Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0390500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:18928206:18933263:1 gene:Os05g0390500 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os05t0390500-01)
Sequence	ATGAGCCTCGCCGCCGAGTCGCCGTCGCCGTCCTCCCCGTCGTCGTCGAGCGGCAGCGAC GACTTCGCGGCGCTCCTCGACGCGGAGCTCGAGCTGACCTCCGCCGCCGACTCGGCCTCC GCCGGAGACCCCTCCGCCGCCACCGACGACGACGACGAAGGTGGTGACGAGGAGGAGGAG GATGTGGTGGTGGTCGTGGAACAAGAGGACGCCATCGTAGAGCAGAGCAGTACCAAACGG CGTAGAGTGGAGGACCAACACCGTCATCAAGCAGTAGTAATGAAGTCAGATGAGGATACC GTTGGTTCTTCTAAAGATGTTAAAATTGATGAATGCCCACCACATCCTGGGTTTTTTGGT GGACTTTGCTATAGATGTGGGAAAAGACAAGATGAGGAAGATGTTCCAGGAGTTGCTTTT GGTTACATCCATAAGGGTTTGAGGCTAGGTACAACAGAAATTGACAGACTGCGTGGAGCT GATTTAAAGAATTTATTGCGAGAAAGAAAACTAGTACTCATTTTGGACTTGGATCATACA CTGATCAACTCAACCAAACTCTTTGATCTTTCTGCTGCTGAAAACGAATTGGGAATTCAA TCTGCTGCTAAAGAAGTTGTTCCGGACAGAAGCTTGTTCACATTGGAGACAATGCAGATG CTTACAAAGTTGAGACCATTTGTCCGTAGATTTTTAAAAGAAGCAAGTGATATGTTTGAG ATGTATATATACACTATGGGTGACAAGGCTTATGCAATTGAAATAGCAAAACTTCTTGAC CCTGATAATGTATATTTTGGCTCAAAGGTGATTTCGAACTCTGATTGCACTCAGCGACAC CAGAAAGGTCTTGATGTGGTTCTTGGAGATGAAAGTGTTGCAGTGATTCTTGATGACACT GAGTATGTGTGGCAGAAACATAAAGAAAATCTGATTCTAATGGAGAGATATCATTATTTT GCTTCTAGTTGTCGCCAATTTGGTTTTGGTGCCAGATCTTTGTCAGAGACAATGCAGGAC GAAAGGGAGAATGATGGTGCTTTAGCTACAATTTTAGATGTCTTGGAGCGCATACACACA ATTTTCTTTGATCCGGATGATCAAAAACCTCTTTCTTCACGGGATGTAAGACAGGTGATC AAGAGGGTACGGCAGGAAGTACTTCAAGGCTGCAAACTAGTGTTTACGCGTGTATTCCCG TTACATCAGCGCCAACAAGATCAGATGATCTGGAAGATGGCCGAGCAGTTGGGTGCCGTT TGCTGCACAGATGTGGATTCTACGGTCACCCATGTTGTTGCTTTGGATCTAGGAACGGAG AAGGCTCGCTGGGCTGTTAGTAACAAGAAGTTTTTGGTCCACCCCCGCTGGATTGAGGCC GCAAATTTCCGATGGCAACGGCAACAAGAGGAGGATTTTCCTGTAGCTCGACCAAAGGAG AAGGGTAAAGAAAATGCCGCTGATGCTCCTATCTCAAAGGAGAACGGTGACAAAAATGCC GCTGATGCTGCTAACGCAAAGAAGGGTAACGAAAATGTCGCTGATGCTGGTAGCACAAAG GAGGGGAGTAAAGAAAATGCTGATGATGCTGCTAACTCAGAGGAGGAGTAA

Peptide Sequence

PEP ID	Os05t0390500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:18928206:18933263:1 gene:Os05g0390500 transcript:Os05t0390500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os05t0390500-01)
Sequence	MSLAAESPSPSSPSSSSGSDDFAALLDAELELTSAADSASAGDPSAATDDDDEGGDEEEE DVVVVVEQEDAIVEQSSTKRRRVEDQHRHQAVVMKSDEDTVGSSKDVKIDECPPHPGFFG GLCYRCGKRQDEEDVPGVAFGYIHKGLRLGTTEIDRLRGADLKNLLRERKLVLILDLDHT LINSTKLFDLSAAENELGIQSAAKEVVPDRSLFTLETMQMLTKLRPFVRRFLKEASDMFE MYIYTMGDKAYAIEIAKLLDPDNVYFGSKVISNSDCTQRHQKGLDVVLGDESVAVILDDT EYVWQKHKENLILMERYHYFASSCRQFGFGARSLSETMQDERENDGALATILDVLERIHT IFFDPDDQKPLSSRDVRQVIKRVRQEVLQGCKLVFTRVFPLHQRQQDQMIWKMAEQLGAV CCTDVDSTVTHVVALDLGTEKARWAVSNKKFLVHPRWIEAANFRWQRQQEEDFPVARPKE KGKENAADAPISKENGDKNAADAANAKKGNENVADAGSTKEGSKENADDAANSEEE

Transcript Sequence

Transcript ID	Os05t0390500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18928206:18933263:1 gene:Os05g0390500 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os05t0390500-01)
Sequence	GCGCATCCACCCACCCCAACCGACCAAAGCTCGCCCCTTTGCCCTCGGTCATGAGCCTCG CCGCCGAGTCGCCGTCGCCGTCCTCCCCGTCGTCGTCGAGCGGCAGCGACGACTTCGCGG CGCTCCTCGACGCGGAGCTCGAGCTGACCTCCGCCGCCGACTCGGCCTCCGCCGGAGACC CCTCCGCCGCCACCGACGACGACGACGAAGGTGGTGACGAGGAGGAGGAGGATGTGGTGG TGGTCGTGGAACAAGAGGACGCCATCGTAGAGCAGAGCAGTACCAAACGGCGTAGAGTGG AGGACCAACACCGTCATCAAGCAGTAGTAATGAAGTCAGATGAGGATACCGTTGGTTCTT CTAAAGATGTTAAAATTGATGAATGCCCACCACATCCTGGGTTTTTTGGTGGACTTTGCT ATAGATGTGGGAAAAGACAAGATGAGGAAGATGTTCCAGGAGTTGCTTTTGGTTACATCC ATAAGGGTTTGAGGCTAGGTACAACAGAAATTGACAGACTGCGTGGAGCTGATTTAAAGA ATTTATTGCGAGAAAGAAAACTAGTACTCATTTTGGACTTGGATCATACACTGATCAACT CAACCAAACTCTTTGATCTTTCTGCTGCTGAAAACGAATTGGGAATTCAATCTGCTGCTA AAGAAGTTGTTCCGGACAGAAGCTTGTTCACATTGGAGACAATGCAGATGCTTACAAAGT TGAGACCATTTGTCCGTAGATTTTTAAAAGAAGCAAGTGATATGTTTGAGATGTATATAT ACACTATGGGTGACAAGGCTTATGCAATTGAAATAGCAAAACTTCTTGACCCTGATAATG TATATTTTGGCTCAAAGGTGATTTCGAACTCTGATTGCACTCAGCGACACCAGAAAGGTC TTGATGTGGTTCTTGGAGATGAAAGTGTTGCAGTGATTCTTGATGACACTGAGTATGTGT GGCAGAAACATAAAGAAAATCTGATTCTAATGGAGAGATATCATTATTTTGCTTCTAGTT GTCGCCAATTTGGTTTTGGTGCCAGATCTTTGTCAGAGACAATGCAGGACGAAAGGGAGA ATGATGGTGCTTTAGCTACAATTTTAGATGTCTTGGAGCGCATACACACAATTTTCTTTG ATCCGGATGATCAAAAACCTCTTTCTTCACGGGATGTAAGACAGGTGATCAAGAGGGTAC GGCAGGAAGTACTTCAAGGCTGCAAACTAGTGTTTACGCGTGTATTCCCGTTACATCAGC GCCAACAAGATCAGATGATCTGGAAGATGGCCGAGCAGTTGGGTGCCGTTTGCTGCACAG ATGTGGATTCTACGGTCACCCATGTTGTTGCTTTGGATCTAGGAACGGAGAAGGCTCGCT GGGCTGTTAGTAACAAGAAGTTTTTGGTCCACCCCCGCTGGATTGAGGCCGCAAATTTCC GATGGCAACGGCAACAAGAGGAGGATTTTCCTGTAGCTCGACCAAAGGAGAAGGGTAAAG AAAATGCCGCTGATGCTCCTATCTCAAAGGAGAACGGTGACAAAAATGCCGCTGATGCTG CTAACGCAAAGAAGGGTAACGAAAATGTCGCTGATGCTGGTAGCACAAAGGAGGGGAGTA AAGAAAATGCTGATGATGCTGCTAACTCAGAGGAGGAGTAAAGAAAATGCTGATGATGCT GCTAACGCAGAGAAGAGTAAATCTGATGGTGCTGCCAGCGGTGCAACTGGCTCGTAACCA GCTTATACCTTTTGTAAACCGTTGCGGACATTGCTGTAGCTGCGAACCTACATTAGGATA CGTACTCTTGCGAAATAGAAATTGTGGCTAGTTTGAATCGGACTGTGCGGATGATGGTGT TATGGTACATGTGAGATTTTTCCTACT