Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0397700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19346175:19353385:-1 gene:Os05g0397700 gene_biotype:protein_coding transcript_biotype:protein_coding description:SecY protein family protein. (Os05t0397700-01)
Sequence	ATGCCGCACTCACTCTCCCTCCTGCTCGCGCCCAGCCGCGCGCTCTCCCTCTCCTCCCCA CCGCTCCGCCTCGCCCCAACGCACCCACCACTTCGCCTGCACCACGACGGCGGCCACCTC CTCGTGGGCACGACGAGGCGGCAGGCTCCCTCGCCTCGCCGCCGCCGTCTCCATGCCGCC AGGGCTTCCGCGCCGTCCGCCGCCGCGGCGTCCCCCGTAGGGCCTGCGGGCGAGGGTGGC GAGGTGGGGGGCAGGGCGAGGAAGGCGGCGGGGTACCGGAACAGGTTCCTGGACCTGGCG CGGCTGGGGGCCGTGGCGGAGAGCGCGGCGGAGGCGCTCTTCCGCAGCGAGATTCGCCGG CGGCTGGCCGTCACGGCCGTGCTCATCCTGCTCAGCCGCGTCGGCTACTTCGTCCCGCTT CCCGGGTTCGACCGACGGCTCATCCCCGATTCCTACCTCAGCTTTGCACCCCTTCCTGCA GATGACCTCGGTGATTTTTCATCCGAATTGAAGCTGTCATTTTTCCAGCTCGGAATCAGT CATCAGATTTCAGCATCTATTGTCATGCAGGTTCTCTGTCATGTTCTTCCATCACTTGAA AAACTACGAAAGGAAGGGTTAGATGGACATGAGAAGATCAAAGGCTATATTTGGTGGCTG TCGCTGGGTTTTGCACTTGTGGCGGCTTTTACAGTGTCATGCTACTCACTGCAATATTCT ATATATGCTGCAAGTTACAGAGTTAAGCATGTAATGATAACAAGCCTTTTCCTTGTTCTT GGTGCAATGACAATGACATGGATCTGTGACACTATATCGGAATCTGGATTTGGACATGGC TCTTCCTTGATTATCTGTGTGGGAATATTGACTGGTTATACAGACACACTCCACAAGATG TTAACTCAATTTTCAGGAAATTGGTACAGCTGTTGGCCCTACATCTTGGGGATAGCTGGG ACTTTTATTTTGGTTACCATGGGAGCAGTACTGGTGACTGAAGGGTGTAGGAAGATAAAG CTTCAGTACTATGGATTTAAATTGGCTTCTGGTGCAAGGAGTGAGAGCTCCCCAGTTACA GAGGTAGAGCCATATATCCCTTTTAACATAAATCCAACTGGGATGCAGCCTTTGCTTACC ACCTCATACTTATTAGCTTTTCCAAGCATTATGGCCAGCATTTTTGGTACGCAATTTTGG GAAAGTTTGAAGGAAACGTTGAATCCAAAGACTTCAGTTGGTGGTGGTCCATGGGTTTAT TATTTGACATATGCATTTCTTGTCTTCGTCTTCAATATTTTTGACATTGCAAACTTGCCA AAAGAGATATCTGACTACCTGAATAAAATGAGTGCTAGAGTACCGAAGATAAAGCCTGGA AGAGCAACAGTAGAGTATCTTACAAAAATACAAACATCTACACGTTTCTGGGGGGGTATA TTGCTGAGCTTGTTGGCGACTTCCTCTTTATTACTTGACCGATATCTCAGGCAGATAAAT GAGGGATTTTCTATAGGTTTCACGTCGGTGTTGATTATTGTGGGCTCAATCATCGAGCTG AGAAGGTCTTATCAAGCATACAATGTGATGCCAGCACTAAGCAAAGTTCTAAGGAGATAT GGTGCCTGA

Peptide Sequence

PEP ID	Os05t0397700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19346175:19353385:-1 gene:Os05g0397700 transcript:Os05t0397700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SecY protein family protein. (Os05t0397700-01)
Sequence	MPHSLSLLLAPSRALSLSSPPLRLAPTHPPLRLHHDGGHLLVGTTRRQAPSPRRRRLHAA RASAPSAAAASPVGPAGEGGEVGGRARKAAGYRNRFLDLARLGAVAESAAEALFRSEIRR RLAVTAVLILLSRVGYFVPLPGFDRRLIPDSYLSFAPLPADDLGDFSSELKLSFFQLGIS HQISASIVMQVLCHVLPSLEKLRKEGLDGHEKIKGYIWWLSLGFALVAAFTVSCYSLQYS IYAASYRVKHVMITSLFLVLGAMTMTWICDTISESGFGHGSSLIICVGILTGYTDTLHKM LTQFSGNWYSCWPYILGIAGTFILVTMGAVLVTEGCRKIKLQYYGFKLASGARSESSPVT EVEPYIPFNINPTGMQPLLTTSYLLAFPSIMASIFGTQFWESLKETLNPKTSVGGGPWVY YLTYAFLVFVFNIFDIANLPKEISDYLNKMSARVPKIKPGRATVEYLTKIQTSTRFWGGI LLSLLATSSLLLDRYLRQINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPALSKVLRRY GA

Transcript Sequence

Transcript ID	Os05t0397700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19346175:19353385:-1 gene:Os05g0397700 gene_biotype:protein_coding transcript_biotype:protein_coding description:SecY protein family protein. (Os05t0397700-01)
Sequence	GCCGGATTTTGCAATCCCATCGGCCGGCAGAGCGCGACGGCGGCAGCTCGGCCACCGCCG CGGCATCGCCGCCATGCCGCACTCACTCTCCCTCCTGCTCGCGCCCAGCCGCGCGCTCTC CCTCTCCTCCCCACCGCTCCGCCTCGCCCCAACGCACCCACCACTTCGCCTGCACCACGA CGGCGGCCACCTCCTCGTGGGCACGACGAGGCGGCAGGCTCCCTCGCCTCGCCGCCGCCG TCTCCATGCCGCCAGGGCTTCCGCGCCGTCCGCCGCCGCGGCGTCCCCCGTAGGGCCTGC GGGCGAGGGTGGCGAGGTGGGGGGCAGGGCGAGGAAGGCGGCGGGGTACCGGAACAGGTT CCTGGACCTGGCGCGGCTGGGGGCCGTGGCGGAGAGCGCGGCGGAGGCGCTCTTCCGCAG CGAGATTCGCCGGCGGCTGGCCGTCACGGCCGTGCTCATCCTGCTCAGCCGCGTCGGCTA CTTCGTCCCGCTTCCCGGGTTCGACCGACGGCTCATCCCCGATTCCTACCTCAGCTTTGC ACCCCTTCCTGCAGATGACCTCGGTGATTTTTCATCCGAATTGAAGCTGTCATTTTTCCA GCTCGGAATCAGTCATCAGATTTCAGCATCTATTGTCATGCAGGTTCTCTGTCATGTTCT TCCATCACTTGAAAAACTACGAAAGGAAGGGTTAGATGGACATGAGAAGATCAAAGGCTA TATTTGGTGGCTGTCGCTGGGTTTTGCACTTGTGGCGGCTTTTACAGTGTCATGCTACTC ACTGCAATATTCTATATATGCTGCAAGTTACAGAGTTAAGCATGTAATGATAACAAGCCT TTTCCTTGTTCTTGGTGCAATGACAATGACATGGATCTGTGACACTATATCGGAATCTGG ATTTGGACATGGCTCTTCCTTGATTATCTGTGTGGGAATATTGACTGGTTATACAGACAC ACTCCACAAGATGTTAACTCAATTTTCAGGAAATTGGTACAGCTGTTGGCCCTACATCTT GGGGATAGCTGGGACTTTTATTTTGGTTACCATGGGAGCAGTACTGGTGACTGAAGGGTG TAGGAAGATAAAGCTTCAGTACTATGGATTTAAATTGGCTTCTGGTGCAAGGAGTGAGAG CTCCCCAGTTACAGAGGTAGAGCCATATATCCCTTTTAACATAAATCCAACTGGGATGCA GCCTTTGCTTACCACCTCATACTTATTAGCTTTTCCAAGCATTATGGCCAGCATTTTTGG TACGCAATTTTGGGAAAGTTTGAAGGAAACGTTGAATCCAAAGACTTCAGTTGGTGGTGG TCCATGGGTTTATTATTTGACATATGCATTTCTTGTCTTCGTCTTCAATATTTTTGACAT TGCAAACTTGCCAAAAGAGATATCTGACTACCTGAATAAAATGAGTGCTAGAGTACCGAA GATAAAGCCTGGAAGAGCAACAGTAGAGTATCTTACAAAAATACAAACATCTACACGTTT CTGGGGGGGTATATTGCTGAGCTTGTTGGCGACTTCCTCTTTATTACTTGACCGATATCT CAGGCAGATAAATGAGGGATTTTCTATAGGTTTCACGTCGGTGTTGATTATTGTGGGCTC AATCATCGAGCTGAGAAGGTCTTATCAAGCATACAATGTGATGCCAGCACTAAGCAAAGT TCTAAGGAGATATGGTGCCTGAGGTTATGTACGCCACATATTTGGTTATGATGGTATCAT CCACAAGAAGAAGAGGGCCATTTCAAAAAAACTTCAGAGTTTACAGGCTTACAGCCGACT AGATGCTGTGACCTTGATTATTGTCAACAACTTGCAGTACGGTGCAGTAAGAAGAGTTCT ATAACCCAGACCAATATTGTGCTTGGGTTGGGATGAGATTAGTATAGTTTGATATCAATC TTCTGTGGCATAAACTGGAACTGAAGAACCAAGGAGGATATTTTGTTACTCATGGCACAG CAACTATGAAGAGCGTGACCTACGAGGAGCTGTGTAATTGTGTTGTCTTTGGCCACTTCT GGAATGGTTGACGGCTTGATGCAATGCGAACGAAAATTTGGATCCAATCTCACCCAGCTG TATAATTTTCTGAAGATCAGATTGCCAAATTGCTGGCTAGCTGCATCACGCTTAGTAAAT GGTGCGGTCAGAAGTCAGAACCTGAAGTCTGCAAAATTGCTGGTTTTGGGTTGATTGTTG GAACGTTCTACATCAGAGGCTGGCGGGTTGACCATCTGGACTTATCCGTGTAGCACAATG AAGATCAGCTGTCGTGCGTTTGCTGACCAGTAGTATCTCTCTGTAGGCTTATGTTTTTGT AAATATATGGCTTATTAACAGTAGAACTTCCACTCCTGTCCTGACTTCTCAAAGGCTGTT CTGTTCACTTTTCCAAAAAGCAGCTTCATATTTACAAAAGATAAAGAAGC