Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0398800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19398909:19403514:1 gene:Os05g0398800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1). (Os05t0398800-01)
Sequence	ATGGCGGATGCTTGGGCGGCGTCCCCTCCATCTCCTACGGCTCCTTCGCCTTTCGCCGCG GACGACCTCGTCGACGCGCGGCTCGCGCCGTGGCCGCCGTTCGCTCCGTGGCCGGCGCCC GGGCAGCTCCACCACAACCGCCGCGGCGGCGGGCACCCGAACCCGCTCTTCACCATCCTG CCGGCCTCGGCGCTGGCAATAGGGGTCGTGCTGCTTGTCGCCGTGGTCGTCATCCTGGTG ATGACGCGTCGGTGGAAGCCCGGGACGGTGGACGGCGCCGGCGGCGCCAGCTGCAACGGC GACAAGCCTGGCGGCGCCCCCGCGTCCAGCTGCGGCAGCAGCGTCCGCGGCTACAACAAC TCCAGGTACTACGCCGCCGCCGCCGCCGGGTGCATATATGGCGGAAGGCTGGGTTTCTCG GTGCAGCCGCGGAACCGCGGCGCGCAAGTGTTCACGTACCGGGAGCTGGAGAGCGCGACG GACGGGTTCAGCGAGTGCAACGTGGTGGGCCGCGGCGCGTACGGCGTGGTCTTCCGCGGC CGGCTCGGCGACGGCACCACGGCCGCCATCAAGCGGCTCAAGATGGACGGCCGGCGCGAG GGCGAGCGCGAGTTCCGCATCGAGGTCGACCTGCTGAGCCGGATGCACTCGCCGTACCTG GTGGGGTTGCTGGGCTACTGCGCCGACCAGAGCCACCGTCTGCTGGTGTTCGAGTTCATG CCCAACGGCAGCCTCAAGAGCCACCTCCACCGGCGCGCGCTGGCGCCGGCGGAGCAGCCG CCGCCGCTGGACTGGCAGACGCGGCTGGGCATCGCGCTGGACTGCGCCCGCGCGCTGGAG TTCCTCCACGAGCACAGCTCCCCCGCCGTGATCCACCGCGACTTCAAGTGCAGCAACATC CTCCTCGACCACAACTACCGCGCCCGCGTCTCCGACTTCGGCATGGCCAAGCTCGGCTCC AACAAGGCCAATGGCCAGGTCACCACCCGCGTCCTCGGCACCACCGGCTACCTCGCCCCA GAGTACGCGTCGACGGGGAAGCTGACGACAAAGTCGGACGTGTACAGCTACGGCGTCGTG CTCCTCGAGCTGCTCACTGGGCGGGTGCCCGTCGACACGAAGCGGCCGCCGGGACAGCAC GTACTCGTCTCGTGGGCCCTTCCGCGGCTGACGAACCGCGAGAAGCTCGTGCAGATGGTG GATCCTGCCCTGATAGGCCAGTTCTCCCTCAAAGATCTGGTCCAGGTGGCCGCCATCACG GCGATGTGCATACAGACGAAGGCGGACTACCGGCCGCTGATGACGGACGTGGTGCAGTCG CTGATCCCCATCGTGAAGAGCCCACTCATGTCCTGCACCTCCACGCCGCTGAGGCCCGCG CACGGGCACCACCACGTCGTCTACATGAGCCCGAGCAGGGGCTCTTCCAACGGCGGTGCC CTGGAAACGCGATGCGTCATGCACGGCTTGGATTGA

Peptide Sequence

PEP ID	Os05t0398800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19398909:19403514:1 gene:Os05g0398800 transcript:Os05t0398800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1). (Os05t0398800-01)
Sequence	MADAWAASPPSPTAPSPFAADDLVDARLAPWPPFAPWPAPGQLHHNRRGGGHPNPLFTIL PASALAIGVVLLVAVVVILVMTRRWKPGTVDGAGGASCNGDKPGGAPASSCGSSVRGYNN SRYYAAAAAGCIYGGRLGFSVQPRNRGAQVFTYRELESATDGFSECNVVGRGAYGVVFRG RLGDGTTAAIKRLKMDGRREGEREFRIEVDLLSRMHSPYLVGLLGYCADQSHRLLVFEFM PNGSLKSHLHRRALAPAEQPPPLDWQTRLGIALDCARALEFLHEHSSPAVIHRDFKCSNI LLDHNYRARVSDFGMAKLGSNKANGQVTTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV LLELLTGRVPVDTKRPPGQHVLVSWALPRLTNREKLVQMVDPALIGQFSLKDLVQVAAIT AMCIQTKADYRPLMTDVVQSLIPIVKSPLMSCTSTPLRPAHGHHHVVYMSPSRGSSNGGA LETRCVMHGLD

Transcript Sequence

Transcript ID	Os05t0398800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19398909:19403514:1 gene:Os05g0398800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1). (Os05t0398800-01)
Sequence	ATCTCTCTCTCTCTCTCCTTCGGCTCATTCGTCACTGTTCCACCGCCGGCTTCGCCAGTT GCCTGGCCGTGTCCGGCCACTCCCAGGAGGAGGAGGAGGACAATGGCGGATGCTTGGGCG GCGTCCCCTCCATCTCCTACGGCTCCTTCGCCTTTCGCCGCGGACGACCTCGTCGACGCG CGGCTCGCGCCGTGGCCGCCGTTCGCTCCGTGGCCGGCGCCCGGGCAGCTCCACCACAAC CGCCGCGGCGGCGGGCACCCGAACCCGCTCTTCACCATCCTGCCGGCCTCGGCGCTGGCA ATAGGGGTCGTGCTGCTTGTCGCCGTGGTCGTCATCCTGGTGATGACGCGTCGGTGGAAG CCCGGGACGGTGGACGGCGCCGGCGGCGCCAGCTGCAACGGCGACAAGCCTGGCGGCGCC CCCGCGTCCAGCTGCGGCAGCAGCGTCCGCGGCTACAACAACTCCAGGTACTACGCCGCC GCCGCCGCCGGGTGCATATATGGCGGAAGGCTGGGTTTCTCGGTGCAGCCGCGGAACCGC GGCGCGCAAGTGTTCACGTACCGGGAGCTGGAGAGCGCGACGGACGGGTTCAGCGAGTGC AACGTGGTGGGCCGCGGCGCGTACGGCGTGGTCTTCCGCGGCCGGCTCGGCGACGGCACC ACGGCCGCCATCAAGCGGCTCAAGATGGACGGCCGGCGCGAGGGCGAGCGCGAGTTCCGC ATCGAGGTCGACCTGCTGAGCCGGATGCACTCGCCGTACCTGGTGGGGTTGCTGGGCTAC TGCGCCGACCAGAGCCACCGTCTGCTGGTGTTCGAGTTCATGCCCAACGGCAGCCTCAAG AGCCACCTCCACCGGCGCGCGCTGGCGCCGGCGGAGCAGCCGCCGCCGCTGGACTGGCAG ACGCGGCTGGGCATCGCGCTGGACTGCGCCCGCGCGCTGGAGTTCCTCCACGAGCACAGC TCCCCCGCCGTGATCCACCGCGACTTCAAGTGCAGCAACATCCTCCTCGACCACAACTAC CGCGCCCGCGTCTCCGACTTCGGCATGGCCAAGCTCGGCTCCAACAAGGCCAATGGCCAG GTCACCACCCGCGTCCTCGGCACCACCGGCTACCTCGCCCCAGAGTACGCGTCGACGGGG AAGCTGACGACAAAGTCGGACGTGTACAGCTACGGCGTCGTGCTCCTCGAGCTGCTCACT GGGCGGGTGCCCGTCGACACGAAGCGGCCGCCGGGACAGCACGTACTCGTCTCGTGGGCC CTTCCGCGGCTGACGAACCGCGAGAAGCTCGTGCAGATGGTGGATCCTGCCCTGATAGGC CAGTTCTCCCTCAAAGATCTGGTCCAGGTGGCCGCCATCACGGCGATGTGCATACAGACG AAGGCGGACTACCGGCCGCTGATGACGGACGTGGTGCAGTCGCTGATCCCCATCGTGAAG AGCCCACTCATGTCCTGCACCTCCACGCCGCTGAGGCCCGCGCACGGGCACCACCACGTC GTCTACATGAGCCCGAGCAGGGGCTCTTCCAACGGCGGTGCCCTGGAAACGCGATGCGTC ATGCACGGCTTGGATTGATTAGCCATATGCATCTCGATCAGCTGCAGATATATAATGCTA GCTCCTATGTATTACTACGTCTCGATCGTCGATCGCTTGCTTGGAGTACTTTGAGCCAGG CAGATGGGGAAGAAGAGATGGATGGTCAGCTTGTCAAGCTGCTCGATCGGAGGGAGATTG CTGGCACTACTCCCAGCTGTGTATAGAACGGTACCAGTACCACTTCACCAAGCTCATCAC GGCTTGCTTGCAAGACATCCTTGCAAATGCAATTGCAGATTTGCTGTAGCAGTACATCAT CACGTGCGTACGATTGTACTATTTATTAGGGACAGTTGTACGACGATTCCTTGTTCTTTT GTACGAAATCATATATATTCATATATTCCTGTATAAGATAGTAATTAAGATGGAAAAAAT ACAATAAATGGATCATCCTTTTTC