Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0382500-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:18487329:18489221:1 gene:Os05g0382500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 CYP94E4. (Os05t0382500-01)
Sequence

ATGGAGACCGCGCATCTAGCCTACGTGCTCCTCTTCCTCGTCACCGCCGTCCTCCTCTTC
CATCTCCGGCGAGGCGGCCGGTCAGCTCCGGCGAAGCTCACGACGGCGCACCGCCCGCAC
CCGAACCCCGTCCTGGGCAACACCGTCGAGTTCATCCGCAACCGGCGCCGCTTCTTCGAC
TGGTACACCGACCTGCTGCGCGCGTCGCCGTCGGGCGCCATCGAGGCGTGGGGCCCGTTC
GGCGCCGGCCACGCGGTGACCACGGCGTGCCCGGCCGCCGTCGAACACCTCCTGCGCGGC
AACTTCGGCAACTATGTCAGGGGGGCGAGCTTCCGCGCCGCGATGTCCGAGCTCATCGGC
GACGGCCTCTTCGCCGCCGACGGGCGCCTCTGGAGCGTCCAGAGGAAAGTGGCGTCCTAC
GCCTTCTCCTCCCGCGCGCTCCGCCGCTTCTCCGACGACGTCCTCGCCGTGCACCTCCGC
GGAGGGCTCCTCCCGTTCCTGGACGCCGCCGCGGCGTCCGGGGAGGCCGTCGACCTGCAG
GACGCGCTCCGCCGGTTCGCCTTCGACAGCATCTGCCACGTCGCGTTCGGCGTCGAGAGC
TCGACGCTGCTCGAGACGGCGAGGGAGGACTCCGGCCGCCACGAGGCCCTCTTCGCGGCG
TTCGACGCCGCCGTCGAGATCTCCTTCCGGAGGGCGCTGGCGCCGTTCACCCTCGTGCGG
AAGCTCACGGGCCTCGTCAACGTCGGCAGCTCGCGCCGGCTCCGCGAAGCCATCGGTGTC
ATCGACGACTACGCCATGTCCGTCGTCGAATCCAAGGAGGCGGCGTGTCGCGATCGCGAT
AGCGAGGACGTGGACCCGGACCTGCTGTCGCGGTTCATGGCGGCCATGGACGAGGAGGAC
GGCGGCGAGCTGGGCGCCATGTTCCCCACGCCGGAGGGGAAGCGCCGGCTCCTGCGCGAC
GTGGTCGTGAGCTTCGTGCTGGCCGGCAAGGACACGACGTCGTCCGCCCTGACGTGGCTC
TTCTGGCTCCTCGCCGCGAACCCGCGGTGCGAGAGGCGCGTCCGCGACGAGGTGTCGCGG
TCGCCCGACGGCGACGGCGGCGGCGACGCGAAGGGGATGCACACGCACTACCTCCACGCT
GCGATCACGGAGGCGATGCGGCTGTACCCGCCGGTGCCGTTCAACGGGAGGGTGGCGGTC
GGCGACGACGTGCTCCCGGGCGGCGCGGCGGTGCGCGCCGGGTGGTTCGCCAACTACTCC
GCGTACGCGATGGGGCGGATGGAGAGGCTGTGGGGCGAGGGCTGCCTCGAGTTCTCGCCG
GAGCGATGGCTCCGCGACGGCGGCGAGTTCGTGGCCGTGGACGCGGCGCGGTACCCGGTG
TTCCACGCCGGGCCGAGGGCGTGCCTCGGGAAGGAGATGGCGTACGTGCAGATGAAGACG
GTGGCGGCAGCCGTGCTGCGGAGGTTCAGCGTCGAGGTGGCGGCGCCGGCTCCGGCCATG
GAATCGCCGCCGGCGTACGAGATGACGGCGACGATGAAGATGAAGGGCGGGCTGTGGGTG
CGGCTAAGGAAGCGGGAATAG

Peptide Sequence

PEP ID

Os05t0382500-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:18487329:18489221:1 gene:Os05g0382500 transcript:Os05t0382500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 CYP94E4. (Os05t0382500-01)
Sequence

METAHLAYVLLFLVTAVLLFHLRRGGRSAPAKLTTAHRPHPNPVLGNTVEFIRNRRRFFD
WYTDLLRASPSGAIEAWGPFGAGHAVTTACPAAVEHLLRGNFGNYVRGASFRAAMSELIG
DGLFAADGRLWSVQRKVASYAFSSRALRRFSDDVLAVHLRGGLLPFLDAAAASGEAVDLQ
DALRRFAFDSICHVAFGVESSTLLETAREDSGRHEALFAAFDAAVEISFRRALAPFTLVR
KLTGLVNVGSSRRLREAIGVIDDYAMSVVESKEAACRDRDSEDVDPDLLSRFMAAMDEED
GGELGAMFPTPEGKRRLLRDVVVSFVLAGKDTTSSALTWLFWLLAANPRCERRVRDEVSR
SPDGDGGGDAKGMHTHYLHAAITEAMRLYPPVPFNGRVAVGDDVLPGGAAVRAGWFANYS
AYAMGRMERLWGEGCLEFSPERWLRDGGEFVAVDAARYPVFHAGPRACLGKEMAYVQMKT
VAAAVLRRFSVEVAAPAPAMESPPAYEMTATMKMKGGLWVRLRKRE

Transcript Sequence

Transcript ID

Os05t0382500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:18487329:18489221:1 gene:Os05g0382500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 CYP94E4. (Os05t0382500-01)
Sequence

AATCTGAATTTCCGGGAAAATTGAGAAACCATGGAGACCGCGCATCTAGCCTACGTGCTC
CTCTTCCTCGTCACCGCCGTCCTCCTCTTCCATCTCCGGCGAGGCGGCCGGTCAGCTCCG
GCGAAGCTCACGACGGCGCACCGCCCGCACCCGAACCCCGTCCTGGGCAACACCGTCGAG
TTCATCCGCAACCGGCGCCGCTTCTTCGACTGGTACACCGACCTGCTGCGCGCGTCGCCG
TCGGGCGCCATCGAGGCGTGGGGCCCGTTCGGCGCCGGCCACGCGGTGACCACGGCGTGC
CCGGCCGCCGTCGAACACCTCCTGCGCGGCAACTTCGGCAACTATGTCAGGGGGGCGAGC
TTCCGCGCCGCGATGTCCGAGCTCATCGGCGACGGCCTCTTCGCCGCCGACGGGCGCCTC
TGGAGCGTCCAGAGGAAAGTGGCGTCCTACGCCTTCTCCTCCCGCGCGCTCCGCCGCTTC
TCCGACGACGTCCTCGCCGTGCACCTCCGCGGAGGGCTCCTCCCGTTCCTGGACGCCGCC
GCGGCGTCCGGGGAGGCCGTCGACCTGCAGGACGCGCTCCGCCGGTTCGCCTTCGACAGC
ATCTGCCACGTCGCGTTCGGCGTCGAGAGCTCGACGCTGCTCGAGACGGCGAGGGAGGAC
TCCGGCCGCCACGAGGCCCTCTTCGCGGCGTTCGACGCCGCCGTCGAGATCTCCTTCCGG
AGGGCGCTGGCGCCGTTCACCCTCGTGCGGAAGCTCACGGGCCTCGTCAACGTCGGCAGC
TCGCGCCGGCTCCGCGAAGCCATCGGTGTCATCGACGACTACGCCATGTCCGTCGTCGAA
TCCAAGGAGGCGGCGTGTCGCGATCGCGATAGCGAGGACGTGGACCCGGACCTGCTGTCG
CGGTTCATGGCGGCCATGGACGAGGAGGACGGCGGCGAGCTGGGCGCCATGTTCCCCACG
CCGGAGGGGAAGCGCCGGCTCCTGCGCGACGTGGTCGTGAGCTTCGTGCTGGCCGGCAAG
GACACGACGTCGTCCGCCCTGACGTGGCTCTTCTGGCTCCTCGCCGCGAACCCGCGGTGC
GAGAGGCGCGTCCGCGACGAGGTGTCGCGGTCGCCCGACGGCGACGGCGGCGGCGACGCG
AAGGGGATGCACACGCACTACCTCCACGCTGCGATCACGGAGGCGATGCGGCTGTACCCG
CCGGTGCCGTTCAACGGGAGGGTGGCGGTCGGCGACGACGTGCTCCCGGGCGGCGCGGCG
GTGCGCGCCGGGTGGTTCGCCAACTACTCCGCGTACGCGATGGGGCGGATGGAGAGGCTG
TGGGGCGAGGGCTGCCTCGAGTTCTCGCCGGAGCGATGGCTCCGCGACGGCGGCGAGTTC
GTGGCCGTGGACGCGGCGCGGTACCCGGTGTTCCACGCCGGGCCGAGGGCGTGCCTCGGG
AAGGAGATGGCGTACGTGCAGATGAAGACGGTGGCGGCAGCCGTGCTGCGGAGGTTCAGC
GTCGAGGTGGCGGCGCCGGCTCCGGCCATGGAATCGCCGCCGGCGTACGAGATGACGGCG
ACGATGAAGATGAAGGGCGGGCTGTGGGTGCGGCTAAGGAAGCGGGAATAGTCAGTGTGA
GTGATTTGATGCCACTTGTTGTTCTTGTTTGACTAAGTGAACTCTTGCATCAGGTGTTGA
CGGGAAACCGTTTTAAACACTCGTTGGACATTCACCCGTTTCTTACATGTCATCTAAATA
ATTATGGAAAATTTTTAAAAAAATTGACATGATAGGTTAATATGTAATATATTACTTCAC
AAATATACAAGTTCAAATTCGTCTTCTATGAATTGTAACAAAAATAACAATTTTGACTGT
GAATATACGTATACTAATTAGAGTTTAATTTCT