Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0390600-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:18941617:18942774:-1 gene:Os05g0390600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0390600-00)
Sequence

ATGGGCAGGTCAAGAGGCAAGGATGGCGGCGGGAGGTCGTTCCCGTCGCCGGCGTCGTCG
TCGTCGGCGTCGTCGTCGGAGTTCGAGTTCACGGTCACGCTGTCGCCGGCGTCGAAGCAG
AGGTCGGCGGCGCAGCTGTGCCCGGCGGACGAGCTGTTCTACAAGGGCCAGCTCCTGCCG
CTGCAGCTGTCGCCGCGCATCTCCATGGTGCGCACGCTGCTGCTCTCGTCGGCGTCGACC
TCCTCCGCGTCGGCCTCCGACTCCACCTCCAACTCGTCCTCCTCCCGCGACTCCAACGGC
AGCACGTCGTCGTCCTTCTCCGCCGACTGCGCCGCGCTGCTGCTCCCGGACTCTGCCGCC
TCCTCCTCCCGCCCCAGCTCCGCCACCGAGGACGACCGCCACCTCGCCCCGCCGCCGCCG
CCGCCGGGTGTCGCTGCCTCGTTCGCCGCCAAGCGCACCGGCAAGCAGTACCTCTCGTCG
TTCGCCACCCGCTTCTCCTCCGTCTTCCACCGCGGCGGCGCCCCCGCCCCCGCCGCCGCC
GCCGCCAACGCCAAGAAGCCGCCGTCCAAGTCGCTCGCCAAGGAGGTGATCAAGAAGTAC
GCCAAGAAGGTGAAGCCGCTGTACGAGAAGCTCTCCCAGATCCCCAAGAATCAGAGCAAC
AGCAGCGGCCAGCCGCTGCAGCAGCAGCAGCAGCAGGGGTTGAAGAAGCCGTTCAGCTTC
TCGATGCGCAAGAAGCGCGGCGACGACGACCACGCCGCAGCGGCCCCGGCCGCGGCGGCC
GCCGTGGCCGCGGAGGTGGGCGGCGGCGGCAAGTACGCGCACTCCAACTCCTTCTCCGGG
AACCTCCGGTTCCCGCGCCAGAAGCGGTGCGCGGCGAGCTGCCCGTCCTCGATGCGCTCC
TCGCCGAGCCACTCCGGCCTGCTCACCTTCGGCGGCGCGGGCGGCGTCGGCTTCCCCGAC
GTGCCAGCCGCCGCCGCGGCGGCGATGTCCGGCGGCATTAGCGTGGGCCCCGTGTCGCTG
TCCACGGCGTCGTCGATGGAGGAGCTCCAGAGCGCCATCGAGGGCGCCATCGCGCACTGC
AAGAGCACAATGGGCGGCGCCGTGACCATGTGCTCGCGCAAGGCGGCGGCGGCCGCCGAC
GAGATCTGCGCGTTCTGA

Peptide Sequence

PEP ID

Os05t0390600-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:18941617:18942774:-1 gene:Os05g0390600 transcript:Os05t0390600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0390600-00)
Sequence

MGRSRGKDGGGRSFPSPASSSSASSSEFEFTVTLSPASKQRSAAQLCPADELFYKGQLLP
LQLSPRISMVRTLLLSSASTSSASASDSTSNSSSSRDSNGSTSSSFSADCAALLLPDSAA
SSSRPSSATEDDRHLAPPPPPPGVAASFAAKRTGKQYLSSFATRFSSVFHRGGAPAPAAA
AANAKKPPSKSLAKEVIKKYAKKVKPLYEKLSQIPKNQSNSSGQPLQQQQQQGLKKPFSF
SMRKKRGDDDHAAAAPAAAAAVAAEVGGGGKYAHSNSFSGNLRFPRQKRCAASCPSSMRS
SPSHSGLLTFGGAGGVGFPDVPAAAAAAMSGGISVGPVSLSTASSMEELQSAIEGAIAHC
KSTMGGAVTMCSRKAAAAADEICAF

Transcript Sequence

Transcript ID

Os05t0390600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:18941617:18942774:-1 gene:Os05g0390600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0390600-00)
Sequence

ATGGGCAGGTCAAGAGGCAAGGATGGCGGCGGGAGGTCGTTCCCGTCGCCGGCGTCGTCG
TCGTCGGCGTCGTCGTCGGAGTTCGAGTTCACGGTCACGCTGTCGCCGGCGTCGAAGCAG
AGGTCGGCGGCGCAGCTGTGCCCGGCGGACGAGCTGTTCTACAAGGGCCAGCTCCTGCCG
CTGCAGCTGTCGCCGCGCATCTCCATGGTGCGCACGCTGCTGCTCTCGTCGGCGTCGACC
TCCTCCGCGTCGGCCTCCGACTCCACCTCCAACTCGTCCTCCTCCCGCGACTCCAACGGC
AGCACGTCGTCGTCCTTCTCCGCCGACTGCGCCGCGCTGCTGCTCCCGGACTCTGCCGCC
TCCTCCTCCCGCCCCAGCTCCGCCACCGAGGACGACCGCCACCTCGCCCCGCCGCCGCCG
CCGCCGGGTGTCGCTGCCTCGTTCGCCGCCAAGCGCACCGGCAAGCAGTACCTCTCGTCG
TTCGCCACCCGCTTCTCCTCCGTCTTCCACCGCGGCGGCGCCCCCGCCCCCGCCGCCGCC
GCCGCCAACGCCAAGAAGCCGCCGTCCAAGTCGCTCGCCAAGGAGGTGATCAAGAAGTAC
GCCAAGAAGGTGAAGCCGCTGTACGAGAAGCTCTCCCAGATCCCCAAGAATCAGAGCAAC
AGCAGCGGCCAGCCGCTGCAGCAGCAGCAGCAGCAGGGGTTGAAGAAGCCGTTCAGCTTC
TCGATGCGCAAGAAGCGCGGCGACGACGACCACGCCGCAGCGGCCCCGGCCGCGGCGGCC
GCCGTGGCCGCGGAGGTGGGCGGCGGCGGCAAGTACGCGCACTCCAACTCCTTCTCCGGG
AACCTCCGGTTCCCGCGCCAGAAGCGGTGCGCGGCGAGCTGCCCGTCCTCGATGCGCTCC
TCGCCGAGCCACTCCGGCCTGCTCACCTTCGGCGGCGCGGGCGGCGTCGGCTTCCCCGAC
GTGCCAGCCGCCGCCGCGGCGGCGATGTCCGGCGGCATTAGCGTGGGCCCCGTGTCGCTG
TCCACGGCGTCGTCGATGGAGGAGCTCCAGAGCGCCATCGAGGGCGCCATCGCGCACTGC
AAGAGCACAATGGGCGGCGCCGTGACCATGTGCTCGCGCAAGGCGGCGGCGGCCGCCGAC
GAGATCTGCGCGTTCTGA