCAGC CGTTCATGCGCAGCGGCGGCGACGCGCAGGCCCGCGTGTTCCTCTCCGGCGACAGCTCCG GCGGCAACATCGCCCACCACGTCGCCGTCCGCGCCGCCGACGAGGGCGTCAAGGTCTGCG GCAACATCCTGCTCAACGCCATGTTCGGCGGCACCGAGCGCACGGAGTCGGAGCGGCGGC TCGACGGCAAGTACTTCGTGACGCTCCAGGACAGGGACTGGTACTGGAAGGCGTACCTGC CGGAGGACGCCGACCGGGACCATCCGGCGTGCAACCCGTTCGGCCCGAACGGCCGGCGGC TCGGGGGCCTCCCCTTCGCCAAGAGCCTCATCATCGTGTCGGGCCTGGACCTCACCTGCG ACCGGCAGCTCGCCTACGCCGACGCCCTCCGGGAGGACGGCCACCACGTCAAGGTTGTCC AATGCGAGAACGCCACGGTGGGGTTCTACCTGTTGCCCAACACCGTCCACTACCACGAGG TCATGGAGGAGATCTCCGACTTCCTCAACGCTAACCTCTACTACTAGTACATATACAGCC CCTCTCCCTCTCCCCCCTCGCTGATCGTCGTCTCCAACACAAATACTCCTTATAGGGAAG ATGGTAATTCAGCTTGACTTTGTTATAGTACCTACTACTACTACTACTACTACCTCCTAT ACTACTGCTGCTGCTTGGGATCGCAATGCCGTCGTCTGCTCTTGTGTGGCGAAGGAGAAG CTAGCTCCATGCTGTCTGATCAGCTCTAATCAAATGGTGACTCGGTTGCGTCGAGGAAGA AGAAGAAAGTCGTCCGTCGTCGTCGTCCTTGTTCCACTAATCATCGTTCATCCTTTTCTT TTTTTGTGGTTTGGATCGTTCTTTGATCCATGTTTTCCATGTTTTGCCTGGGGTCAGTGT AGTCAAGACAAGTTGAGGGTAGTTCCATGTCTGTCATGCATGCCTCCATTAGTACTACTA CTGTTGTGACTTTGGTTGATGGAGAGAAGAAGCATGTTTTTTTTTCTTTTAATCTCGCAT TCCATCCATCTTCTCCATGTACTCCAAAGAGAGGAAAGTTGCTATCTAACGTTATGTGTA CAGTGATCGATCAACAAGGAGATTTGAGGAGGCATGCCCCTTTTGTTGCTGTTGATGTTC TAGTTTTATCTTCTTTCTTGTTAACAGGATTGGATGGTGCTCTCTTGCTCACTCTC