Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0393800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19160140:19166101:1 gene:Os05g0393800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.3 description:Protein of unknown function DUF221 domain containing protein. (Os05t0393800-01)
Sequence	ATGGGTTCTCTCACAGATATCGGCGTCGCCGCAGGAATAAACATACTGTCCGCATTGGGT TTTCTTCTCGCATTTGCGGTTCTCAGGATACAGCCTATCAACGACAGGGTCTACTTTCCC AAATGGTACCTCAAAGGGACAAGAAGCAGCCCAAGAAGCATGGGAACGGTTTTCTCAAAG TTTGTCAATGCTGATCTCTCGACGTATATCCGCTTCCTGAATTGGATGCCTGCAGCGCTG CAAATGCCTGAGCCCGAGTTGATTGAGCACGCAGGCCTCGACTCCGCGGTATATGTCCGC ATATATCTTCTTGGGTTAAAAATATTTGTGCCGATTGCTGTGCTGGCATTCATTGTCCTT GTTCCTATCAACTGGGCTAGTGGAACTTTGGAGAAGGAAAAGAGTCTAAGTTATGATCAA ATTGACAAGCTTTCAATATCTAACCTTGGAAAAGGATCGAAAAGATTTTGGGCACACATA GTGATGGCCTATGTATTTACGTTTTGGACGTTTTTCGTGTTGTATCGTGAATACAAGGTT GTAACAACTATGAGATTGCGCTTTCTTGCTATTCAGAATCGTCGAGCTGATCAGTTTACG GTCCTGGTGAGAAATGTACCACCTGACCCAGATGAAACAGTTAGTGAGCATGTTGAGCAC TTCTTTGCTGTCAATCATCGTGATCATTATCTCAGTCACCAGACCGTATACAATGCAAAC ACCCTTGCCGGTTTGGTTGAGCAGAAGAAAGGCTTGCAAAACTGGCTGGTCTACTACGAA AACCAGCATGCTAAAAACCCTGCAAAAAAACCAACTATGAAGACAGGATTGTGGGGCCTT TGGGGGAAAAGAGTGGATGCTATAGAACACTACACCACTGCCATTGAGGAGTTATGCAAA CAGGAAGATGAGGAGAGACACAAGGTGATCACTGATCCTAATGCTATTATGCCAGCTGCA TTTGTATCTTTCAAAAGCCGGTGGGGAGCTGCTGTTTGCGCTCAAACGCAACAGACGAGC AATCCAACGTTGTGGCTTACCGAGTGGGCCCCAGAACCTCGGGATGTTTTCTGGCCTAAT CTCGCGATCCCTTTCGTCGAGCTCTCAGTCCGGAGGCTTATCATGGCCGTTGCACTCTTC TTTCTGACCTTTTTCTTCATGATTCCAATTGCAATTGTCCAATCAATGGCAAACTTGGAT GACATTGAACGGATGCTTCCTTTCCTGAAACCTATAATAGAAAGAAATTCACTGAAGTCA ATTGTGCAAGGTTTCTTGCCAGGAATCGCATTGAAAATCTTCCTTATACTTCTCCCAACA TTTCTTGTGATGATGAGCAAAATTGAAGGTCATACATCACTATCTGGATTGGACAGGAGG ACTGCGTCGAAGTATTATTTGTTCCTATTTGTCAATGTGTTCTTGGGGAGTGTAATAACT GGAACAGCGTTCCAACAACTCAACAATTTTATCCATCAGTCAGCTAATAAAATTCCAGAG ATTGTCGGAGAATCCATCCCCATGAAAGCAACATTTTTCATCACATATGTAATGGTTGAT GGCTGGGCTGGTGTTGCCGCTGAGGTTCTTAGGTTGAAGCCATTGGTCATGTTCCATATA AAGAATACTTTCTTGGTCAGAACCGAGCGAGATCGAGAGCAGGCCATGGACCCTGGGAGC CTGGATTTTGGCACCACAGAACCAAGGATACAACTGTACTTTCTGCTTGGGCTTGTATAT GCTGTCGTGACACCAATTCTTCTACCTTTCATCATAGTGTTCTTTAGCCTTGCCTATCTA GTATTCAGACACCAGATCATTAATGTCTACAATCAGCAATATGAGAGTGGCGCGCAATTC TGGCCAGATGTCCAAAGACGACTGGTTATAGCATTGATAGTATCACAAATCCTCCTGTTG GGACTGCTGAGCACGCAGGAAGCAGAGAAATCCACTGTTGCTCTTCTTCCTCTTCCTGTA CTGTCCATATGGTTCCACTATGTTTGCAAGGGCCGCTTTGAGCCAGCGTTTATAAAGTTC CCCCTGCAGGATGCAATGGTAAAGGATACACTGGAACGGGCAAATGACCCAACCCTGAAT TTGAGAGAGTACCTGAAGGATGCATATGTGCACCCAGTGTTCCAAAAAAATGACATATAT GAGTTTGCTGGCATCGACGAGGAAGAGAAGAACCCCATGGTTGCAACGAAGCGCCAATCG CGAATGAACACACCAGTAGATAGCAAGTTCAATTCCAGTTCTGGCACTAATGAAGGAGAG TTCAGTCGGATGGCTCCTACCTGA

Peptide Sequence

PEP ID	Os05t0393800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19160140:19166101:1 gene:Os05g0393800 transcript:Os05t0393800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.3 description:Protein of unknown function DUF221 domain containing protein. (Os05t0393800-01)
Sequence	MGSLTDIGVAAGINILSALGFLLAFAVLRIQPINDRVYFPKWYLKGTRSSPRSMGTVFSK FVNADLSTYIRFLNWMPAALQMPEPELIEHAGLDSAVYVRIYLLGLKIFVPIAVLAFIVL VPINWASGTLEKEKSLSYDQIDKLSISNLGKGSKRFWAHIVMAYVFTFWTFFVLYREYKV VTTMRLRFLAIQNRRADQFTVLVRNVPPDPDETVSEHVEHFFAVNHRDHYLSHQTVYNAN TLAGLVEQKKGLQNWLVYYENQHAKNPAKKPTMKTGLWGLWGKRVDAIEHYTTAIEELCK QEDEERHKVITDPNAIMPAAFVSFKSRWGAAVCAQTQQTSNPTLWLTEWAPEPRDVFWPN LAIPFVELSVRRLIMAVALFFLTFFFMIPIAIVQSMANLDDIERMLPFLKPIIERNSLKS IVQGFLPGIALKIFLILLPTFLVMMSKIEGHTSLSGLDRRTASKYYLFLFVNVFLGSVIT GTAFQQLNNFIHQSANKIPEIVGESIPMKATFFITYVMVDGWAGVAAEVLRLKPLVMFHI KNTFLVRTERDREQAMDPGSLDFGTTEPRIQLYFLLGLVYAVVTPILLPFIIVFFSLAYL VFRHQIINVYNQQYESGAQFWPDVQRRLVIALIVSQILLLGLLSTQEAEKSTVALLPLPV LSIWFHYVCKGRFEPAFIKFPLQDAMVKDTLERANDPTLNLREYLKDAYVHPVFQKNDIY EFAGIDEEEKNPMVATKRQSRMNTPVDSKFNSSSGTNEGEFSRMAPT

Transcript Sequence

Transcript ID	Os05t0393800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19160140:19166101:1 gene:Os05g0393800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.3 description:Protein of unknown function DUF221 domain containing protein. (Os05t0393800-01)
Sequence	ACCGGGCTGGTCGATCTGCCTCGTTGGCGGCCGGCCGCCGGCCGATCGTGATCTGACAGG ACAGCCATTTGCACGCGTCTCTCCCTCGTTTTACTACCATCCACAGGAGGCCCGAAGTCA CCCGCGTCTCGGCCCTCTCCGTCCTCGTTGCTTCCGACGCCGGAGGCCGAGAGACAGGCG ACGCGCACGTCTGTCTGCGCCGTTGCCGCAGATCAGCCTGACGAGATACCAGCTCTACCA ACAACTCCCGTTACTTCTCTGTATGATGCCTGTTCTGAACTGAGTCTTCATAGATAGAGA GAAATGGGTTCTCTCACAGATATCGGCGTCGCCGCAGGAATAAACATACTGTCCGCATTG GGTTTTCTTCTCGCATTTGCGGTTCTCAGGATACAGCCTATCAACGACAGGGTCTACTTT CCCAAATGGTACCTCAAAGGGACAAGAAGCAGCCCAAGAAGCATGGGAACGGTTTTCTCA AAGTTTGTCAATGCTGATCTCTCGACGTATATCCGCTTCCTGAATTGGATGCCTGCAGCG CTGCAAATGCCTGAGCCCGAGTTGATTGAGCACGCAGGCCTCGACTCCGCGGTATATGTC CGCATATATCTTCTTGGGTTAAAAATATTTGTGCCGATTGCTGTGCTGGCATTCATTGTC CTTGTTCCTATCAACTGGGCTAGTGGAACTTTGGAGAAGGAAAAGAGTCTAAGTTATGAT CAAATTGACAAGCTTTCAATATCTAACCTTGGAAAAGGATCGAAAAGATTTTGGGCACAC ATAGTGATGGCCTATGTATTTACGTTTTGGACGTTTTTCGTGTTGTATCGTGAATACAAG GTTGTAACAACTATGAGATTGCGCTTTCTTGCTATTCAGAATCGTCGAGCTGATCAGTTT ACGGTCCTGGTGAGAAATGTACCACCTGACCCAGATGAAACAGTTAGTGAGCATGTTGAG CACTTCTTTGCTGTCAATCATCGTGATCATTATCTCAGTCACCAGACCGTATACAATGCA AACACCCTTGCCGGTTTGGTTGAGCAGAAGAAAGGCTTGCAAAACTGGCTGGTCTACTAC GAAAACCAGCATGCTAAAAACCCTGCAAAAAAACCAACTATGAAGACAGGATTGTGGGGC CTTTGGGGGAAAAGAGTGGATGCTATAGAACACTACACCACTGCCATTGAGGAGTTATGC AAACAGGAAGATGAGGAGAGACACAAGGTGATCACTGATCCTAATGCTATTATGCCAGCT GCATTTGTATCTTTCAAAAGCCGGTGGGGAGCTGCTGTTTGCGCTCAAACGCAACAGACG AGCAATCCAACGTTGTGGCTTACCGAGTGGGCCCCAGAACCTCGGGATGTTTTCTGGCCT AATCTCGCGATCCCTTTCGTCGAGCTCTCAGTCCGGAGGCTTATCATGGCCGTTGCACTC TTCTTTCTGACCTTTTTCTTCATGATTCCAATTGCAATTGTCCAATCAATGGCAAACTTG GATGACATTGAACGGATGCTTCCTTTCCTGAAACCTATAATAGAAAGAAATTCACTGAAG TCAATTGTGCAAGGTTTCTTGCCAGGAATCGCATTGAAAATCTTCCTTATACTTCTCCCA ACATTTCTTGTGATGATGAGCAAAATTGAAGGTCATACATCACTATCTGGATTGGACAGG AGGACTGCGTCGAAGTATTATTTGTTCCTATTTGTCAATGTGTTCTTGGGGAGTGTAATA ACTGGAACAGCGTTCCAACAACTCAACAATTTTATCCATCAGTCAGCTAATAAAATTCCA GAGATTGTCGGAGAATCCATCCCCATGAAAGCAACATTTTTCATCACATATGTAATGGTT GATGGCTGGGCTGGTGTTGCCGCTGAGGTTCTTAGGTTGAAGCCATTGGTCATGTTCCAT ATAAAGAATACTTTCTTGGTCAGAACCGAGCGAGATCGAGAGCAGGCCATGGACCCTGGG AGCCTGGATTTTGGCACCACAGAACCAAGGATACAACTGTACTTTCTGCTTGGGCTTGTA TATGCTGTCGTGACACCAATTCTTCTACCTTTCATCATAGTGTTCTTTAGCCTTGCCTAT CTAGTATTCAGACACCAGATCATTAATGTCTACAATCAGCAATATGAGAGTGGCGCGCAA TTCTGGCCAGATGTCCAAAGACGACTGGTTATAGCATTGATAGTATCACAAATCCTCCTG TTGGGACTGCTGAGCACGCAGGAAGCAGAGAAATCCACTGTTGCTCTTCTTCCTCTTCCT GTACTGTCCATATGGTTCCACTATGTTTGCAAGGGCCGCTTTGAGCCAGCGTTTATAAAG TTCCCCCTGCAGGATGCAATGGTAAAGGATACACTGGAACGGGCAAATGACCCAACCCTG AATTTGAGAGAGTACCTGAAGGATGCATATGTGCACCCAGTGTTCCAAAAAAATGACATA TATGAGTTTGCTGGCATCGACGAGGAAGAGAAGAACCCCATGGTTGCAACGAAGCGCCAA TCGCGAATGAACACACCAGTAGATAGCAAGTTCAATTCCAGTTCTGGCACTAATGAAGGA GAGTTCAGTCGGATGGCTCCTACCTGAAGCTTGATTTTTCATCAGTCAATGTAAACATTT TGCAGTTTGGTAATATTGTAAATGTTCAGGCAAAAAGGAAATACAAGGTTTAAACAATGT TGG