Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0384800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:18586998:18595443:-1 gene:Os05g0384800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chromosome condensation regulator protein (Fragment). (Os05t0384800-01)
Sequence	ATGTCGGACGCGTCGTCGGATCTCGGCGGCGCGCGGCCCGGGGCCGTGGAGCGCGACATC GAGCAGGCCATCACTGCTCTCAAGAAAGGAGCATACTTGCTGAAGTACGGGCGCAGAGGG AAGCCAAAATTTTGCCCATTTAGGCTTTCCAATGATGAATCTATATTGATATGGTTTTCC GGGAAAGAGGAAAAACAGCTGAGGTTGAGTCATGTGTCCAGAATAATTCCTGGACAACGA ACGGCAATTTTTCAGAGGTATCCACGACCAGAAAAGGAATGCCAGTCATTTTCTCTCATA TCTCATGATAGATCATTGGACATTATATGCAAGGATAAAGATGAAGCCGAAGTGTGGTTT GCTGGGCTAAAAACCCTCATAACACGTAGTCATCAAAGGAAATGGAGAACAGAATCGAGA AGTGATATGCTTTCCTCTGGTACAACTAGTCCCAGAACTTACACAAGACGAAGCTCCCCA TTGAGTTCTCCTTTCAGCAGCAATGACAGTGTCCACAAGGATGGTGTTGAAAATTACCGA CTTCGTAGTCCATTTGGGAGCCCACCAAAGGTCGGTCTGGAGAAGGCATTTTCTGACATT GTGTCATATGCAGCCCCACCCAAGCCCTTCTTCCCATCGGATTCTAATGCCGGTTCTGTC CATTCCGTGTCTTCTGGGCAGTCAGATAACACAAATTTACACTCAAGGGGCATCCCAATG GATGCTTTCCGTGTTAGTTTATCCAGTGCTGTTAGTTCATCAAGTCATGGTTCTGGTCAT GATGATGGTGATGCCCTAGGTGATGTTTTCATATGGGGAGAGGGGACTGGGGAGGGGATT CTTGGTGGTGGCAATTCGAGAGTTGGGAACTCCTCAGGTGTAAACATGGATTGTCTTATA CCAAAGCCATTGGAATTTGCTGTAAAACTTGATGTACAGAACATTTCTTGTGGGGGAAGG CATGCCACACTTGTTACCAAGCAGGGAGAGATCTACTCTTGGGGTGAGGAATCAGGCGGA CGTCTTGGTCATGGTGTAGATTGTGATGTGCCCCAGCCAAAGCTTATTGATGCTCTTGCT AATATGAACATTGAGCTAGTAGCATGTGGTGAGTACCACACTTGTGCAGTTACGCTCTCT GGGGATCTGTACACTTGGGGAAATGGTACTTCCAATTCTGGGCTTTTAGGCCACGGGAAT GAAGTCAGTCACTGGGTACCCAAAAGGGTCAATGGACCATTAGAGGGCATACATGTTTCA GCAATTTCATGTGGCCCCTGGCACACGGCTATAGTAACTTCTGCAGGACAGCTATTCACA TTTGGAGATGGATCTTTTGGAGTTCTAGGTCATGGAGATCGACAGAGTCTTTCAGTCCCT AGAGAAGTGGAATCCCTTAAAGGGCTACGGACTGTTCGAGCAGCTTGTGGTGTTTGGCAC ACTGCTGCTGTTGTTGAAGTTATGGTCGGCAATTCTAGTTCTAGCAACTGTTCTTCTGGT AAGATTTTTACATGGGGTGATGGTGATAAAGGCCGTTTAGGACATGGTGACAAAGATACA AGACTTGTCCCAACATGTGTAGCTGCTTTGGTCGAGCCTAACTTTTGTCAAATAGCTTGT GGTCACTGTATGACGGTGGCGCTGACTACCTCTGGGCATGTATATACAATGGGAAGTCCT GTCTATGGCCAGCTTGGAAATCCACAAGCAGATGGCATGCTTCCTGTGCGTGTTGAAGGG AAGCTACATAAAAACTTTGTGGAGGAGATCTCATGTGGTGCTTATCATGTCGCTGTCTTG ACTTCAAGGACTGAGGTGTACACATGGGGTAAAGGTGCGAATGGTCGGTTAGGACATGGA GATACGGACGATAGGAGTTCTCCTACTTTGGTTGAAGCTCTGAAAGATAAGCAAGTCAGA ACTGTTGTTTGCGGGATTAACTTCACTGCAGCAATATGCATTCACAAGTGGGTTTCTGGA GTTGATCAGTCCATGTGTTCTGGGTGTCGGTTGCCATTTAATCTAAGGAGAAAACGTCAT AATTGCTACAATTGTGCACTTGTATTTTGTCATGCCTGCAGCAGTAAGAAATCTCTGAAA GCTTCATTAGCACCAAACCCAAACAAGCCTTATCGCGTATGTGATAGCTGCTACAGCAAG CTGAATAAGGGTCCTGAGACAGATAGATATTCTTCAGCAAAGCGGGGATCTGTTATACAG GGGTTCAATGATTCTGTTGACGAGGAGTTGGAGACAAAATCAAATGCCCAGTTGTCGAGA TTGTCATCATTGGAATCCTTCAAGCACATGGATAGCAGAACTTCGAAGAAAAACAAGAAG TTTGAGTTCAATAGCAGTCGTGTTTCCCCTATTCCAAATGGCAGTTCTCATTGGAGTGGG CTCAACATCTCAAAATCCTTTGGTTCATCAAAGAAATTTTTTTCAGCATCAGTTCCTGGA TCTAGAATTGTTTCAAGGGCAACATCACCTGTTTCAAGAAGAGCAAGCCCTCCTCGATCC ACAACTCCAACACCTACTTTGGGTGGTCTAACCTCTCCTAGAGTGGTGGATGGTGTGAAG CCAAATGATAGCATAAGCCAAGAGGTTCTAAGTTTGAGGTCTCAGGTGGAAAATCTTACT CGCAAGTCTCAGCTACTGGAAGCTGATTTGGAGAGAACAACTAAACAGTTGAAGGAAGCT ATTTCAATTGCAGGGGAGGAAACTGCGAAGTGCAAAGCTGCAAAGGAAGTTATCAAATCA TTAACTGCACAGTTGAAGGGCATGGCAGAGAAGCTACCTGAAGGAGCAGGACTGGTGAAG AACAGCAGACTGCCACCGCTGCCAGGAATTTCTATTCCAACTGATATATCAGTTGCATCT GAGAGTTTGGGTAGCCCAAGAAGTTCTGGAGAACCCTGTTCAAACGGTTCTAATGGTTTG CTTGTTTCCAATGGACCAACTTCAGTTAGAAATAAGTTGAGTCACCCTGAAATTCCCAAG AATGGAACAAGGCTACCCGATTCAGATTCTAAGCATGAATCTGAATGGGTAGAGCAAGAT GAACCAGGGGTGTATATCACTCTTACTGCCCTACCTGGAGGGACTCGAGATCTCAAGAGG GTCCGGTTCAGCCGGAAGCGTTTCAGCGAGACACAAGCAGAACAATGGTGGCAAGAGAAT CGGGCACGGGTATACGAGCAGTATAATGTTCGAGTAGTCGACAAATCGGTTGGCAGTATT GATAATGATGTACATCATTGA

Peptide Sequence

PEP ID	Os05t0384800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:18586998:18595443:-1 gene:Os05g0384800 transcript:Os05t0384800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chromosome condensation regulator protein (Fragment). (Os05t0384800-01)
Sequence	MSDASSDLGGARPGAVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFS GKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWF AGLKTLITRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYR LRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPM DAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLI PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVS AISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWH TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIAC GHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVL TSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSG VDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSK LNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSKKNKK FEFNSSRVSPIPNGSSHWSGLNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRASPPRS TTPTPTLGGLTSPRVVDGVKPNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEA ISIAGEETAKCKAAKEVIKSLTAQLKGMAEKLPEGAGLVKNSRLPPLPGISIPTDISVAS ESLGSPRSSGEPCSNGSNGLLVSNGPTSVRNKLSHPEIPKNGTRLPDSDSKHESEWVEQD EPGVYITLTALPGGTRDLKRVRFSRKRFSETQAEQWWQENRARVYEQYNVRVVDKSVGSI DNDVHH

Transcript Sequence

Transcript ID	Os05t0384800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18586998:18595443:-1 gene:Os05g0384800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chromosome condensation regulator protein (Fragment). (Os05t0384800-01)
Sequence	ACCTCGCACCATTCCTCTCTCTCTCTCTCTCTCCCCCCTCGCCCTCGAGCCCTCGATCTC CACATCTCTCTCGCGCGCGCTCTGGTGGTCTCTCCACCCCCCCCCCCCCACGCAGCGCAA ACCCCCCCGATTCCCCCCCTCGCTTCGGCCACCAGCGGCCGCCCAGCCCGTCGCGCGCTT CCGCCGCGCCGCCGCGGAGATTTTTTTTTGTGCGCGCGCGCGCTCTCCCCGAGGGGGGGC GGGAACGGGGTCCCGTGCCATTGGGAGGGGGATGCCGGGATGTGGCGGGCGGTGGGTCCA GGGAGGAGGAGGAGAAGGGCGGTGGTGAGGCGGTGAGGCGGCGGCGGCGGCACGCGCGCG GCCAGAGGAGGCGGGGGGGGGGGGGGGGCGGCGATGTCGGACGCGTCGTCGGATCTCGGC GGCGCGCGGCCCGGGGCCGTGGAGCGCGACATCGAGCAGGCCATCACTGCTCTCAAGAAA GGAGCATACTTGCTGAAGTACGGGCGCAGAGGGAAGCCAAAATTTTGCCCATTTAGGCTT TCCAATGATGAATCTATATTGATATGGTTTTCCGGGAAAGAGGAAAAACAGCTGAGGTTG AGTCATGTGTCCAGAATAATTCCTGGACAACGAACGGCAATTTTTCAGAGGTATCCACGA CCAGAAAAGGAATGCCAGTCATTTTCTCTCATATCTCATGATAGATCATTGGACATTATA TGCAAGGATAAAGATGAAGCCGAAGTGTGGTTTGCTGGGCTAAAAACCCTCATAACACGT AGTCATCAAAGGAAATGGAGAACAGAATCGAGAAGTGATATGCTTTCCTCTGGTACAACT AGTCCCAGAACTTACACAAGACGAAGCTCCCCATTGAGTTCTCCTTTCAGCAGCAATGAC AGTGTCCACAAGGATGGTGTTGAAAATTACCGACTTCGTAGTCCATTTGGGAGCCCACCA AAGGTCGGTCTGGAGAAGGCATTTTCTGACATTGTGTCATATGCAGCCCCACCCAAGCCC TTCTTCCCATCGGATTCTAATGCCGGTTCTGTCCATTCCGTGTCTTCTGGGCAGTCAGAT AACACAAATTTACACTCAAGGGGCATCCCAATGGATGCTTTCCGTGTTAGTTTATCCAGT GCTGTTAGTTCATCAAGTCATGGTTCTGGTCATGATGATGGTGATGCCCTAGGTGATGTT TTCATATGGGGAGAGGGGACTGGGGAGGGGATTCTTGGTGGTGGCAATTCGAGAGTTGGG AACTCCTCAGGTGTAAACATGGATTGTCTTATACCAAAGCCATTGGAATTTGCTGTAAAA CTTGATGTACAGAACATTTCTTGTGGGGGAAGGCATGCCACACTTGTTACCAAGCAGGGA GAGATCTACTCTTGGGGTGAGGAATCAGGCGGACGTCTTGGTCATGGTGTAGATTGTGAT GTGCCCCAGCCAAAGCTTATTGATGCTCTTGCTAATATGAACATTGAGCTAGTAGCATGT GGTGAGTACCACACTTGTGCAGTTACGCTCTCTGGGGATCTGTACACTTGGGGAAATGGT ACTTCCAATTCTGGGCTTTTAGGCCACGGGAATGAAGTCAGTCACTGGGTACCCAAAAGG GTCAATGGACCATTAGAGGGCATACATGTTTCAGCAATTTCATGTGGCCCCTGGCACACG GCTATAGTAACTTCTGCAGGACAGCTATTCACATTTGGAGATGGATCTTTTGGAGTTCTA GGTCATGGAGATCGACAGAGTCTTTCAGTCCCTAGAGAAGTGGAATCCCTTAAAGGGCTA CGGACTGTTCGAGCAGCTTGTGGTGTTTGGCACACTGCTGCTGTTGTTGAAGTTATGGTC GGCAATTCTAGTTCTAGCAACTGTTCTTCTGGTAAGATTTTTACATGGGGTGATGGTGAT AAAGGCCGTTTAGGACATGGTGACAAAGATACAAGACTTGTCCCAACATGTGTAGCTGCT TTGGTCGAGCCTAACTTTTGTCAAATAGCTTGTGGTCACTGTATGACGGTGGCGCTGACT ACCTCTGGGCATGTATATACAATGGGAAGTCCTGTCTATGGCCAGCTTGGAAATCCACAA GCAGATGGCATGCTTCCTGTGCGTGTTGAAGGGAAGCTACATAAAAACTTTGTGGAGGAG ATCTCATGTGGTGCTTATCATGTCGCTGTCTTGACTTCAAGGACTGAGGTGTACACATGG GGTAAAGGTGCGAATGGTCGGTTAGGACATGGAGATACGGACGATAGGAGTTCTCCTACT TTGGTTGAAGCTCTGAAAGATAAGCAAGTCAGAACTGTTGTTTGCGGGATTAACTTCACT GCAGCAATATGCATTCACAAGTGGGTTTCTGGAGTTGATCAGTCCATGTGTTCTGGGTGT CGGTTGCCATTTAATCTAAGGAGAAAACGTCATAATTGCTACAATTGTGCACTTGTATTT TGTCATGCCTGCAGCAGTAAGAAATCTCTGAAAGCTTCATTAGCACCAAACCCAAACAAG CCTTATCGCGTATGTGATAGCTGCTACAGCAAGCTGAATAAGGGTCCTGAGACAGATAGA TATTCTTCAGCAAAGCGGGGATCTGTTATACAGGGGTTCAATGATTCTGTTGACGAGGAG TTGGAGACAAAATCAAATGCCCAGTTGTCGAGATTGTCATCATTGGAATCCTTCAAGCAC ATGGATAGCAGAACTTCGAAGAAAAACAAGAAGTTTGAGTTCAATAGCAGTCGTGTTTCC CCTATTCCAAATGGCAGTTCTCATTGGAGTGGGCTCAACATCTCAAAATCCTTTGGTTCA TCAAAGAAATTTTTTTCAGCATCAGTTCCTGGATCTAGAATTGTTTCAAGGGCAACATCA CCTGTTTCAAGAAGAGCAAGCCCTCCTCGATCCACAACTCCAACACCTACTTTGGGTGGT CTAACCTCTCCTAGAGTGGTGGATGGTGTGAAGCCAAATGATAGCATAAGCCAAGAGGTT CTAAGTTTGAGGTCTCAGGTGGAAAATCTTACTCGCAAGTCTCAGCTACTGGAAGCTGAT TTGGAGAGAACAACTAAACAGTTGAAGGAAGCTATTTCAATTGCAGGGGAGGAAACTGCG AAGTGCAAAGCTGCAAAGGAAGTTATCAAATCATTAACTGCACAGTTGAAGGGCATGGCA GAGAAGCTACCTGAAGGAGCAGGACTGGTGAAGAACAGCAGACTGCCACCGCTGCCAGGA ATTTCTATTCCAACTGATATATCAGTTGCATCTGAGAGTTTGGGTAGCCCAAGAAGTTCT GGAGAACCCTGTTCAAACGGTTCTAATGGTTTGCTTGTTTCCAATGGACCAACTTCAGTT AGAAATAAGTTGAGTCACCCTGAAATTCCCAAGAATGGAACAAGGCTACCCGATTCAGAT TCTAAGCATGAATCTGAATGGGTAGAGCAAGATGAACCAGGGGTGTATATCACTCTTACT GCCCTACCTGGAGGGACTCGAGATCTCAAGAGGGTCCGGTTCAGCCGGAAGCGTTTCAGC GAGACACAAGCAGAACAATGGTGGCAAGAGAATCGGGCACGGGTATACGAGCAGTATAAT GTTCGAGTAGTCGACAAATCGGTTGGCAGTATTGATAATGATGTACATCATTGACATAAG AAATTTGACTTGGTCAGTCACTACAAAGCTCTCAAAGCTCTCACCGTTGAGCATGGGTGC TGACGCGGCTATGATATTTTGGTTAGGCCCAGAAGAGGAGGGGCCTGCTGTTTGAAAAAT GTGGGCTTGCATTCTTTTTACACGATTCTTTCCTCTTCCATTTCCCTTGTGTGGAATGTA GAGTGTTCAAGCAGAAGTTATGTAAATGGTTAGTGGCAGCTGGCTAATCTGTCCTGTAAA TGCATAAGCAAGTGCATCAATTTTAGACTATGATCTTCCTGATTTTCCTTTAATTGGCAA ATATAGGTGCAAAATCTAAGTGATGATGATGAAGAATATTTGGTGCTAATTGTAGATTGA GATGCAAAGTAGCTTTGAAAGATTTAAGCTTTGTTCTGGCTGACTTGAGTGCCTGTTTTG GCGAAAATTTCATGCCAATTACTCTGCTCCCCCAGATTGAACGTC