Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0405900-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:19771098:19774996:1 gene:Os05g0405900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18F description:WD40 repeat-like domain containing protein. (Os05t0405900-01);Hypothetical conserved gene. (Os05t0405900-02);Conserved hypothetical protein. (Os05t0405900-03)
Sequence	GGCAAACTTCCCTCTAGCGTGCATCCGCTGGAAGCTGACAATGCTGGAATGGTTGTCATC AAGGATTTTATCTCGAAAGAAATCATATCTCAGTTTAGGGCTCACACAAGTCCCATATCT GCTCTTTGTTTTGACCCTAGTGGAACTCTGTTGGTCACAGCCTCCGTTCATGGCCATAAC ATAAATGTTTTCAGGATCATGCCAACCGTAATAGCTAACAGCTCAGGCTCTATACGCTAT GATTGGACAGCATCTCATGTCCACCTTTACAAACTGTATCGTGGCATGACAGCAGCTGTC ATCCAGGATATCTCTTTTAGCCATTTTAGCCAGTGGATATCTATTGTTTCATCCCGAGGT ACTTGCCATATTTTTACATTGTCTCCTTTTGGCGGTGATGCGAGTCTGCTGCCACAGAAT TCTCACAGTGATGGGCTACCCCTTGCCCCATGTCAATCAAGGCCATGGTGGTCAAAGCCA TCATTCCTTATGGATCATCAGCTTCATCCAGCTCCTTCAACTGTAACTAATTCTGTAGTC AGTAGGATAAAAAACAGTTCTTCTGGTTGGCTAAATACTGTTAGTAATGTGGCTGCTTCT GCAAGTGGGAAACTATCTGTACCATCTGGCGCTGTTACTGCTGTTTTCCACAATTCCAAC TATGAAGGTTCATTGCCAGTTCCATCAAAGGCTAATGCCATGGAGCATCTATTGGTGTAT TCACCATCTGGCCATGTTATTCAACATGAACTACTGCCTTCAGGTTCTGAATCCTCTGAT AGCAGTCCAATAGTTGGGCCTGGTTCCTTGCAGATCCAAGATGATGAGTTGCATGTTACT GCTGAACCGACTCAGTGGTGGGATGTATGCCGTAGGACAAACTGGCCAGAAAGGGACGAA AACATTGCAAACATAGTCTTCCATAATCAACGAAATAGTATGATGGCAATGGATGCTTCT GACTGTGATAGTGAGCATTCAGATTCCGTTCCATCAGATGGTATTTCTGGGAAAGAGATG ATGAGATCTCGAGAAAGATCAAGTTGGTACCTCTCAAATGCAGAGGTACAGATAAGTTCA TGGAGGATTCCCATTTGGCAGAAATCAAAGATTTTCTTCTATGTGATAGATCAACCACCT GCAAAATCAGGGGAATCTCTTAGCTCTAGTGGGGGAGAGATTGAGATTGAGAAGCTGCCT CTGCATGAGGTTGAACTTCGGAGGAGGGAATTGCTCCCTGTATTCAAGCAGTTCCACTAT TCTGAACAGAACTTCAGTGACAGGAATCTTGCAATAGGACGGTTTCAGAATGCATTGACA TACATCGACAAGGATAATGGTGCTCATGGATCCAAGGCGGGGTTCCCTATATCTGGATTT TACAGTGATATGAGGAAAATGCAGAACATGAATGGTTTAGAGGGGCAGTTATTGTTGGAA CCTATCACTAATGATTTACAACCAATGGAAAAATGCAATTCTGTTCAATCTCCTAAAGTG GCAAATTTTACTGCCCTTCACAATGTAGATAATGAGAGCATGAACCATGTTTCAACAGCA ACTGGAGCAACCACATCAGTCACAACAGTGGACACTTTACCTTCAACCATCAGACCATTG AGCAGCTACTCCCTCTTGGATGGATCTCTTGATGATGGATTACCATCACCTGCAAGTAAT GTATCATTCAGGCCTCAGATAACCAACAATTCTTCAGTAAGCAATGGTACAATGACTGAC ATCTCAAATGGGTGTCTCACGAGCATCAATTCTGGACAGAATGAAGCATCTGATTCTCAC AACTCAGTGGAGTTTACCCAGTATTTCCAAGAGGGCTATTGTAAAATATCAGAACTCGAT GACTGCCGTGAGTTAACTGAAGCTGTTACTGATGCTGACAGCAGCAGCAGCCACTGCGAG AGAGAGAAGCCCGAGGAAGATGGGGATAACGATGACATGCTTGGGGCTGTTTTTGCCTTC AGCGAAGAAGGTTGA

Peptide Sequence

PEP ID	Os05t0405900-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:19771098:19774996:1 gene:Os05g0405900 transcript:Os05t0405900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18F description:WD40 repeat-like domain containing protein. (Os05t0405900-01);Hypothetical conserved gene. (Os05t0405900-02);Conserved hypothetical protein. (Os05t0405900-03)
Sequence	GKLPSSVHPLEADNAGMVVIKDFISKEIISQFRAHTSPISALCFDPSGTLLVTASVHGHN INVFRIMPTVIANSSGSIRYDWTASHVHLYKLYRGMTAAVIQDISFSHFSQWISIVSSRG TCHIFTLSPFGGDASLLPQNSHSDGLPLAPCQSRPWWSKPSFLMDHQLHPAPSTVTNSVV SRIKNSSSGWLNTVSNVAASASGKLSVPSGAVTAVFHNSNYEGSLPVPSKANAMEHLLVY SPSGHVIQHELLPSGSESSDSSPIVGPGSLQIQDDELHVTAEPTQWWDVCRRTNWPERDE NIANIVFHNQRNSMMAMDASDCDSEHSDSVPSDGISGKEMMRSRERSSWYLSNAEVQISS WRIPIWQKSKIFFYVIDQPPAKSGESLSSSGGEIEIEKLPLHEVELRRRELLPVFKQFHY SEQNFSDRNLAIGRFQNALTYIDKDNGAHGSKAGFPISGFYSDMRKMQNMNGLEGQLLLE PITNDLQPMEKCNSVQSPKVANFTALHNVDNESMNHVSTATGATTSVTTVDTLPSTIRPL SSYSLLDGSLDDGLPSPASNVSFRPQITNNSSVSNGTMTDISNGCLTSINSGQNEASDSH NSVEFTQYFQEGYCKISELDDCRELTEAVTDADSSSSHCEREKPEEDGDNDDMLGAVFAF SEEG

Transcript Sequence

Transcript ID	Os05t0405900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19771098:19774996:1 gene:Os05g0405900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18F description:WD40 repeat-like domain containing protein. (Os05t0405900-01);Hypothetical conserved gene. (Os05t0405900-02);Conserved hypothetical protein. (Os05t0405900-03)
Sequence	CTGGCAAACTTCCCTCTAGCGTGCATCCGCTGGAAGCTGACAATGCTGGAATGGTTGTCA TCAAGGATTTTATCTCGAAAGAAATCATATCTCAGTTTAGGGCTCACACAAGTCCCATAT CTGCTCTTTGTTTTGACCCTAGTGGAACTCTGTTGGTCACAGCCTCCGTTCATGGCCATA ACATAAATGTTTTCAGGATCATGCCAACCGTAATAGCTAACAGCTCAGGCTCTATACGCT ATGATTGGACAGCATCTCATGTCCACCTTTACAAACTGTATCGTGGCATGACAGCAGCTG TCATCCAGGATATCTCTTTTAGCCATTTTAGCCAGTGGATATCTATTGTTTCATCCCGAG GTACTTGCCATATTTTTACATTGTCTCCTTTTGGCGGTGATGCGAGTCTGCTGCCACAGA ATTCTCACAGTGATGGGCTACCCCTTGCCCCATGTCAATCAAGGCCATGGTGGTCAAAGC CATCATTCCTTATGGATCATCAGCTTCATCCAGCTCCTTCAACTGTAACTAATTCTGTAG TCAGTAGGATAAAAAACAGTTCTTCTGGTTGGCTAAATACTGTTAGTAATGTGGCTGCTT CTGCAAGTGGGAAACTATCTGTACCATCTGGCGCTGTTACTGCTGTTTTCCACAATTCCA ACTATGAAGGTTCATTGCCAGTTCCATCAAAGGCTAATGCCATGGAGCATCTATTGGTGT ATTCACCATCTGGCCATGTTATTCAACATGAACTACTGCCTTCAGGTTCTGAATCCTCTG ATAGCAGTCCAATAGTTGGGCCTGGTTCCTTGCAGATCCAAGATGATGAGTTGCATGTTA CTGCTGAACCGACTCAGTGGTGGGATGTATGCCGTAGGACAAACTGGCCAGAAAGGGACG AAAACATTGCAAACATAGTCTTCCATAATCAACGAAATAGTATGATGGCAATGGATGCTT CTGACTGTGATAGTGAGCATTCAGATTCCGTTCCATCAGATGGTATTTCTGGGAAAGAGA TGATGAGATCTCGAGAAAGATCAAGTTGGTACCTCTCAAATGCAGAGGTACAGATAAGTT CATGGAGGATTCCCATTTGGCAGAAATCAAAGATTTTCTTCTATGTGATAGATCAACCAC CTGCAAAATCAGGGGAATCTCTTAGCTCTAGTGGGGGAGAGATTGAGATTGAGAAGCTGC CTCTGCATGAGGTTGAACTTCGGAGGAGGGAATTGCTCCCTGTATTCAAGCAGTTCCACT ATTCTGAACAGAACTTCAGTGACAGGAATCTTGCAATAGGACGGTTTCAGAATGCATTGA CATACATCGACAAGGATAATGGTGCTCATGGATCCAAGGCGGGGTTCCCTATATCTGGAT TTTACAGTGATATGAGGAAAATGCAGAACATGAATGGTTTAGAGGGGCAGTTATTGTTGG AACCTATCACTAATGATTTACAACCAATGGAAAAATGCAATTCTGTTCAATCTCCTAAAG TGGCAAATTTTACTGCCCTTCACAATGTAGATAATGAGAGCATGAACCATGTTTCAACAG CAACTGGAGCAACCACATCAGTCACAACAGTGGACACTTTACCTTCAACCATCAGACCAT TGAGCAGCTACTCCCTCTTGGATGGATCTCTTGATGATGGATTACCATCACCTGCAAGTA ATGTATCATTCAGGCCTCAGATAACCAACAATTCTTCAGTAAGCAATGGTACAATGACTG ACATCTCAAATGGGTGTCTCACGAGCATCAATTCTGGACAGAATGAAGCATCTGATTCTC ACAACTCAGTGGAGTTTACCCAGTATTTCCAAGAGGGCTATTGTAAAATATCAGAACTCG ATGACTGCCGTGAGTTAACTGAAGCTGTTACTGATGCTGACAGCAGCAGCAGCCACTGCG AGAGAGAGAAGCCCGAGGAAGATGGGGATAACGATGACATGCTTGGGGCTGTTTTTGCCT TCAGCGAAGAAGGTTGAACCTAATAATATACTCTGCTTTTACATAGAGAATGGAAAACAG TGCCCGTGATATTACCTAGAAAATGGTGGATTTCCATTAGGCTTTCGTGGAATAAATTGG TGCTGAGATGATAATCTACTATTTGGTACATATTAGAAAGGTGAAGCTTGTGCTCGATAT CCATTTGTGAGAAGTTTTACTCAGGAATTGAGATCAAGATCCTTCCTTCCGGGCCATTAA CTAATCCACGGATCCACGTTAAGGGGAGCTTGGTGTTGTCGAGAAGTTGCTGCTGCCTGC CGCAACACTGCCCCTTTTCCGTTGCTTTGTACATACTGTAAAAGACCATTTGTTTTGTGA AATACGTCTCTGGAACATTGGACGGTCCAACTTCCTTGGCAGCCATATTTGTTGACTGCT TCCTGCCAAGGCCTGTTAATGTTCCTTGTTTATTTGTACAGTCTTTTCTGTTTCATTAAG GAAAAAGAAAATCTAGCAAGGATTAATGTGACATAACTGTATAAACATTCAGTAAAGAAT TTCCGTTTACGAAG