Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0382200-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:18475523:18479481:-1 gene:Os05g0382200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sodium transporter description:Similar to Cation/H+ exchanger (Fragment). (Os05t0382200-00)
Sequence	ATGGCGGCGGCGGCGGTCACCGTGAAGATGGCGTCGGACGGGATGTGGCAGGGGGAGAAC CCGCTGGACTTCGCGCTGCCGCTGCTGGCGCTGCAGGTGGCCGTCATCCTGGTGATCACG CAGGGCCTCGCGCTCGCGCTTAAGCCCCTGCGCCAGCCTAGGGTGGTCGCCGAGATCCTG GGTGGCATCTTGCTGGGGCCGTCGGCTCTCGGCCGGTGGGGCCCCTTCCGCCGCACCCTC TTCCCGGCGTGGAGCGCCGCCGCGCTGGACACCGTCTCCGGCCTCGGCCTGCTGCTCTTC CTCTTCCTGGTCGGCCTCGAGCTCGACTTCCGCTCCGTGCGCCGCGTCGGGCCGCGCAGC GTGGCCATCGCCGCGGCGGGCATCGCGCCCCCGTTCCTCGCCGCCGCGGGCCTCGTGCCG CTCCTCGACGTCGCCGTCCCGGCGCCGCGCCGCGCGTCCTTCCTCCCGCTCTGCGTGTTC GTCGGCGCCGCGCTCTCGGTGACCGCGCTCCCCGTGCTCGCCTGCATCCTCAAGGAGCTC AGCCTCCTCGGCGTGCCCTTCGGCGACACCGCCATGGCGGCCGCCGCCGTAAACGACGTC TTCGCTTGGGTCCTCCTCGCCCTCGCGCTCGCCGTCTCCGGCGGCGGAGGCGGCGAGCCG AAGGGGCCCCCTCTCGCGCCGGTGTACATCCTCGCGTCGGGTGCCGCCTTCGTGGCGTTC ATGCTCGGCGCGCTCCGCCCGCTCATGGCGCGCCTGGCGCGCCGCCTTGGCCCCGACCGC GCGGGCGACCTGGCGTGCACCGGCGCCGTGGCGTGCGTGCTCCTCGCCGGCGCCGCCACC GACGCCATCGGCGTGCACCCGGTGTTCGGCGCGTTCGTGTTCGGGCTGGCCATGCCGCGG GAGGGCGGCCTCGCGGAGCGCGCGGGCGAGAAGGTGGCACCGCTGGTGTCCGGGCTGATG CTGCCGCTCTACTTCGCCACGAGCGGCCTGCACACGGACATCGACAACGTCCGTGGCGCG GCCGCGTGGGGCATGGTCGCGCTCGTCGTGGCCGTGGCCATCGGCGGGAAGTTCGCCGGG ACGTTCGCGGTGGCCGCCGGCACCGGCATGCCCAGGCGCGAGGCCGCCGCCCTCGGCGTG GCCATGAGCGCCAAGGGGCTCGTCGAGCTCATCGTGCTCAACATCGGCAAGGAGAGGAAG GTGCTGGACGACACGACGTTTGCCATCTTCGTGATCATGGCGCTAACGACGACGGTGCTC GCGACGCCGTTCATGACGGCGCTCTACCGGCGCACGCCGACGGCGACCACGCCGGAGAGC GATGACGTGGAGCTCAATGGTGGCGACGCTTGTCCGGCTTAG

Peptide Sequence

PEP ID	Os05t0382200-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:18475523:18479481:-1 gene:Os05g0382200 transcript:Os05t0382200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sodium transporter description:Similar to Cation/H+ exchanger (Fragment). (Os05t0382200-00)
Sequence	MAAAAVTVKMASDGMWQGENPLDFALPLLALQVAVILVITQGLALALKPLRQPRVVAEIL GGILLGPSALGRWGPFRRTLFPAWSAAALDTVSGLGLLLFLFLVGLELDFRSVRRVGPRS VAIAAAGIAPPFLAAAGLVPLLDVAVPAPRRASFLPLCVFVGAALSVTALPVLACILKEL SLLGVPFGDTAMAAAAVNDVFAWVLLALALAVSGGGGGEPKGPPLAPVYILASGAAFVAF MLGALRPLMARLARRLGPDRAGDLACTGAVACVLLAGAATDAIGVHPVFGAFVFGLAMPR EGGLAERAGEKVAPLVSGLMLPLYFATSGLHTDIDNVRGAAAWGMVALVVAVAIGGKFAG TFAVAAGTGMPRREAAALGVAMSAKGLVELIVLNIGKERKVLDDTTFAIFVIMALTTTVL ATPFMTALYRRTPTATTPESDDVELNGGDACPA

Transcript Sequence

Transcript ID	Os05t0382200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18475523:18479481:-1 gene:Os05g0382200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sodium transporter description:Similar to Cation/H+ exchanger (Fragment). (Os05t0382200-00)
Sequence	CATGGCGGCGGCGGCGGTCACCGTGAAGATGGCGTCGGACGGGATGTGGCAGGGGGAGAA CCCGCTGGACTTCGCGCTGCCGCTGCTGGCGCTGCAGGTGGCCGTCATCCTGGTGATCAC GCAGGGCCTCGCGCTCGCGCTTAAGCCCCTGCGCCAGCCTAGGGTGGTCGCCGAGATCCT GGGTGGCATCTTGCTGGGGCCGTCGGCTCTCGGCCGGTGGGGCCCCTTCCGCCGCACCCT CTTCCCGGCGTGGAGCGCCGCCGCGCTGGACACCGTCTCCGGCCTCGGCCTGCTGCTCTT CCTCTTCCTGGTCGGCCTCGAGCTCGACTTCCGCTCCGTGCGCCGCGTCGGGCCGCGCAG CGTGGCCATCGCCGCGGCGGGCATCGCGCCCCCGTTCCTCGCCGCCGCGGGCCTCGTGCC GCTCCTCGACGTCGCCGTCCCGGCGCCGCGCCGCGCGTCCTTCCTCCCGCTCTGCGTGTT CGTCGGCGCCGCGCTCTCGGTGACCGCGCTCCCCGTGCTCGCCTGCATCCTCAAGGAGCT CAGCCTCCTCGGCGTGCCCTTCGGCGACACCGCCATGGCGGCCGCCGCCGTAAACGACGT CTTCGCTTGGGTCCTCCTCGCCCTCGCGCTCGCCGTCTCCGGCGGCGGAGGCGGCGAGCC GAAGGGGCCCCCTCTCGCGCCGGTGTACATCCTCGCGTCGGGTGCCGCCTTCGTGGCGTT CATGCTCGGCGCGCTCCGCCCGCTCATGGCGCGCCTGGCGCGCCGCCTTGGCCCCGACCG CGCGGGCGACCTGGCGTGCACCGGCGCCGTGGCGTGCGTGCTCCTCGCCGGCGCCGCCAC CGACGCCATCGGCGTGCACCCGGTGTTCGGCGCGTTCGTGTTCGGGCTGGCCATGCCGCG GGAGGGCGGCCTCGCGGAGCGCGCGGGCGAGAAGGTGGCACCGCTGGTGTCCGGGCTGAT GCTGCCGCTCTACTTCGCCACGAGCGGCCTGCACACGGACATCGACAACGTCCGTGGCGC GGCCGCGTGGGGCATGGTCGCGCTCGTCGTGGCCGTGGCCATCGGCGGGAAGTTCGCCGG GACGTTCGCGGTGGCCGCCGGCACCGGCATGCCCAGGCGCGAGGCCGCCGCCCTCGGCGT GGCCATGAGCGCCAAGGGGCTCGTCGAGCTCATCGTGCTCAACATCGGCAAGGAGAGGAA GGTGCTGGACGACACGACGTTTGCCATCTTCGTGATCATGGCGCTAACGACGACGGTGCT CGCGACGCCGTTCATGACGGCGCTCTACCGGCGCACGCCGACGGCGACCACGCCGGAGAG CGATGACGTGGAGCTCAATGGTGGCGACGCTTGTCCGGCTTAG