Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0386000-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:18680791:18685421:1 gene:Os05g0386000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Root determined nodulation 1. (Os05t0386000-01);Similar to Root determined nodulation 1. (Os05t0386000-02);Similar to predicted protein. (Os05t0386000-03);Conserved hypothetical protein. (Os05t0386000-04)
Sequence	ATGAGCGGGAGGAAGAATGCCGGCAAGGCCTCGCCGTTTCTGCTCCTCCTCATCTCGGTG GGCTGCTTCTTCGCGACCTACAACTTCCTGACGATGGTGGGCCACGGCCGGAGCCGGGAC GCCGGGCCGCGGAAGATTCTCGGCGGCGTCGGCGGCGTCGGCGGCGGCGGCTCGGACCCG TCGAAGAGGTTCCACGTCGCGCTCACGGCGACGGACGCGCTCTACAGCCAGTGGCAGTCG CGGGTGATGTACTACTGGTACAGGGAGATGAGGGATCGGCCTGGCTCCGACATGGGCGGC TTCACGCGGATCCTGCACTCCGGGAAGCCCGACGGATTGATGGATGAGATACCTACCTTG GTGGTTGATCCCCTCCCCGAAGGCGCGGATCGAGGTTACATTGTCCTAAACAGGCCTTGG GCATTTGTTCAATGGCTGAAGAAATCAAACATCAAAGAAGACTATGTACTTATGGCTGAG CCAGATCACATCTTTGTGAGGCCATTGCCAAACTTAGCTCATGGCGACGAACCTGCTGCG TTTCCCTTCTTCTACATCAAACCAACTGAAAATGAAATAATACTGAGGAAGTTCTTTCCT GAAGAAAATGGACCAGTCTCAAAAATTGATCCTATTGGTAATTCCCCAGTGATTATCAAG AAGGCCCAGCTTGAGAAGATTGCTCCAACTTGGATGAATATTTCGTTGAAAATGAAAGAG GATGTGGAGACAGACAAAGCTTTTGGATGGGTCTTGGAAATGTATGCATATGCTGTCGCT AGTGCATTGCATGGTGTGCACTACAGCCTTCGTAAGGATTTTATGATTCAGCCTCCTTGG GACGCGAAATCGGACAACACATTCATCATCCATTACACTTATGGGTGTGATTATACATTA AAGGGTGAGCTAACTTATGGGAAAATAGGGGAATGGCGGTTTGACAAAAGATCTTATCTT CGTTCACCACCGCCAAGAAATCTTACATTACCTCCTCCAGGAGTTCCCGAAAGTGTGGCC ACCCTTGTGAAAATGGTCAATGAAGCCACTGCAAACATTCCAGGGTGGGACGAAGAAAGG TGA

Peptide Sequence

PEP ID	Os05t0386000-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:18680791:18685421:1 gene:Os05g0386000 transcript:Os05t0386000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Root determined nodulation 1. (Os05t0386000-01);Similar to Root determined nodulation 1. (Os05t0386000-02);Similar to predicted protein. (Os05t0386000-03);Conserved hypothetical protein. (Os05t0386000-04)
Sequence	MSGRKNAGKASPFLLLLISVGCFFATYNFLTMVGHGRSRDAGPRKILGGVGGVGGGGSDP SKRFHVALTATDALYSQWQSRVMYYWYREMRDRPGSDMGGFTRILHSGKPDGLMDEIPTL VVDPLPEGADRGYIVLNRPWAFVQWLKKSNIKEDYVLMAEPDHIFVRPLPNLAHGDEPAA FPFFYIKPTENEIILRKFFPEENGPVSKIDPIGNSPVIIKKAQLEKIAPTWMNISLKMKE DVETDKAFGWVLEMYAYAVASALHGVHYSLRKDFMIQPPWDAKSDNTFIIHYTYGCDYTL KGELTYGKIGEWRFDKRSYLRSPPPRNLTLPPPGVPESVATLVKMVNEATANIPGWDEER

Transcript Sequence

Transcript ID	Os05t0386000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18680791:18685421:1 gene:Os05g0386000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Root determined nodulation 1. (Os05t0386000-01);Similar to Root determined nodulation 1. (Os05t0386000-02);Similar to predicted protein. (Os05t0386000-03);Conserved hypothetical protein. (Os05t0386000-04)
Sequence	GCGGCGGCCATACCGCAACAAGTTCTCCTCCGCCGTCGCTTCCACGGCCTCCCCCCATCC CAAACGCGGTCGATCGCCGGCGAATCCCCACCGGACGCCGAGGCGACTGCCCCGCCGCTC GCCACCCTCCATCCCCGGCGTCCCCGAAGTAACCCACCGCCTCCTTCTTCTTCCCTCCAT CTCTCCTGCACCCGAGTGAGGGCGACCGCGATCTCTCAGATCCACCGAATCCGGAGACCC CGCTCGCGATCGAGTCAAACGCCTCCGAACCCTTAATCCTCGCCGCCGCCGCCGCCGCCG ACGACGACGACGAGGACCTCCCCACTAGGATGAGCGGGAGGAAGAATGCCGGCAAGGCCT CGCCGTTTCTGCTCCTCCTCATCTCGGTGGGCTGCTTCTTCGCGACCTACAACTTCCTGA CGATGGTGGGCCACGGCCGGAGCCGGGACGCCGGGCCGCGGAAGATTCTCGGCGGCGTCG GCGGCGTCGGCGGCGGCGGCTCGGACCCGTCGAAGAGGTTCCACGTCGCGCTCACGGCGA CGGACGCGCTCTACAGCCAGTGGCAGTCGCGGGTGATGTACTACTGGTACAGGGAGATGA GGGATCGGCCTGGCTCCGACATGGGCGGCTTCACGCGGATCCTGCACTCCGGGAAGCCCG ACGGATTGATGGATGAGATACCTACCTTGGTGGTTGATCCCCTCCCCGAAGGCGCGGATC GAGGTTACATTGTCCTAAACAGGCCTTGGGCATTTGTTCAATGGCTGAAGAAATCAAACA TCAAAGAAGACTATGTACTTATGGCTGAGCCAGATCACATCTTTGTGAGGCCATTGCCAA ACTTAGCTCATGGCGACGAACCTGCTGCGTTTCCCTTCTTCTACATCAAACCAACTGAAA ATGAAATAATACTGAGGAAGTTCTTTCCTGAAGAAAATGGACCAGTCTCAAAAATTGATC CTATTGGTAATTCCCCAGTGATTATCAAGAAGGCCCAGCTTGAGAAGATTGCTCCAACTT GGATGAATATTTCGTTGAAAATGAAAGAGGATGTGGAGACAGACAAAGCTTTTGGATGGG TCTTGGAAATGTATGCATATGCTGTCGCTAGTGCATTGCATGGTGTGCACTACAGCCTTC GTAAGGATTTTATGATTCAGCCTCCTTGGGACGCGAAATCGGACAACACATTCATCATCC ATTACACTTATGGGTGTGATTATACATTAAAGGGTGAGCTAACTTATGGGAAAATAGGGG AATGGCGGTTTGACAAAAGATCTTATCTTCGTTCACCACCGCCAAGAAATCTTACATTAC CTCCTCCAGGAGTTCCCGAAAGTGTGGCCACCCTTGTGAAAATGGTCAATGAAGCCACTG CAAACATTCCAGGGTGGGACGAAGAAAGGTGATTAAATGGTTTTGCCTCGCTGATACTCA ATTCAGCTGATAGTGTTTACATTAGAAGCCATCGAAGGATCTCCGTGGTCAATAAAACAA GTGAATCAACGCATGTTCTTCTTAGGCGGCAGACACGATTGGCTAATTCCTACAAATTAA CCTAGAATTAGTTTTTGGCAAGTAAAACACGGTAGTTATTTGGTCAAGTGAGGTGGTCCA TTTTTGGTGTTGTAAAGCTGAAACGTGAGCTTTTGGTAATACTCCTAGATCATTCGATTG TATTGTAAAGCAGAAATATTAGTCAAGTTTGTTGCACGGGAATGTTACTCGATAATTGAG GCTTGGGATCCTTCGCGCTTGTGCCATTACATGAAATCTTTCAAAAAGTAGTGTTTGTCA TGAGAGGATTGAGAGAGATGGTTTGAGAGGGAAGCATGGAATTCACATGACGATCAGGTG TTCCTAGTTAAGTTGCATACTTACAGTCC