Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0387200-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:18740096:18741856:1 gene:Os05g0387200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1). (Os05t0387200-01);Similar to UDP-sulfoquinovose synthase. (Os05t0387200-02)
Sequence	GAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCAAATATTGACATT GAAGAAGGGTTCATCACTATTACCCACAATGGAAGAACTGATACCTTGCCTTACCCAAAG CAAGCGAGCTCCTTCTACCATCTAAGCAAAGTGCATGACTCGCACAATATAGCATTTACA TGCAAGGCTTGGGGTATAAGGGCCACGGATCTTAACCAAGGTGTTGTATATGGAGTGAGA ACAGATGAAACTGCAATGCATGAAGAACTATCCAACAGGTTTGATTATGATGGCGTCTTT GGGACAGCACTGAATAGGTTCTGTGTTCAGGCTGCTGTAGGTCATCCACTTACAGTTTAT GGAAAAGGTGGTCAGACCCGTGGATATCTGGACATCAGGGATACAGTGCAATGCGTAGAG CTCGCAATCGCCAACCCAGCCAAACCAGGTGAGTTCAGGGTCTTCAACCAGTTCACCGAG CAGTTCTCGGTCAACGAGCTGGCAAAGCTGGTTACGGCCGCCGGTGCAAAGCTTGGGCTG GAGGTGCAGACCAAGTCGGTGCCCAACCCGCGGGTGGAAGCGGAGGAACACTACTACAAC GCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTC CTCGACTCGCTGCTCAACTTCGCCGTCCAGTACAAGGACAGGGTCGACACGGCGCAGATC ATGCCCAGCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAA

Peptide Sequence

PEP ID	Os05t0387200-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:18740096:18741856:1 gene:Os05g0387200 transcript:Os05t0387200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1). (Os05t0387200-01);Similar to UDP-sulfoquinovose synthase. (Os05t0387200-02)
Sequence	ECHLVKLGTMGEYGTPNIDIEEGFITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT CKAWGIRATDLNQGVVYGVRTDETAMHEELSNRFDYDGVFGTALNRFCVQAAVGHPLTVY GKGGQTRGYLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFSVNELAKLVTAAGAKLGL EVQTKSVPNPRVEAEEHYYNAKHTKLMELGLEPHLLSDSLLDSLLNFAVQYKDRVDTAQI MPSVSWKKMGAKPKTVSV

Transcript Sequence

Transcript ID	Os05t0387200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18740096:18741856:1 gene:Os05g0387200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1). (Os05t0387200-01);Similar to UDP-sulfoquinovose synthase. (Os05t0387200-02)
Sequence	GAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCAAATATTGACATT GAAGAAGGGTTCATCACTATTACCCACAATGGAAGAACTGATACCTTGCCTTACCCAAAG CAAGCGAGCTCCTTCTACCATCTAAGCAAAGTGCATGACTCGCACAATATAGCATTTACA TGCAAGGCTTGGGGTATAAGGGCCACGGATCTTAACCAAGGTGTTGTATATGGAGTGAGA ACAGATGAAACTGCAATGCATGAAGAACTATCCAACAGGTTTGATTATGATGGCGTCTTT GGGACAGCACTGAATAGGTTCTGTGTTCAGGCTGCTGTAGGTCATCCACTTACAGTTTAT GGAAAAGGTGGTCAGACCCGTGGATATCTGGACATCAGGGATACAGTGCAATGCGTAGAG CTCGCAATCGCCAACCCAGCCAAACCAGGTGAGTTCAGGGTCTTCAACCAGTTCACCGAG CAGTTCTCGGTCAACGAGCTGGCAAAGCTGGTTACGGCCGCCGGTGCAAAGCTTGGGCTG GAGGTGCAGACCAAGTCGGTGCCCAACCCGCGGGTGGAAGCGGAGGAACACTACTACAAC GCCAAGCACACCAAGCTCATGGAGCTCGGCCTGGAGCCCCACCTGCTGTCGGACTCGCTC CTCGACTCGCTGCTCAACTTCGCCGTCCAGTACAAGGACAGGGTCGACACGGCGCAGATC ATGCCCAGCGTGTCGTGGAAGAAGATGGGGGCGAAGCCGAAGACGGTGTCCGTCTAAGAG GAGGCTGGTTTTGCCATGGCGGGGTATAATGTCAACCGTGACATTGACATTATAAATTTG GTGTGTAGTAATGCAATAATTATGTGCGTTTAGTATAATGCACGTTGTAGTGGGTGTGGT TACGGTGTTAGATTTCTTTTTTGTTCTTCCTCACGAATAGATGCTGCAATCTGATCGAAG GGGATTCCTTCTGTATTTCTGTTGTAAACTTTTATCCAGCTCTTGATCAGCAAATGGGTA TCCAGGATGCAGGGGGGTATTTGAGCCTTTTTTTTTTTTTGAGTGTTTCCGAACTGAAGA TGGTGTAATAATACCATACATACCACTAATTTCTTTTATTGTT