Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0393900-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:19166560:19168329:-1 gene:Os05g0393900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os05t0393900-00)
Sequence	ATGCGCTCCCCCTCCCGTCCCCTCCCTCGCCTCCTCCTCCTCCGCCGCCGCTGCCTCTCC TCCGCCCCACACCGAGACCGCCGCTTCCTCCCCCTCCTCCGCTTCGCCGCCCTCGCCAAG GAGCTCTCCGACCACCGTCCCCGGCCGGGAACGCCGCCGCCCCCTACACGGCCGCGGTCC CCGCACCCCTACGACTACAACCGCCTCATGTCCGCGCACGCGGGGACGCGGGACGGCGCC GGCGCGGACCGCGCCCTCCACCTGCTCGACGAAATGCGCGCCCTCCTCCGGCGCCGCCCC GACGCCGCCTGCTTCACAACGGTCGCCGCGGCGCTGTCGTCCGCGTCCCGCCCGGGCGCG GCGCTCGCCGTGCTCGACGCCATGGCCGCGGATGGCGTCGCGCCCGACGCCGCGGCGTGC ACGGTGCTCGTCGGGGTGTACGCCTGCCGCCTGCGGCGGTTCGACGCCGCCTACGAGGTC GTGCGCTGGATGGTGGCGAATGGCGTGGCCCCTGACGTGGTCACCTACTCGACGTTGATA TCTGGGCTGTGCAGCGCTGGGCAGGTGGCTGAAGCTCTCGGCGTGCTGGACTTGATGCTG GAGGAAGGTTGCCAACCCAATGCGCACACATATACACCTATCGTGCACGCATATTGCACG GGTGGGAGGATACATGAGGCGAAGAGGCTGTTGAACACTATGATTGCCAGTGGATTTGCT CCAAGTACAGCCACTTACAATGTCTTGGTTGAAGCTCTCTGCAAGGTTGGGGCTTTCGAG GAGGTAGATGCCCTTCTTGAGGAGAGCACTGCAAAAGGGTGGACACCAGATGTAATCACA TATAGCAGTTACATGGATGGGCTATGCAAAGCCGGCAGAATAGATAAGAGCTTTGCATTG GTTGATAAGATGTTATCCAACGGGTTACAACCTAGTGAGGTGACTCTGAATATCCTTCTT GATGGTGTTTGTCGTAGCTCAACTGCATGGGCTGCAAAACGCCTCTTGGAGTGCAGCGCA GAGCTTGGGTGGGATGCCAATGTTGTCAATTATAACACGGTGATGAGGAAGCTTTGCGAT GAGCACAGATGGCTGTCTGTTGTCAAACTTTTCACTGACATGGCCAAGAAAGGCATTGCT CCAAATAGCTGGACCTTCAACATTGTTGTCCACAGCCTCTGTAAATTGGGGAGACTTCAT AAAGCGCTTTTTCTGCTGAGAAGCAAAGAGTTTGTAGCTACCGTTATCACATACAATACT TTAATCCGTCATCTCAGTATTTCTGGGGAAGGCAATGAAGTTTGCCTCTTACTTTATCAG ATGATTGAGGGAGGCATTGCTCCCAATGACATCACCTACAGTCTTGTGATTGATTGTCTC TGTAGAGAAGAGAAGTTCTTGGTGGCTCTTTGCTGTTTTTACCAATCACTTGAGGACGAC TTCTTCCCATCTGCATTTCTCAGTATTATACGAGGTCTAATTGTTGGTGGTATGCTTGGT CAATTGCATACTCTAATTGGATGTGTTCTTGGACAAGGCTTTATAATAGAAGTGTATATT TACCAGGAACTGATCAAGGCTCTTTGTAAGAATGGATACTGTCAAAGCGTAGAAATGTAC AAAGTTTGCCATATATTGGAAAGAATGCTCAGATTGAGATGA

Peptide Sequence

PEP ID	Os05t0393900-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:19166560:19168329:-1 gene:Os05g0393900 transcript:Os05t0393900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os05t0393900-00)
Sequence	MRSPSRPLPRLLLLRRRCLSSAPHRDRRFLPLLRFAALAKELSDHRPRPGTPPPPTRPRS PHPYDYNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGA ALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLI SGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFA PSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFAL VDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKLCD EHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALFLLRSKEFVATVITYNT LIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFLVALCCFYQSLEDD FFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQELIKALCKNGYCQSVEMY KVCHILERMLRLR

Transcript Sequence

Transcript ID	Os05t0393900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19166560:19168329:-1 gene:Os05g0393900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os05t0393900-00)
Sequence	GAACGTCGCGCGCTCCGCCGTGGGCTGCAAGGCTGCACCCGCGGCCGCCGCTCTCCGATG TCGCCGCCGCCGCCGCCTCCTCCCGCACCACCCCATGCGCTCCCCCTCCCGTCCCCTCCC TCGCCTCCTCCTCCTCCGCCGCCGCTGCCTCTCCTCCGCCCCACACCGAGACCGCCGCTT CCTCCCCCTCCTCCGCTTCGCCGCCCTCGCCAAGGAGCTCTCCGACCACCGTCCCCGGCC GGGAACGCCGCCGCCCCCTACACGGCCGCGGTCCCCGCACCCCTACGACTACAACCGCCT CATGTCCGCGCACGCGGGGACGCGGGACGGCGCCGGCGCGGACCGCGCCCTCCACCTGCT CGACGAAATGCGCGCCCTCCTCCGGCGCCGCCCCGACGCCGCCTGCTTCACAACGGTCGC CGCGGCGCTGTCGTCCGCGTCCCGCCCGGGCGCGGCGCTCGCCGTGCTCGACGCCATGGC CGCGGATGGCGTCGCGCCCGACGCCGCGGCGTGCACGGTGCTCGTCGGGGTGTACGCCTG CCGCCTGCGGCGGTTCGACGCCGCCTACGAGGTCGTGCGCTGGATGGTGGCGAATGGCGT GGCCCCTGACGTGGTCACCTACTCGACGTTGATATCTGGGCTGTGCAGCGCTGGGCAGGT GGCTGAAGCTCTCGGCGTGCTGGACTTGATGCTGGAGGAAGGTTGCCAACCCAATGCGCA CACATATACACCTATCGTGCACGCATATTGCACGGGTGGGAGGATACATGAGGCGAAGAG GCTGTTGAACACTATGATTGCCAGTGGATTTGCTCCAAGTACAGCCACTTACAATGTCTT GGTTGAAGCTCTCTGCAAGGTTGGGGCTTTCGAGGAGGTAGATGCCCTTCTTGAGGAGAG CACTGCAAAAGGGTGGACACCAGATGTAATCACATATAGCAGTTACATGGATGGGCTATG CAAAGCCGGCAGAATAGATAAGAGCTTTGCATTGGTTGATAAGATGTTATCCAACGGGTT ACAACCTAGTGAGGTGACTCTGAATATCCTTCTTGATGGTGTTTGTCGTAGCTCAACTGC ATGGGCTGCAAAACGCCTCTTGGAGTGCAGCGCAGAGCTTGGGTGGGATGCCAATGTTGT CAATTATAACACGGTGATGAGGAAGCTTTGCGATGAGCACAGATGGCTGTCTGTTGTCAA ACTTTTCACTGACATGGCCAAGAAAGGCATTGCTCCAAATAGCTGGACCTTCAACATTGT TGTCCACAGCCTCTGTAAATTGGGGAGACTTCATAAAGCGCTTTTTCTGCTGAGAAGCAA AGAGTTTGTAGCTACCGTTATCACATACAATACTTTAATCCGTCATCTCAGTATTTCTGG GGAAGGCAATGAAGTTTGCCTCTTACTTTATCAGATGATTGAGGGAGGCATTGCTCCCAA TGACATCACCTACAGTCTTGTGATTGATTGTCTCTGTAGAGAAGAGAAGTTCTTGGTGGC TCTTTGCTGTTTTTACCAATCACTTGAGGACGACTTCTTCCCATCTGCATTTCTCAGTAT TATACGAGGTCTAATTGTTGGTGGTATGCTTGGTCAATTGCATACTCTAATTGGATGTGT TCTTGGACAAGGCTTTATAATAGAAGTGTATATTTACCAGGAACTGATCAAGGCTCTTTG TAAGAATGGATACTGTCAAAGCGTAGAAATGTACAAAGTTTGCCATATATTGGAAAGAAT GCTCAGATTGAGATGATCTTTTGTTCCACC