Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0380300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:18377097:18382814:1 gene:Os05g0380300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog A1.1-4 description:Similar to NBS-LRR protein (Fragment). (Os05t0380300-01)
Sequence	ATGGCAGAGTTACTCTCAGCTCTTCTGCCTGCCCTCCTCAAGAAAGCTGGTGAGTCTATC TCAACGGAGTTTGCCTTCATTGGGGGTATTGAGCGCAAGTGTTCGGAGCTGAAAACCTCG CTGCTCGCTATCAACCAAGTGATCTATGATGCCGAGGAGCAGGCGTCCAAGAAGCCTGCT GTGAAGTCCTGGATCGCCAAGCTGAAGATGGCTGCCTGTGAGGCTGATGATGCCCTTGAT GAGCTGCACTACGAGGCGCTTCGCAGCGAGGCGCTCCGTCGTGGGCACAAAATCAATAGT GGCGTAAGGGCTTTCTTCACTTCTCATTATAATCCTTTACTGTTCAAGTATAGGATAGGA AAGAGACTCCAGCAGATAGTTGAAAAGATTGATAAGCTTGTTTTGCAAATGAATCGATTT GGGTTCCTAAATTGCCCCATGCCAGTGGATGAGAGGATGCAGACCTATTCCTACGTTGAC GAGCAGGAAGTTATTGGAAGGCAGAAAGAAAGAGATGAAATCATCCATATGCTTCTAAGT GCCAAGAGTGACAAATTGCTAATACTTCCTATTGTTGGGATAGGAGGATTGGGCAAGACA ACTCTTGCACAGCTGGTCTTCAATGACGTGAAAGTGAAAGCACATTTTCAAAAGCATATG TGGGTTTGTGTCTCAGAGAACTTCAGTGTTCCTGATATTGTCAAGGGGATAATTGACACT GCAATTGGGAATGATTGTGGACTGAAGAGTGATAACCTGGAATTGCTACAACAACGTCTC CGGGAAGAACTGAGCCAAAAGAGGTACCTCCTTGTACTAGATGATGTTTGGAATGAAGAT GAACAAAAATGGGAGGCTCTAAGAACATTGCTTTGTTCCTGTAAAATGGGAAGTGCGGTG GTTGTCACTACCCGAAATTCGAATGTTGCGTCAGTCATGGGGACAGTTCCTCCATTGGCT CTAGAACAACTTAGCCAAGAAGATTCCTGGACTCTATTCTGTGAAAGAGCGTTCCGTACA GGTGTGGCCAAGTCTTGTGAGTTTGTCGAGATTGGTACAAAAATTGTTCAAAAATGTTCT GGAGTCCCATTAGCAATAAATAGTATGGGAGGCCTGCTGAGTAGAAAACATAGTGTAAGG GATTGGCTGGCGATCCTTCAAAACAATACTTGGGAGGAAAATAACATACTGACAGTCCTA TCATTGAGCTACAAACATCTACCTTCTTTTATGAAACAGTGCTTTGCTTTTTGTGCTGTA TTCCCAAAGGACTACGAGATTGATAAGGATGATCTAATACATCTGTGGATATCAAATGGA TTCATTCCATCTAAAGAGACCTCGGACATAGAAGAAACTGGGAACAAGGTTTTTCTGGAG CTTCTTTGGAGATCATTTTTCCAAAATGCGAAGCAAACTCGGTCCCGCAAGGAAGAGTAC ATATATGGGTACAAAGATGTAACTACATGCAAAATTCATGATCTTATGCATGATCTTGCA GTTTCTATAAGCGGGGATGAGTGCTATACTTTGCAAAATCTTGTTGAAATAAATAAAATG CCGAAGAATGTCCATCATCTAGTTTTTCCGCATCCGCACAAGATTGGTTTCGTGATGCAG CGTTGTCCAATTATCCGAAGTCTATTTAGTTTACATAAGAATCGTATGGATTCTATGAAG GATGTCAGATTCATGGTGTCCCCTTGTAGAGTGCTTGGGCTTCATATCTGTGGCAATGAA ATATTCTCAGTTGAACCAGCATATATGAAGCACTTGCGATATCTTGATTTATCCTCTAGC GACATAAAAACACTCCCTGAAGCGGTCAGCGCACTGTACAATTTACAAATACTAATGCTC AATAGATGCAGGGGCCTGACTCACCTGCCTGACGGCATGAAATTTATGATCAGCCTTCGC CATGTGTACCTTGATGGTTGTTCTAGTCTACAAAGGATGCCGCCGGGTCTAGGGCAGCTC AGCAGTTTACGAACATTGACAATGTATATGGTTGGTAATGAATCTGATCGTAGACTTCAT GAACTCAAGGACTTAGAACTTGGGGGCAAGCTACAAATACATAATTTGCTGAAGGTAACA AATCCGTTACAAGCAAAAGAAGCCAACCTTGAGAATAAGAAAAATCTTCAGCAACTAGCA CTTTGTTGGGACTCACGAAATTTCACCTGTTCACATAGTCATTCTGCAGATGAATATTTG CAATTATGCTGTCCTGAAGAAGTGCTGGATGCTCTTAAGCCTCCCAACGGATTAAAAGTT CTAAAGCTAAGGCAATATATGGGCAGCGACTTTCCAATGTGGATGGAAGATGGTGTGACA CTACAAAATATTGTTAAACTCAGTTTGAGAGGCTCTGTAATGTGTGTCAAACTCCCACCA GTGTGGCAGCTTCCCTTTCTTGAAGTTCTCCGTCTCAAACGAATGGAGAGGTTGAAATAC TTGTGTTACAGGTACCCCACTGATGAAGAATATGGCAACCAATTAGTGGTATTTCAAAAA TTAAAATTATTGTCACTAGAATGGATGGAATCCTTAGAGAACTGGCATGAATATGACACT CAACAAGTGACATCAGTTACTTTTCCAAAGCTGGACGCCATGGAAATTATAGACTGCCCA AAACTGACAGCACTGCCTAATGTTCCGATTCTTAAGTCTTTAAGTTTGACAGGAAACAAA GTACTGCTGGGGTTAGTGTCAGGTATTAGTAATCTATCATATCTGTATCTCGGTGCAAGT CAAGGGAGTTCACGGAGGGTAAGAACACTATACTATATCTATAATGGAGAACGTGAAGGA AGCACTGATACAAAGGATGAGCATATTTTGCCCGATCACTTGTTGTCATGGGGTTCACTC ACTAAACTACACCTACAAGGATTCAATACACCAGCACCAGAAAATGTGAAGAGTATAAGT GGTCACATGATGTCTGTGCAAGACTTAGTCCTGTCTTCTTGTGATTGCTTCATCCAACAT GAAGGATTACAGTCACCACTATGGTTCTGGATATCATTTGGATGCCTACAACAATTAGAA ATCTGGTACTGTGATAGCCTCACCTTTTGGCCAGAGGAGGAGTTCCGAAGCTTGACTTCT TTAGAAAAACTCTTCATTGTAGATTGCAAAAACTTCACGGGTGTACCACCTGACCGACTG TCAGCAAGGCCCTCTACAGATGGAGGCCCATGTAATTTGGAATACTTACAGATTGATCGC TGCCCCAACTTAGTGGTATTCCCTACAAACTTCATCTGCCTACGGATCCTTGTGATAACT CACAGTAATGTACTTGAGGGCCTGCCTGGAGGATTTGGTTGCCAGGACACTCTAACAACT CTCGTAATTTTGGGTTGCCCAAGTTTTAGCTCCCTGCCTGCCAGCATTCGGTGTCTTTCA AATCTGAAAAGCCTAGAACTGGCAAGTAATAACAGCTTAACCTCCTTGCCTGAAGGGATG CAGAATCTAACTGCTCTCAAAACACTACATTTTATTAAATGTCCTGGTATAACCGCTTTA CCAGAAGGTCTCCAGCAAAGACTGCATGGCCTCCAAACGTTCACCGTTGAAGATTGCCCT GCTCTGGCGAGGAGATGCAGACGTGGGGGAGATTATTGGGAGAAAGTCAAGGACATTCCT GATTTACGAGTGACAAGTGAGCCGCGCCCTGTCTGGCAAGATGCAGCCAGAACCATCATT CCTAAATGCTTGAACGCTTGGCAAAGAAGAGCATCAAGTTCTGGGCAGCCAGACAATTAA

Peptide Sequence

PEP ID	Os05t0380300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:18377097:18382814:1 gene:Os05g0380300 transcript:Os05t0380300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog A1.1-4 description:Similar to NBS-LRR protein (Fragment). (Os05t0380300-01)
Sequence	MAELLSALLPALLKKAGESISTEFAFIGGIERKCSELKTSLLAINQVIYDAEEQASKKPA VKSWIAKLKMAACEADDALDELHYEALRSEALRRGHKINSGVRAFFTSHYNPLLFKYRIG KRLQQIVEKIDKLVLQMNRFGFLNCPMPVDERMQTYSYVDEQEVIGRQKERDEIIHMLLS AKSDKLLILPIVGIGGLGKTTLAQLVFNDVKVKAHFQKHMWVCVSENFSVPDIVKGIIDT AIGNDCGLKSDNLELLQQRLREELSQKRYLLVLDDVWNEDEQKWEALRTLLCSCKMGSAV VVTTRNSNVASVMGTVPPLALEQLSQEDSWTLFCERAFRTGVAKSCEFVEIGTKIVQKCS GVPLAINSMGGLLSRKHSVRDWLAILQNNTWEENNILTVLSLSYKHLPSFMKQCFAFCAV FPKDYEIDKDDLIHLWISNGFIPSKETSDIEETGNKVFLELLWRSFFQNAKQTRSRKEEY IYGYKDVTTCKIHDLMHDLAVSISGDECYTLQNLVEINKMPKNVHHLVFPHPHKIGFVMQ RCPIIRSLFSLHKNRMDSMKDVRFMVSPCRVLGLHICGNEIFSVEPAYMKHLRYLDLSSS DIKTLPEAVSALYNLQILMLNRCRGLTHLPDGMKFMISLRHVYLDGCSSLQRMPPGLGQL SSLRTLTMYMVGNESDRRLHELKDLELGGKLQIHNLLKVTNPLQAKEANLENKKNLQQLA LCWDSRNFTCSHSHSADEYLQLCCPEEVLDALKPPNGLKVLKLRQYMGSDFPMWMEDGVT LQNIVKLSLRGSVMCVKLPPVWQLPFLEVLRLKRMERLKYLCYRYPTDEEYGNQLVVFQK LKLLSLEWMESLENWHEYDTQQVTSVTFPKLDAMEIIDCPKLTALPNVPILKSLSLTGNK VLLGLVSGISNLSYLYLGASQGSSRRVRTLYYIYNGEREGSTDTKDEHILPDHLLSWGSL TKLHLQGFNTPAPENVKSISGHMMSVQDLVLSSCDCFIQHEGLQSPLWFWISFGCLQQLE IWYCDSLTFWPEEEFRSLTSLEKLFIVDCKNFTGVPPDRLSARPSTDGGPCNLEYLQIDR CPNLVVFPTNFICLRILVITHSNVLEGLPGGFGCQDTLTTLVILGCPSFSSLPASIRCLS NLKSLELASNNSLTSLPEGMQNLTALKTLHFIKCPGITALPEGLQQRLHGLQTFTVEDCP ALARRCRRGGDYWEKVKDIPDLRVTSEPRPVWQDAARTIIPKCLNAWQRRASSSGQPDN

Transcript Sequence

Transcript ID	Os05t0380300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18377097:18382814:1 gene:Os05g0380300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog A1.1-4 description:Similar to NBS-LRR protein (Fragment). (Os05t0380300-01)
Sequence	AGATTCAAAGACTTAACTAGTAGTACCAGCTAGACGCTATACTGACTCCTCAATTCACCA TTGTCCTCCCATCCATACTGTTCTACCATTACTCCTTTCATCCCTGGGATCTGAGCCATG GCAGAGTTACTCTCAGCTCTTCTGCCTGCCCTCCTCAAGAAAGCTGGTGAGTCTATCTCA ACGGAGTTTGCCTTCATTGGGGGTATTGAGCGCAAGTGTTCGGAGCTGAAAACCTCGCTG CTCGCTATCAACCAAGTGATCTATGATGCCGAGGAGCAGGCGTCCAAGAAGCCTGCTGTG AAGTCCTGGATCGCCAAGCTGAAGATGGCTGCCTGTGAGGCTGATGATGCCCTTGATGAG CTGCACTACGAGGCGCTTCGCAGCGAGGCGCTCCGTCGTGGGCACAAAATCAATAGTGGC GTAAGGGCTTTCTTCACTTCTCATTATAATCCTTTACTGTTCAAGTATAGGATAGGAAAG AGACTCCAGCAGATAGTTGAAAAGATTGATAAGCTTGTTTTGCAAATGAATCGATTTGGG TTCCTAAATTGCCCCATGCCAGTGGATGAGAGGATGCAGACCTATTCCTACGTTGACGAG CAGGAAGTTATTGGAAGGCAGAAAGAAAGAGATGAAATCATCCATATGCTTCTAAGTGCC AAGAGTGACAAATTGCTAATACTTCCTATTGTTGGGATAGGAGGATTGGGCAAGACAACT CTTGCACAGCTGGTCTTCAATGACGTGAAAGTGAAAGCACATTTTCAAAAGCATATGTGG GTTTGTGTCTCAGAGAACTTCAGTGTTCCTGATATTGTCAAGGGGATAATTGACACTGCA ATTGGGAATGATTGTGGACTGAAGAGTGATAACCTGGAATTGCTACAACAACGTCTCCGG GAAGAACTGAGCCAAAAGAGGTACCTCCTTGTACTAGATGATGTTTGGAATGAAGATGAA CAAAAATGGGAGGCTCTAAGAACATTGCTTTGTTCCTGTAAAATGGGAAGTGCGGTGGTT GTCACTACCCGAAATTCGAATGTTGCGTCAGTCATGGGGACAGTTCCTCCATTGGCTCTA GAACAACTTAGCCAAGAAGATTCCTGGACTCTATTCTGTGAAAGAGCGTTCCGTACAGGT GTGGCCAAGTCTTGTGAGTTTGTCGAGATTGGTACAAAAATTGTTCAAAAATGTTCTGGA GTCCCATTAGCAATAAATAGTATGGGAGGCCTGCTGAGTAGAAAACATAGTGTAAGGGAT TGGCTGGCGATCCTTCAAAACAATACTTGGGAGGAAAATAACATACTGACAGTCCTATCA TTGAGCTACAAACATCTACCTTCTTTTATGAAACAGTGCTTTGCTTTTTGTGCTGTATTC CCAAAGGACTACGAGATTGATAAGGATGATCTAATACATCTGTGGATATCAAATGGATTC ATTCCATCTAAAGAGACCTCGGACATAGAAGAAACTGGGAACAAGGTTTTTCTGGAGCTT CTTTGGAGATCATTTTTCCAAAATGCGAAGCAAACTCGGTCCCGCAAGGAAGAGTACATA TATGGGTACAAAGATGTAACTACATGCAAAATTCATGATCTTATGCATGATCTTGCAGTT TCTATAAGCGGGGATGAGTGCTATACTTTGCAAAATCTTGTTGAAATAAATAAAATGCCG AAGAATGTCCATCATCTAGTTTTTCCGCATCCGCACAAGATTGGTTTCGTGATGCAGCGT TGTCCAATTATCCGAAGTCTATTTAGTTTACATAAGAATCGTATGGATTCTATGAAGGAT GTCAGATTCATGGTGTCCCCTTGTAGAGTGCTTGGGCTTCATATCTGTGGCAATGAAATA TTCTCAGTTGAACCAGCATATATGAAGCACTTGCGATATCTTGATTTATCCTCTAGCGAC ATAAAAACACTCCCTGAAGCGGTCAGCGCACTGTACAATTTACAAATACTAATGCTCAAT AGATGCAGGGGCCTGACTCACCTGCCTGACGGCATGAAATTTATGATCAGCCTTCGCCAT GTGTACCTTGATGGTTGTTCTAGTCTACAAAGGATGCCGCCGGGTCTAGGGCAGCTCAGC AGTTTACGAACATTGACAATGTATATGGTTGGTAATGAATCTGATCGTAGACTTCATGAA CTCAAGGACTTAGAACTTGGGGGCAAGCTACAAATACATAATTTGCTGAAGGTAACAAAT CCGTTACAAGCAAAAGAAGCCAACCTTGAGAATAAGAAAAATCTTCAGCAACTAGCACTT TGTTGGGACTCACGAAATTTCACCTGTTCACATAGTCATTCTGCAGATGAATATTTGCAA TTATGCTGTCCTGAAGAAGTGCTGGATGCTCTTAAGCCTCCCAACGGATTAAAAGTTCTA AAGCTAAGGCAATATATGGGCAGCGACTTTCCAATGTGGATGGAAGATGGTGTGACACTA CAAAATATTGTTAAACTCAGTTTGAGAGGCTCTGTAATGTGTGTCAAACTCCCACCAGTG TGGCAGCTTCCCTTTCTTGAAGTTCTCCGTCTCAAACGAATGGAGAGGTTGAAATACTTG TGTTACAGGTACCCCACTGATGAAGAATATGGCAACCAATTAGTGGTATTTCAAAAATTA AAATTATTGTCACTAGAATGGATGGAATCCTTAGAGAACTGGCATGAATATGACACTCAA CAAGTGACATCAGTTACTTTTCCAAAGCTGGACGCCATGGAAATTATAGACTGCCCAAAA CTGACAGCACTGCCTAATGTTCCGATTCTTAAGTCTTTAAGTTTGACAGGAAACAAAGTA CTGCTGGGGTTAGTGTCAGGTATTAGTAATCTATCATATCTGTATCTCGGTGCAAGTCAA GGGAGTTCACGGAGGGTAAGAACACTATACTATATCTATAATGGAGAACGTGAAGGAAGC ACTGATACAAAGGATGAGCATATTTTGCCCGATCACTTGTTGTCATGGGGTTCACTCACT AAACTACACCTACAAGGATTCAATACACCAGCACCAGAAAATGTGAAGAGTATAAGTGGT CACATGATGTCTGTGCAAGACTTAGTCCTGTCTTCTTGTGATTGCTTCATCCAACATGAA GGATTACAGTCACCACTATGGTTCTGGATATCATTTGGATGCCTACAACAATTAGAAATC TGGTACTGTGATAGCCTCACCTTTTGGCCAGAGGAGGAGTTCCGAAGCTTGACTTCTTTA GAAAAACTCTTCATTGTAGATTGCAAAAACTTCACGGGTGTACCACCTGACCGACTGTCA GCAAGGCCCTCTACAGATGGAGGCCCATGTAATTTGGAATACTTACAGATTGATCGCTGC CCCAACTTAGTGGTATTCCCTACAAACTTCATCTGCCTACGGATCCTTGTGATAACTCAC AGTAATGTACTTGAGGGCCTGCCTGGAGGATTTGGTTGCCAGGACACTCTAACAACTCTC GTAATTTTGGGTTGCCCAAGTTTTAGCTCCCTGCCTGCCAGCATTCGGTGTCTTTCAAAT CTGAAAAGCCTAGAACTGGCAAGTAATAACAGCTTAACCTCCTTGCCTGAAGGGATGCAG AATCTAACTGCTCTCAAAACACTACATTTTATTAAATGTCCTGGTATAACCGCTTTACCA GAAGGTCTCCAGCAAAGACTGCATGGCCTCCAAACGTTCACCGTTGAAGATTGCCCTGCT CTGGCGAGGAGATGCAGACGTGGGGGAGATTATTGGGAGAAAGTCAAGGACATTCCTGAT TTACGAGTGACAAGTGAGCCGCGCCCTGTCTGGCAAGATGCAGCCAGAACCATCATTCCT AAATGCTTGAACGCTTGGCAAAGAAGAGCATCAAGTTCTGGGCAGCCAGACAATTAATTT ATACTACAAAGGTACCTACGCTGAAACATTGTTGAAACAGAATGTGTCTTAAGTGAATGA AGTGCATTGCATTTCTCTGCTCGCAACGTATATCTTGACCTGCTGGGATCAAGGCCTTTT TGTAACAATGTACAAATTGTGGATATACTGATATTGATTGGAGTTCCACTGCTCAACACT GATTGTGTGATTTCGAGGAATTCCCTCTTTCTTGTCGGAGTTGCCAAATATATTTCTACA TCTGACCCAAAGGATATGGGGTTCTGTGTAACATCTGATAAACAATAGGTGGTGCATACT TCTTTCCACCAAGTGAACCAAACAAAGATCTGGAGACCTGGAGTTCTGAAGACTTACCAT GAATCTTTCGCTGGGGACCTGGAGCTGGTGCCGTGCAAGCCCGAGGTCGTGAGGGGGCTA CGCTATGGTTCGCTGCTTCTCGCTGGCCATGACCGAATAGCCACAATGATGTGTGTTTGA ATGGTGGCCGGTGATGAGGAAGAACTATGGGAAGCAAAAAGACGTTGATGTTGCGGTCGT TCTTGTTTGTTGGTAAGATTTAGAAGGAGCACAACGCGCACGTATTTCAAAAATGTTTCA TATCCACCGGTACAAGTTCTTAACGCTATTTGGAAGGAATTCTTATTTCTTGGAAAATAA CAGACTTGTTTTCGTAGCTCGATCGACGGCTTTTGTCTTAGTTGTAAATGTTGTAGCCGT TTGTTGTTGTGTGTAATGCCAGTTGGCTTTATCAGGGTCAGGTACGTTATTGAGTGATTT GTTATTCTGATTT