Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0393700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19155053:19157429:-1 gene:Os05g0393700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISOAMYLASE 2 description:Similar to Isoamylase-type starch debranching enzyme ISO2. (Os05t0393700-01)
Sequence	GATGGGGACGGCGGCGGCGGGGGGTACGCGGTGTCCGTCGAGGTCCCTGGCACTCGCGGG CGGGAGGGCGGGCTAGTGCTCCGCGCCTCGGGGTCCGGCGAGGGCGTCCCGCTGGCGCCG GCCGCCGGCGGCGCCTCCCTCGCGGCCGAGCTCTCCTTCGACCCGACCCGCGCGCCGTTC TACCTCTCGTTCCTGCTCACGGACGCGTCGGGGGCGGAGATACGGACGCACCGCAAGACG AGCTTCCGCGTGCCCGTCGGCGTCGGGCCGGGCAGCCCCGCGCCGCTCGGCATGTCTATC TCAGGCGACGGCGCCGTCAATTTCGCGGTGTACAGCAAGAATGCCAATGCCGTTTCTCTC TACCTCTACGCCGCCGCCGTCGGCGGCGGCGGCGGCGACGAGCCCGCGCTGGAGATCGAC CTCGATCCGTACATCCACCGGACTGGCAACGTCTGGCATGTCTCTCTGGCGAGCGTAGAT GGGTACGTCAGCTATGCCTTCTGCTGCGGTGGCATCCGCCGCCCACTGTTGGACCCGTAC GCCAAGGTGATCGGAGACTTCGTCTCCAGCAACTCGGTTTACGACGAGGGTGTCACTGCG CCGTCAATGAGGTGCTTTGCATCGTTGGCGATTGCGCCGAGCTACAACTGGGGAAGGGAC AGGCACCCCCGTCTGCCATTGGAGAAGCTGGTGGTGTACCGGGCAAATGTGGCTTTGTTC ACAAAGGACAGGTCGAGCGGGCTCCCGGATGACGCTGCCGGCACTTTCACCGGGCTTTCT GCTAAGGTAGAGCACTTCAGGAGCCTTGGTGTCAATGCAATTTTGCTGGAACCAGTGTTC CCATTTCATCAGGTGAAAGGACCTTATTTCCCGTACCATTTCTTTTCACCGATGAACTTG TATAGCAGCAAAGGTTTGAGTGTTTCAGCCATCAAGTCCATGAAGGATATGGTCAGGGTA ATGCATAGAAATGGAATAGAGGTCCTCTTGGAGGTGGTTTTTACACATACTGCTGAGGGA GAATCAGAGTGTCAGACGATATCAATGCGTGGCATTGATAATTCCTCGTATTACATTGCC AATGGGATCGCAGGATGCAAAGCGAGCATACTGAATTGCAACCATCCGGTGACTCAGAAG CTGATTTTGGACAGCCTCCGCCATTGGGTGCTTGACTTCCATGTTGATGGGTTTTGCTTC ATCAATGCCCCTTTCCTTGTGAGAGGTCCTGGTGGTGAATATTTATCTCGACCTCCCCTT CTTGAGGCGATAACTTTTGACCCGGTTCTTTCCATGACAAAGATCATTGCAGATCCTTGG TCTCCACTTGACATATCTAACGTGCAATTCCCATTCCCTCATTGGAAAAGATGGGCTGAG GTGAACACAAGATTCTCTATTGATGTGCGCAAATTTTTGAAGAGAGAAGCACTTATTAGT GATCTTGCTACACGCCTGTGCGGCAGTGGGGACCTGTTCTCAACCAGAGGGCCTGCATTT TCATTCAATCATGTATCCAGGAATTCAGGGCTTTCTCTTGTTGATCTGGTGAGTTTCAGC AATGATGATCTTCTTTCTGAGTCGAGCTGGAATTGTGGTGAAGAAGGTCCATCAGAGAAC AGTGCTGTCCTTCAGACAAGGCTAAGGCAGATACGCAACTTCTTATTTATTCTATTTGTA TCACTTGGTGTTCCTGTTCTGAACATGGGAGATGAATGTGGGCACTCTGCTGCTGGTTCA GTATCATACAAGGATAGAGGGCCTCTGAACTGGAGAGGCATGAAGACAACATTTGTTAAG GAAGTGACCGGATTCATTTCATTTCTAACTGCACTCAGGAGTCGGCGAGGCGATATCTTT CAGAGAAGGGAATTCCTAAAACTTGAGAATATACATTGGTATGGGAGCGATCTATGTGAG CCAGGTTGGGATGATCCTACCAGCAACTTTCTTTGCATGCACATAAATGCAGAGGTAGAT GAAATGGCGGCAGATTCGGTCAGAGGCGACCTGTACATCTGTTTCAATGCAAACGAGGAA TCAGTGAGTGCTGCCTTGCCTGCTCTTGCAGAAGGATCCGTGTGGTTGCGCTTGGTTGAC ACATCACTTGCATTTCCAGGTTTCTTTGCAACCGAATCTAATCCCAAGGTGCAACAAGTG CCAGGATTATCCTCTTATCATGTGGAAGCGCATACTTGTGTTCTATTTGAATCAAAGAGC GCTCTTGCCTAG

Peptide Sequence

PEP ID	Os05t0393700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19155053:19157429:-1 gene:Os05g0393700 transcript:Os05t0393700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISOAMYLASE 2 description:Similar to Isoamylase-type starch debranching enzyme ISO2. (Os05t0393700-01)
Sequence	DGDGGGGGYAVSVEVPGTRGREGGLVLRASGSGEGVPLAPAAGGASLAAELSFDPTRAPF YLSFLLTDASGAEIRTHRKTSFRVPVGVGPGSPAPLGMSISGDGAVNFAVYSKNANAVSL YLYAAAVGGGGGDEPALEIDLDPYIHRTGNVWHVSLASVDGYVSYAFCCGGIRRPLLDPY AKVIGDFVSSNSVYDEGVTAPSMRCFASLAIAPSYNWGRDRHPRLPLEKLVVYRANVALF TKDRSSGLPDDAAGTFTGLSAKVEHFRSLGVNAILLEPVFPFHQVKGPYFPYHFFSPMNL YSSKGLSVSAIKSMKDMVRVMHRNGIEVLLEVVFTHTAEGESECQTISMRGIDNSSYYIA NGIAGCKASILNCNHPVTQKLILDSLRHWVLDFHVDGFCFINAPFLVRGPGGEYLSRPPL LEAITFDPVLSMTKIIADPWSPLDISNVQFPFPHWKRWAEVNTRFSIDVRKFLKREALIS DLATRLCGSGDLFSTRGPAFSFNHVSRNSGLSLVDLVSFSNDDLLSESSWNCGEEGPSEN SAVLQTRLRQIRNFLFILFVSLGVPVLNMGDECGHSAAGSVSYKDRGPLNWRGMKTTFVK EVTGFISFLTALRSRRGDIFQRREFLKLENIHWYGSDLCEPGWDDPTSNFLCMHINAEVD EMAADSVRGDLYICFNANEESVSAALPALAEGSVWLRLVDTSLAFPGFFATESNPKVQQV PGLSSYHVEAHTCVLFESKSALA

Transcript Sequence

Transcript ID	Os05t0393700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19155053:19157429:-1 gene:Os05g0393700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISOAMYLASE 2 description:Similar to Isoamylase-type starch debranching enzyme ISO2. (Os05t0393700-01)
Sequence	GATGGGGACGGCGGCGGCGGGGGGTACGCGGTGTCCGTCGAGGTCCCTGGCACTCGCGGG CGGGAGGGCGGGCTAGTGCTCCGCGCCTCGGGGTCCGGCGAGGGCGTCCCGCTGGCGCCG GCCGCCGGCGGCGCCTCCCTCGCGGCCGAGCTCTCCTTCGACCCGACCCGCGCGCCGTTC TACCTCTCGTTCCTGCTCACGGACGCGTCGGGGGCGGAGATACGGACGCACCGCAAGACG AGCTTCCGCGTGCCCGTCGGCGTCGGGCCGGGCAGCCCCGCGCCGCTCGGCATGTCTATC TCAGGCGACGGCGCCGTCAATTTCGCGGTGTACAGCAAGAATGCCAATGCCGTTTCTCTC TACCTCTACGCCGCCGCCGTCGGCGGCGGCGGCGGCGACGAGCCCGCGCTGGAGATCGAC CTCGATCCGTACATCCACCGGACTGGCAACGTCTGGCATGTCTCTCTGGCGAGCGTAGAT GGGTACGTCAGCTATGCCTTCTGCTGCGGTGGCATCCGCCGCCCACTGTTGGACCCGTAC GCCAAGGTGATCGGAGACTTCGTCTCCAGCAACTCGGTTTACGACGAGGGTGTCACTGCG CCGTCAATGAGGTGCTTTGCATCGTTGGCGATTGCGCCGAGCTACAACTGGGGAAGGGAC AGGCACCCCCGTCTGCCATTGGAGAAGCTGGTGGTGTACCGGGCAAATGTGGCTTTGTTC ACAAAGGACAGGTCGAGCGGGCTCCCGGATGACGCTGCCGGCACTTTCACCGGGCTTTCT GCTAAGGTAGAGCACTTCAGGAGCCTTGGTGTCAATGCAATTTTGCTGGAACCAGTGTTC CCATTTCATCAGGTGAAAGGACCTTATTTCCCGTACCATTTCTTTTCACCGATGAACTTG TATAGCAGCAAAGGTTTGAGTGTTTCAGCCATCAAGTCCATGAAGGATATGGTCAGGGTA ATGCATAGAAATGGAATAGAGGTCCTCTTGGAGGTGGTTTTTACACATACTGCTGAGGGA GAATCAGAGTGTCAGACGATATCAATGCGTGGCATTGATAATTCCTCGTATTACATTGCC AATGGGATCGCAGGATGCAAAGCGAGCATACTGAATTGCAACCATCCGGTGACTCAGAAG CTGATTTTGGACAGCCTCCGCCATTGGGTGCTTGACTTCCATGTTGATGGGTTTTGCTTC ATCAATGCCCCTTTCCTTGTGAGAGGTCCTGGTGGTGAATATTTATCTCGACCTCCCCTT CTTGAGGCGATAACTTTTGACCCGGTTCTTTCCATGACAAAGATCATTGCAGATCCTTGG TCTCCACTTGACATATCTAACGTGCAATTCCCATTCCCTCATTGGAAAAGATGGGCTGAG GTGAACACAAGATTCTCTATTGATGTGCGCAAATTTTTGAAGAGAGAAGCACTTATTAGT GATCTTGCTACACGCCTGTGCGGCAGTGGGGACCTGTTCTCAACCAGAGGGCCTGCATTT TCATTCAATCATGTATCCAGGAATTCAGGGCTTTCTCTTGTTGATCTGGTGAGTTTCAGC AATGATGATCTTCTTTCTGAGTCGAGCTGGAATTGTGGTGAAGAAGGTCCATCAGAGAAC AGTGCTGTCCTTCAGACAAGGCTAAGGCAGATACGCAACTTCTTATTTATTCTATTTGTA TCACTTGGTGTTCCTGTTCTGAACATGGGAGATGAATGTGGGCACTCTGCTGCTGGTTCA GTATCATACAAGGATAGAGGGCCTCTGAACTGGAGAGGCATGAAGACAACATTTGTTAAG GAAGTGACCGGATTCATTTCATTTCTAACTGCACTCAGGAGTCGGCGAGGCGATATCTTT CAGAGAAGGGAATTCCTAAAACTTGAGAATATACATTGGTATGGGAGCGATCTATGTGAG CCAGGTTGGGATGATCCTACCAGCAACTTTCTTTGCATGCACATAAATGCAGAGGTAGAT GAAATGGCGGCAGATTCGGTCAGAGGCGACCTGTACATCTGTTTCAATGCAAACGAGGAA TCAGTGAGTGCTGCCTTGCCTGCTCTTGCAGAAGGATCCGTGTGGTTGCGCTTGGTTGAC ACATCACTTGCATTTCCAGGTTTCTTTGCAACCGAATCTAATCCCAAGGTGCAACAAGTG CCAGGATTATCCTCTTATCATGTGGAAGCGCATACTTGTGTTCTATTTGAATCAAAGAGC GCTCTTGCCTAGTTTCTGCAGTCAAAATAAGGATCACAAACCTATGATAAGTACAAATTT TTGTGTATATCTACAGTCAGAAACCTGAGGTCCCAATAAGTTGTAGTGGTTGTATATGAG AATGTTAATGATAATAAAAGAATGTATCATTTTCCAG