Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0391500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:19010877:19019470:1 gene:Os05g0391500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Endo-beta-mannosidase. (Os05t0391500-01)
Sequence	ATGGCTGCTGCTGCTGCGGCTGCGGCGGCGGCGGCGGCCGAAGTGGGGAAGCGGGTGCTC GACACGGGCTGGCTCGCCGCGCGCTCCACCGAGGTGGCCCTCACCGGCGAGCAGCTCACC ACCACCGACCCGCCGCCCGCCGACCCGGAGCCGACGGCACCCTGGATGCACGCCGCCGTC CCCGGCACCGTGCTGGGGACGCTGCTGAAGAACAAGCTGATCCCCGACCCCTTCTACGGC CTCAACAACGAGTCGATCATCGACATCGCCAAATCCGGGAGGGGGCACTACACCTTCTGG TTTTTCACCACCTTCCAGTGCGCTCCGGCTGGACACCAGCATGTGAGTTTAAACTTTCGT GGAATAAACTATTCAGCTGAAGTGTATTTGAATGGGCATAAAGAGGTACTTCCAAAAGGA ATGTTCCGAAGGCACACCCTCGATATTACTGATGTTCTTCGTCCGGATGGTAAAAATCTG CTTGCTGTTCTTGTTCATCCTCCTGTTCATCCTGGTGCAATTCCTCCTCAAGGAGGTCAG GGTGGTGATCATGAGATTGGGAAGGATGTTGCTACTCAATATGTTGAAGGATGGGACTGG ATGTGTCCAATAAGGGATCGAAACACTGGTATCTGGGATGAAGTATCAATATCCGTAACT GGGCCTGTGAGGATAATGGACCCCCACCTAGTTTCAACTTTTTATGATGATTTTAAGAGG TCATATCTGCACTGCACGCTTCAGTTGGAGAACAGAAGTTCATGGCTTTCAGATTGTAAA TTGAAAATTCAAGTTTCAACTGAACTCGAGGGGAACATTTGCCTGGTGGAACATCTACAG AGTTATGAGATATCAGTTCCTCCTAACTCAGTTCTAGAGTACACTATTCCTCCTTTGTTC TTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTTATACAATGTT GAGATTGGTGTGGATGCCAATGGATTCGGTGAATCTGATTCATCGAATCATCATTTTGGA TTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGTGGGAGGATCTTCAAGGTAAAT GGTGAACCTGTTTTCATCCGAGGAGGGAACTGGATATTGTCAGATGGCCTTCTTCGATTA ACAAGGAAGCGGTATATGACTGACATCAAGTTTCATGCTGATATGAACTTTAATATGCTT CGCTGTTGGGGTGGTGGATTAGCAGAAAGGCCTGATTTTTATCATTTTTGTGATATCTAT GGTTTGATGGTTTGGCAGGAATTCTGGATAACTGGAGATGTTGATGGACGAGGAATTCCA ATATCAAATCCAAATGGTCCTTTGGACCATGATCTCTTCCTTCTATGTGCTAGAGATACT GTCAAATTACTTAGGAATCATGCTAGCCTAGCTCTATGGGTTGGTGGAAATGAACAAGTC CCACCAGTTGACATTAACAAAGCACTGAAGAATGATCTGAAGTTACATCCTATGTTTGTA AGTAACCATACAACAAAAAGTCCAGGAAAGGATATATCAGAAGACCCAACTGACCCAAGT AAATACCTTGATGGCACTCGAGTGTACGTCCAAGGATCAATGTGGGATGGTTTTGCCAAT GGGAAAGGCGACTTTACTGATGGTCCATATGAGATTCAATATCCAGAGAGCTTTTTCAAG GACAGTTTCTACAAATATGGGTTTAATCCTGAAGTTGGGTCTGTTGGGGTTCCAGTTGCA GCAACAATTAGAGCAACAATGCCCTCAGAAGGTTGGAGCATTCCAATTTTTAAGAAGAGG ATCGATGGGTACATAAATGAAGTACCAAATCCAATATGGGATTACCACAAGTACATCCCC TACTCAAAACCAGGGAAAGTCCATGATCAGATTGAACTGTATGGCCATCCAAGTGATCTC GACGATTTCTGTGAAAAAGCACAATTGGTCAATTATGTTCAGTACAGAGCACTTCTGGAA GGATGGACTTCTTTCATGTGGACAAAGTTTACAGGTGTTTTAATTTGGAAGACACAAAAT CCATGGACTGGGCTACGAGGACAGTTCTATGATCATCTCCTAGATCAAACAGCTGGGTTT TATGGTTGCCGTTGTGCTGCTGAACCAATTCATGTACAGCTGAATTTGGATAGTTACTTC ATAGAGGTGGTAAACACTACAGCCGATGAACTTCGGGATGTGGCTGTCGAAATTTCAGCA TGGGATCTAGATGGCGCGTCCCCATATTACAGAGTTACTGAGAAAATAGCAGTGCCACCA AAAAAAGTGCAGCAAGTCACGGAGATGTCATATCCTAAGACGAAGAACCCAAAGCCTGTA TATTTTCTACTTCTCAAACTTTTTAAGCTGTCAGACAACCAGGTACTCTCCAGGAACTTT TACTGGCTACATCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCGTCAGAAACAG ATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAAGGTCAGAATG TCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCATGAATCTAGCC GATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACATAGCAGTGGC CTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAACGTAAGAACA GTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTCGGTACACACA TCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGAATCCTCCCTGTCCACTAC TCCGACAACTACTTCTCCCTCGTACCGGGGGAGAAGATGGCCATCGACATCTCGTTCGAG GCCCCCCAGGGATCCACCCCCAGGGTCATTCTGAAAGGCTGGAACTATCACCTGGACCAT GCAGTGACGTTATAG

Peptide Sequence

PEP ID	Os05t0391500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:19010877:19019470:1 gene:Os05g0391500 transcript:Os05t0391500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Endo-beta-mannosidase. (Os05t0391500-01)
Sequence	MAAAAAAAAAAAAEVGKRVLDTGWLAARSTEVALTGEQLTTTDPPPADPEPTAPWMHAAV PGTVLGTLLKNKLIPDPFYGLNNESIIDIAKSGRGHYTFWFFTTFQCAPAGHQHVSLNFR GINYSAEVYLNGHKEVLPKGMFRRHTLDITDVLRPDGKNLLAVLVHPPVHPGAIPPQGGQ GGDHEIGKDVATQYVEGWDWMCPIRDRNTGIWDEVSISVTGPVRIMDPHLVSTFYDDFKR SYLHCTLQLENRSSWLSDCKLKIQVSTELEGNICLVEHLQSYEISVPPNSVLEYTIPPLF FYKPNLWWPNGMGKQSLYNVEIGVDANGFGESDSSNHHFGFRKIESTIDGSTGGRIFKVN GEPVFIRGGNWILSDGLLRLTRKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDIY GLMVWQEFWITGDVDGRGIPISNPNGPLDHDLFLLCARDTVKLLRNHASLALWVGGNEQV PPVDINKALKNDLKLHPMFVSNHTTKSPGKDISEDPTDPSKYLDGTRVYVQGSMWDGFAN GKGDFTDGPYEIQYPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPSEGWSIPIFKKR IDGYINEVPNPIWDYHKYIPYSKPGKVHDQIELYGHPSDLDDFCEKAQLVNYVQYRALLE GWTSFMWTKFTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLDSYF IEVVNTTADELRDVAVEISAWDLDGASPYYRVTEKIAVPPKKVQQVTEMSYPKTKNPKPV YFLLLKLFKLSDNQVLSRNFYWLHLPGKDYKLLEQYRQKQIPLKINSKISISGSGYKVRM SIENRSKKPENANVSTMNLADANGSDRTGEEAIQDGHSSGLWGKIRRGLIITRSDDNVRT VEVKGADSGVSFFLHFSVHTSEPSSSQDVYKDTRILPVHYSDNYFSLVPGEKMAIDISFE APQGSTPRVILKGWNYHLDHAVTL

Transcript Sequence

Transcript ID	Os05t0391500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:19010877:19019470:1 gene:Os05g0391500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Endo-beta-mannosidase. (Os05t0391500-01)
Sequence	AACCGGAATGCTTGCGTTTGCGTGAGCTCCAAAACCCCCACACCCCACTCGCCAACGCCA AAGCCATCGGCGGCGTGGACTCCTCCCAGAAATCCGTAGATAGGTGGCGTCCTAGCGATC GGGAGCGGAGATGGCTGCTGCTGCTGCGGCTGCGGCGGCGGCGGCGGCCGAAGTGGGGAA GCGGGTGCTCGACACGGGCTGGCTCGCCGCGCGCTCCACCGAGGTGGCCCTCACCGGCGA GCAGCTCACCACCACCGACCCGCCGCCCGCCGACCCGGAGCCGACGGCACCCTGGATGCA CGCCGCCGTCCCCGGCACCGTGCTGGGGACGCTGCTGAAGAACAAGCTGATCCCCGACCC CTTCTACGGCCTCAACAACGAGTCGATCATCGACATCGCCAAATCCGGGAGGGGGCACTA CACCTTCTGGTTTTTCACCACCTTCCAGTGCGCTCCGGCTGGACACCAGCATGTGAGTTT AAACTTTCGTGGAATAAACTATTCAGCTGAAGTGTATTTGAATGGGCATAAAGAGGTACT TCCAAAAGGAATGTTCCGAAGGCACACCCTCGATATTACTGATGTTCTTCGTCCGGATGG TAAAAATCTGCTTGCTGTTCTTGTTCATCCTCCTGTTCATCCTGGTGCAATTCCTCCTCA AGGAGGTCAGGGTGGTGATCATGAGATTGGGAAGGATGTTGCTACTCAATATGTTGAAGG ATGGGACTGGATGTGTCCAATAAGGGATCGAAACACTGGTATCTGGGATGAAGTATCAAT ATCCGTAACTGGGCCTGTGAGGATAATGGACCCCCACCTAGTTTCAACTTTTTATGATGA TTTTAAGAGGTCATATCTGCACTGCACGCTTCAGTTGGAGAACAGAAGTTCATGGCTTTC AGATTGTAAATTGAAAATTCAAGTTTCAACTGAACTCGAGGGGAACATTTGCCTGGTGGA ACATCTACAGAGTTATGAGATATCAGTTCCTCCTAACTCAGTTCTAGAGTACACTATTCC TCCTTTGTTCTTCTATAAGCCAAACCTGTGGTGGCCGAATGGCATGGGAAAGCAATCCTT ATACAATGTTGAGATTGGTGTGGATGCCAATGGATTCGGTGAATCTGATTCATCGAATCA TCATTTTGGATTCCGTAAGATTGAGAGTACAATTGATGGTTCTACCGGTGGGAGGATCTT CAAGGTAAATGGTGAACCTGTTTTCATCCGAGGAGGGAACTGGATATTGTCAGATGGCCT TCTTCGATTAACAAGGAAGCGGTATATGACTGACATCAAGTTTCATGCTGATATGAACTT TAATATGCTTCGCTGTTGGGGTGGTGGATTAGCAGAAAGGCCTGATTTTTATCATTTTTG TGATATCTATGGTTTGATGGTTTGGCAGGAATTCTGGATAACTGGAGATGTTGATGGACG AGGAATTCCAATATCAAATCCAAATGGTCCTTTGGACCATGATCTCTTCCTTCTATGTGC TAGAGATACTGTCAAATTACTTAGGAATCATGCTAGCCTAGCTCTATGGGTTGGTGGAAA TGAACAAGTCCCACCAGTTGACATTAACAAAGCACTGAAGAATGATCTGAAGTTACATCC TATGTTTGTAAGTAACCATACAACAAAAAGTCCAGGAAAGGATATATCAGAAGACCCAAC TGACCCAAGTAAATACCTTGATGGCACTCGAGTGTACGTCCAAGGATCAATGTGGGATGG TTTTGCCAATGGGAAAGGCGACTTTACTGATGGTCCATATGAGATTCAATATCCAGAGAG CTTTTTCAAGGACAGTTTCTACAAATATGGGTTTAATCCTGAAGTTGGGTCTGTTGGGGT TCCAGTTGCAGCAACAATTAGAGCAACAATGCCCTCAGAAGGTTGGAGCATTCCAATTTT TAAGAAGAGGATCGATGGGTACATAAATGAAGTACCAAATCCAATATGGGATTACCACAA GTACATCCCCTACTCAAAACCAGGGAAAGTCCATGATCAGATTGAACTGTATGGCCATCC AAGTGATCTCGACGATTTCTGTGAAAAAGCACAATTGGTCAATTATGTTCAGTACAGAGC ACTTCTGGAAGGATGGACTTCTTTCATGTGGACAAAGTTTACAGGTGTTTTAATTTGGAA GACACAAAATCCATGGACTGGGCTACGAGGACAGTTCTATGATCATCTCCTAGATCAAAC AGCTGGGTTTTATGGTTGCCGTTGTGCTGCTGAACCAATTCATGTACAGCTGAATTTGGA TAGTTACTTCATAGAGGTGGTAAACACTACAGCCGATGAACTTCGGGATGTGGCTGTCGA AATTTCAGCATGGGATCTAGATGGCGCGTCCCCATATTACAGAGTTACTGAGAAAATAGC AGTGCCACCAAAAAAAGTGCAGCAAGTCACGGAGATGTCATATCCTAAGACGAAGAACCC AAAGCCTGTATATTTTCTACTTCTCAAACTTTTTAAGCTGTCAGACAACCAGGTACTCTC CAGGAACTTTTACTGGCTACATCTTCCTGGAAAAGACTACAAGTTGTTGGAACAGTATCG TCAGAAACAGATACCACTGAAGATCAACTCTAAGATTTCCATCTCAGGCTCTGGATACAA GGTCAGAATGTCCATAGAGAACAGATCAAAGAAACCAGAAAACGCTAACGTATCAACCAT GAATCTAGCCGATGCAAACGGTTCCGACAGAACCGGAGAAGAAGCCATCCAGGATGGACA TAGCAGTGGCCTGTGGGGGAAAATCCGCAGAGGCCTCATCATCACAAGGTCAGATGACAA CGTAAGAACAGTGGAGGTGAAAGGGGCCGATTCAGGCGTCTCGTTTTTCCTCCATTTCTC GGTACACACATCTGAGCCATCATCCAGTCAGGATGTTTACAAGGACACAAGAATCCTCCC TGTCCACTACTCCGACAACTACTTCTCCCTCGTACCGGGGGAGAAGATGGCCATCGACAT CTCGTTCGAGGCCCCCCAGGGATCCACCCCCAGGGTCATTCTGAAAGGCTGGAACTATCA CCTGGACCATGCAGTGACGTTATAGTAAGAGTACTTCAACTAGCCTGTCAAAATGTGGCC GTGTCGGGGACGGGACAAGATCCCACAGAGCAAGTAGTACATCTCCCTACAATAAAGTGC AGGTAGCGACTTCAAATCGTGACATTGCATGAGCAGTGGGTGTGAATTATTTGTGGTGCC CATCACCTCCGTGATTCCGTCAGAGACGATCTCAGACGCTCAGGCTCCTGCGTTGTTGAC GGTGTCGGCGCCAACCAACAACTTGGGTAAATGTTTGTTTGGGCCAGAACCATTAATAAA AGGGTCACCGTAGTACAATCATCGACCCCTGCATCCAGATGCAGCGACGCAAACGGGGCT AGCATATGCATTTCTATCCATTTTTTCTGCTGCCATTCATTTCCATTGAATCTGGACGAG AGAATCATGGCATTCCTGTTACTCCGATACTTCCTCCGTCTGGCGTTTGTAAGACTATCA TACGGGTAGTTGTGTAAACAAACTAACAGAGGTCTTTTGTACGGCTCTTTGTAAAGAAAA TGGAATCTGTGTGCTCCTATT