Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0399100-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:19409766:19413589:1 gene:Os05g0399100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Endo-1,3;1,4-beta-D-glucanase. (Os05t0399100-01);Similar to Endo-1,3;1,4-beta-D-glucanase. (Os05t0399100-02)
Sequence	ATGGCGAGCCCGCAGTGCTGCGCGAACCCACCGACGCTGAACCCGGCCGGCGGGGAGGGG AAGGTGGTGGAGAGCTTCGGCGGGATCAAGGCGTACGTCGCCGGCGCCGCGGAGTCCAAG GCCGCCGTCGTCCTCATCTCCGATGTCTTCGGGTTTGAAGCGCCGAACCTGAGGAAGATA GCCGACAAAGTTGCCTCGTCTGGATACTTTGTTGTGGTGCCAGATTTCTTACATGGGGAT CCTTTAGTACCTGAAAGTACTGAGAAACCGTTTCAAATGTGGATAAAAGAACATGGCCCG GACAAAGCATTTGAAGAGGCGAAACCAATTATTGCCGCTCTGAAGGAGAAAGGAGTGTCT AGTATTGGGGCTGTAGGTTATTGCTGGGGTGCAAAGGTGGTGGTAGAGTTAGTGAAAGCT CATGAGATCCAGGCTGCTGTGATGTGTCACCCCTCTTTTGTGACTGTTGATGATATGAAA GAGGTCAAATGCCCAATTGCTATACTTGGAGCTGAAATTGATCGTATGTCCCCACCAGAA GTGGTGAAGCAGTTCGAGCAGGTTCTTTCTTCAAAGTCAGGGATTGGCCACTTTGTCAAG ATCTTCCCTGGGGTTGAACATGGATGGACTGTGAGATACAAGAATGATGATGCAGCTGCT GTCAAGAGCGCCGAGGAAGCCCTGGCGGACATGATTGACTGGTTTAATAAGAACCTGAAG TGA

Peptide Sequence

PEP ID	Os05t0399100-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:19409766:19413589:1 gene:Os05g0399100 transcript:Os05t0399100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Endo-1,3;1,4-beta-D-glucanase. (Os05t0399100-01);Similar to Endo-1,3;1,4-beta-D-glucanase. (Os05t0399100-02)
Sequence	MASPQCCANPPTLNPAGGEGKVVESFGGIKAYVAGAAESKAAVVLISDVFGFEAPNLRKI ADKVASSGYFVVVPDFLHGDPLVPESTEKPFQMWIKEHGPDKAFEEAKPIIAALKEKGVS SIGAVGYCWGAKVVVELVKAHEIQAAVMCHPSFVTVDDMKEVKCPIAILGAEIDRMSPPE VVKQFEQVLSSKSGIGHFVKIFPGVEHGWTVRYKNDDAAAVKSAEEALADMIDWFNKNLK

Transcript Sequence

Transcript ID	Os05t0399100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19409766:19413589:1 gene:Os05g0399100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Endo-1,3;1,4-beta-D-glucanase. (Os05t0399100-01);Similar to Endo-1,3;1,4-beta-D-glucanase. (Os05t0399100-02)
Sequence	GCGACCAGGAGAAATTTCAGCAGGAGCAGGCGATGGCGAGCCCGCAGTGCTGCGCGAACC CACCGACGCTGAACCCGGCCGGCGGGGAGGGGAAGGTGGTGGAGAGCTTCGGCGGGATCA AGGCGTACGTCGCCGGCGCCGCGGAGTCCAAGGCCGCCGTCGTCCTCATCTCCGATGTCT TCGGGTTTGAAGCGCCGAACCTGAGGAAGATAGCCGACAAAGTTGCCTCGTCTGGATACT TTGTTGTGGTGCCAGATTTCTTACATGGGGATCCTTTAGTACCTGAAAGTACTGAGAAAC CGTTTCAAATGTGGATAAAAGAACATGGCCCGGACAAAGCATTTGAAGAGGCGAAACCAA TTATTGCCGCTCTGAAGGAGAAAGGAGTGTCTAGTATTGGGGCTGTAGGTTATTGCTGGG GTGCAAAGGTGGTGGTAGAGTTAGTGAAAGCTCATGAGATCCAGGCTGCTGTGATGTGTC ACCCCTCTTTTGTGACTGTTGATGATATGAAAGAGGTCAAATGCCCAATTGCTATACTTG GAGCTGAAATTGATCGTATGTCCCCACCAGAAGTGGTGAAGCAGTTCGAGCAGGTTCTTT CTTCAAAGTCAGGGATTGGCCACTTTGTCAAGATCTTCCCTGGGGTTGAACATGGATGGA CTGTGAGATACAAGAATGATGATGCAGCTGCTGTCAAGAGCGCCGAGGAAGCCCTGGCGG ACATGATTGACTGGTTTAATAAGAACCTGAAGTGAATTTGACATATCCGCTGTCCACGAT CGGTTTGTGTATTGCTCATGTTTCATCGCAAGCATCCTGAATTTACGGTTGAGTAGCCTT CCCATTATGTTTGTGCTAGTAGTGTATATGCTTTGCTTGTGTTAGGAATTTGCTTTGTGT CAACCTGAACTTCCACTTCTGTAATAAAAATGGATGGGCGAGCATCTTCTCGGTTTGGTG GTCACGACTGACGAGAACATATCATTTTGTTACATCGAACTTTTGAAACTTTGC