Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0406800-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:19829080:19830856:1 gene:Os05g0406800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-01);Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-02)
Sequence	ATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAG GGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGAT ATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCC GGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGG TCGCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAG CTGTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGG AACCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTC GGCGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATC CCGGCGTCGATCGCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTC ACCGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTCGACCTCAAGCAC AACGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCG GCGAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTAC CTCGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCG CTGTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGAC GTGACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTC CTCGCCGGCGTGGGGCAGCTGTACCTGAATAACAACCGGTTCACCGGCGAGGTGCCGGCG CGGCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAAC TTCCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGC CTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCG ACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAA

Peptide Sequence

PEP ID	Os05t0406800-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:19829080:19830856:1 gene:Os05g0406800 transcript:Os05t0406800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-01);Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-02)
Sequence	MMAVLARLGVIVVLWAVVAEGILDPVDFLALQAVRRSLDDMPGSSFFEAWDFTADPCGFP GVFCDGNKVSALALGDPRAGSPGLSGRLDQALGRLSALTELSLVPGRVEGELPESLSSCR NLRFLAVSKNLISGQIPDGLGGLSNLRTLDVSFNQISGTIPASIATLPSITNLILCHNHL TGGIPSFPDSSPLIRLDLKHNDLSGGVPNLPSTLQYLSLSANRLTGTVDSVLPRLTRLNY LDLSMNQLDGPIPASVFTLPLSVLQLQRNFFSGLLQPANDVTIQVVDLSYNRFWGPVSPL LAGVGQLYLNNNRFTGEVPARLVQELVGSGGLQVLYLQHNFLTGIEISPASSLPSSVSLC LMYNCMVPPVYAPCPLKAGSTNTRPADQCPEWRG

Transcript Sequence

Transcript ID	Os05t0406800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19829080:19830856:1 gene:Os05g0406800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-01);Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-02)
Sequence	GCTTAAAAGATTCCCCACACCACCTCCTCTCACCTCGCGCCACGAGCGTTGATCGGTGCT TTTCATTGTTCTTCCTTGCTGCAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGAT GATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGG GATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATAT GCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGG GGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTC GCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCT GTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAA CCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGG CGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCC GGCGTCGATCGCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCAC CGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTCGACCTCAAGCACAA CGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGC GAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCT CGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCT GTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGT GACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCT CGCCGGCGTGGGGCAGCTGTACCTGAATAACAACCGGTTCACCGGCGAGGTGCCGGCGCG GCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTT CCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCT CATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGAC GAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACA ACGCCGACGCCATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAA TGGAGGAGATTGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGT TCCAATGTGGATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACA AGAAGTAAGTTCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGT GTTTAGGTGGTGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACA TTGGCTCTTGATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATG ATGATGGTGGTGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAGC ATAGTATCACAAGCATTCGCTGTGCTTCATTTTAGTT