Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0378900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:18319332:18323976:-1 gene:Os05g0378900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Golgi transport complex protein-related. (Os05t0378900-01);Similar to predicted protein. (Os05t0378900-02);Non-protein coding transcript. (Os05t0378900-03)
Sequence	ATGGCCGCGCCAGCGACGCCGCGGCTACTCCTCTCGCCGACCTCCAAGGACCTCATCGCC GCCGCCTCCTCCTCCTTCCCGTCGCCGCCCTCCCCGACGACCTCTTCCGATCCCGCCTCC CCGCTCGACGCCTTCGCCTCCGACCCGGTCCTCTCCGCGTTCCTCTCCCCGTCCTTCTCC CCCTCCGACTTCTCCTCCGCCGCGCTCTCCTCGGGCCTCGCCGCCTCCCGCGCCGAGCAG CTGCAGGAGGCCATCCGCCTCCTCCGCCGCCACCTCCGCGCCGAGGTGCTCCGCCGCCAC CCGCTCCTCCTCTCCCACCTCCTCTCCCTCCGCTCCGCCTCCGCCTCGCTCTCCTCCCTC CCCTCCCACCTCCACCTCCTCTCCTCCCACCTCTCGCTCCTCTCCTCCCATCTCTCCGCG CCGCGCGCACACCTCGCGCACTCCTCCTCCTCCCTCTCCACCCTCCTCTCCACCGCCGAC CTCCTGCTCCACTCCCACCGCCTCGTCCGCCTCTCCTCCCGCCTCCTCACCTCCACGCCG CCTCCTGACCTCGCCCGCCAGGCCGAGCTCCACCGCGAGATCCGCCTTCTCTACGAGGAG AAGAACCTCGCCGGCATCAATGCCGTCGACGAGGAGATGCGCAAGGTCGATGCGGCTGCC TCTAAGCTCCGATCGGAGGCCAGCGCTGTGATCGATCGCGGCATTGCTGAGTCCAACCAG AACGACGTCTGGTGCGGGCTGCAGGTGTACTATAATCTCGGAGAACTGAAGCCGGCAGTG GAAGGGCTCGTGGCGAAGTACAAGGCGGCAGGAGCGAAGAGTGTGGCTGTGGCACTGGAC ATGAAGGCTATATCAATGGCTGCAGGGGGTGGAGGTGGCCCTGGAGGCGTGCAGAGGAGT GGCACGCCACAGATTGGTGGCAGTAAGAAGGCGGCGGAGGCACTGTGGGATAGGATGAGA CAGTGCATGGAGGAGCTGCATCGGTCGGTCACGGCCGCATGGCAGCTGCAGACTGTGCTC ACCAAGAAACGTGTTCCATTCACACAAATGCTGTTCCTCGAGGAGGTTTGGCAGGAGGGT GATCCTCTGTTAACAGAGAGAGTATGGGATGCTATTGTTAAGGCCTTTGCAAGTCAACTG AAATCTGCCTTTACAGCGTCAAGCTTTGTGAAGGAAATTTTTACTCTTGGATACCCAAGA TTGTTTTCAATGATTGAGAACCTCCTCGAGAGGATTTTAAGAGACACCGATGTAAAAGGC ACCCTTCCAGCTCTTACTCCCGTAGGGAAAAACCACATGACTGCAGCCATTGAGATATTC CAGACAGCCTTTCTGGCTCTTTGTCATAGTCGCCTCTCTGATTATATCAATAGCATATTT CCCATGTCAGGCCGTGGTATACCTTCAAAAGACCAAATATCAAGGTTAATTTCTCGCATC CAAGAGGAAGTTGAAGTTGTGAGAACTCATGGGCATTTGCTTGCTCGTGTTCTACAAGAA ATTGGAAAAGTTTTGCTTCTCCTAGCACAAAGAGCTGAATATCAGATCTCTACTGGCACT GAAGCCCGGCAAGTTACTGGCACAGTGACTCCAGCTCAACTGAAAAACTTTGCTCTATGT CTTCACCTCCAGGATGTTCACACACGTATTTCAAGCATTGTGTCAACACTTCCAAATGTT ACCTCTGAAAAACTTTCCAAATCCCTTGAGGCCATTTATACAGTCGCGTGTGATTCAGTG AGCCCTCTATTCAAAGAAATGTTTGATCGTCTCGGATCATGCATTCTGAAAATGCACGAG CAGGACTTTGGAACTCATGGAATGGACGCAACAATGGATAACAACGCTTCAGCTTACATG GAGGAACTGCAGAAGTGTGCTGTCCACTTCCGTAGCGAGTTCTTGTCAAAGCTTCTACCT TCATCATCATCCCGCTCAGAGACCATCTGTACCATAATGGTTAGAAGTATGGCCTCAAGA GTCCTCATATTGTTCATAAGGCACGCCTCTCTAGTTAGGCCACTCTCTGAAGCCGGGAAG CTGAGAATGACAAGGGACATGGCCGAGCTGGAGCTCGCTGTTGGTCAGAATCTGTTTCCA GTGGAGCAGCTAGGCGCACCGTACCGGGCGCTGCGTGCATTCAGGCCTGTCCTATTCCTG GAGACGTCTCAGCTTGAGAAATCTCCACTCCTTCAGGACTTGCCCCCTAGTGTGATCCTC CACCACCTATATTCTCGAGGACCTGATGAGTTACAGTCTCCATTGCAGCGTAACAAGCTC ACGCCGCTGCAGTATTCTCTCTGGCTTGATTCCCAGGGCGAGGATCAGATCTGGAAAGGG GTGAAAGCAACCTTGGATGACTACGAGATGAAGGTCAGGTCTCGCGGAGATAAGGAGTTC AGCCCTGTGTACCCTCTCATGCTTCAGATTGGATCTGCATTGTCTCAGGCCAAGGGCTAA

Peptide Sequence

PEP ID	Os05t0378900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:18319332:18323976:-1 gene:Os05g0378900 transcript:Os05t0378900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Golgi transport complex protein-related. (Os05t0378900-01);Similar to predicted protein. (Os05t0378900-02);Non-protein coding transcript. (Os05t0378900-03)
Sequence	MAAPATPRLLLSPTSKDLIAAASSSFPSPPSPTTSSDPASPLDAFASDPVLSAFLSPSFS PSDFSSAALSSGLAASRAEQLQEAIRLLRRHLRAEVLRRHPLLLSHLLSLRSASASLSSL PSHLHLLSSHLSLLSSHLSAPRAHLAHSSSSLSTLLSTADLLLHSHRLVRLSSRLLTSTP PPDLARQAELHREIRLLYEEKNLAGINAVDEEMRKVDAAASKLRSEASAVIDRGIAESNQ NDVWCGLQVYYNLGELKPAVEGLVAKYKAAGAKSVAVALDMKAISMAAGGGGGPGGVQRS GTPQIGGSKKAAEALWDRMRQCMEELHRSVTAAWQLQTVLTKKRVPFTQMLFLEEVWQEG DPLLTERVWDAIVKAFASQLKSAFTASSFVKEIFTLGYPRLFSMIENLLERILRDTDVKG TLPALTPVGKNHMTAAIEIFQTAFLALCHSRLSDYINSIFPMSGRGIPSKDQISRLISRI QEEVEVVRTHGHLLARVLQEIGKVLLLLAQRAEYQISTGTEARQVTGTVTPAQLKNFALC LHLQDVHTRISSIVSTLPNVTSEKLSKSLEAIYTVACDSVSPLFKEMFDRLGSCILKMHE QDFGTHGMDATMDNNASAYMEELQKCAVHFRSEFLSKLLPSSSSRSETICTIMVRSMASR VLILFIRHASLVRPLSEAGKLRMTRDMAELELAVGQNLFPVEQLGAPYRALRAFRPVLFL ETSQLEKSPLLQDLPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQGEDQIWKG VKATLDDYEMKVRSRGDKEFSPVYPLMLQIGSALSQAKG

Transcript Sequence

Transcript ID	Os05t0378900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18319332:18323976:-1 gene:Os05g0378900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Golgi transport complex protein-related. (Os05t0378900-01);Similar to predicted protein. (Os05t0378900-02);Non-protein coding transcript. (Os05t0378900-03)
Sequence	ACTCTCCTCAGATCTCTACCCCATCTCTCCCACCGCTTCTCAGATCCACCACCAACACCC GCGGTCGCCGGCGGCCACCGCGCGCGCCATGGCCGCGCCAGCGACGCCGCGGCTACTCCT CTCGCCGACCTCCAAGGACCTCATCGCCGCCGCCTCCTCCTCCTTCCCGTCGCCGCCCTC CCCGACGACCTCTTCCGATCCCGCCTCCCCGCTCGACGCCTTCGCCTCCGACCCGGTCCT CTCCGCGTTCCTCTCCCCGTCCTTCTCCCCCTCCGACTTCTCCTCCGCCGCGCTCTCCTC GGGCCTCGCCGCCTCCCGCGCCGAGCAGCTGCAGGAGGCCATCCGCCTCCTCCGCCGCCA CCTCCGCGCCGAGGTGCTCCGCCGCCACCCGCTCCTCCTCTCCCACCTCCTCTCCCTCCG CTCCGCCTCCGCCTCGCTCTCCTCCCTCCCCTCCCACCTCCACCTCCTCTCCTCCCACCT CTCGCTCCTCTCCTCCCATCTCTCCGCGCCGCGCGCACACCTCGCGCACTCCTCCTCCTC CCTCTCCACCCTCCTCTCCACCGCCGACCTCCTGCTCCACTCCCACCGCCTCGTCCGCCT CTCCTCCCGCCTCCTCACCTCCACGCCGCCTCCTGACCTCGCCCGCCAGGCCGAGCTCCA CCGCGAGATCCGCCTTCTCTACGAGGAGAAGAACCTCGCCGGCATCAATGCCGTCGACGA GGAGATGCGCAAGGTCGATGCGGCTGCCTCTAAGCTCCGATCGGAGGCCAGCGCTGTGAT CGATCGCGGCATTGCTGAGTCCAACCAGAACGACGTCTGGTGCGGGCTGCAGGTGTACTA TAATCTCGGAGAACTGAAGCCGGCAGTGGAAGGGCTCGTGGCGAAGTACAAGGCGGCAGG AGCGAAGAGTGTGGCTGTGGCACTGGACATGAAGGCTATATCAATGGCTGCAGGGGGTGG AGGTGGCCCTGGAGGCGTGCAGAGGAGTGGCACGCCACAGATTGGTGGCAGTAAGAAGGC GGCGGAGGCACTGTGGGATAGGATGAGACAGTGCATGGAGGAGCTGCATCGGTCGGTCAC GGCCGCATGGCAGCTGCAGACTGTGCTCACCAAGAAACGTGTTCCATTCACACAAATGCT GTTCCTCGAGGAGGTTTGGCAGGAGGGTGATCCTCTGTTAACAGAGAGAGTATGGGATGC TATTGTTAAGGCCTTTGCAAGTCAACTGAAATCTGCCTTTACAGCGTCAAGCTTTGTGAA GGAAATTTTTACTCTTGGATACCCAAGATTGTTTTCAATGATTGAGAACCTCCTCGAGAG GATTTTAAGAGACACCGATGTAAAAGGCACCCTTCCAGCTCTTACTCCCGTAGGGAAAAA CCACATGACTGCAGCCATTGAGATATTCCAGACAGCCTTTCTGGCTCTTTGTCATAGTCG CCTCTCTGATTATATCAATAGCATATTTCCCATGTCAGGCCGTGGTATACCTTCAAAAGA CCAAATATCAAGGTTAATTTCTCGCATCCAAGAGGAAGTTGAAGTTGTGAGAACTCATGG GCATTTGCTTGCTCGTGTTCTACAAGAAATTGGAAAAGTTTTGCTTCTCCTAGCACAAAG AGCTGAATATCAGATCTCTACTGGCACTGAAGCCCGGCAAGTTACTGGCACAGTGACTCC AGCTCAACTGAAAAACTTTGCTCTATGTCTTCACCTCCAGGATGTTCACACACGTATTTC AAGCATTGTGTCAACACTTCCAAATGTTACCTCTGAAAAACTTTCCAAATCCCTTGAGGC CATTTATACAGTCGCGTGTGATTCAGTGAGCCCTCTATTCAAAGAAATGTTTGATCGTCT CGGATCATGCATTCTGAAAATGCACGAGCAGGACTTTGGAACTCATGGAATGGACGCAAC AATGGATAACAACGCTTCAGCTTACATGGAGGAACTGCAGAAGTGTGCTGTCCACTTCCG TAGCGAGTTCTTGTCAAAGCTTCTACCTTCATCATCATCCCGCTCAGAGACCATCTGTAC CATAATGGTTAGAAGTATGGCCTCAAGAGTCCTCATATTGTTCATAAGGCACGCCTCTCT AGTTAGGCCACTCTCTGAAGCCGGGAAGCTGAGAATGACAAGGGACATGGCCGAGCTGGA GCTCGCTGTTGGTCAGAATCTGTTTCCAGTGGAGCAGCTAGGCGCACCGTACCGGGCGCT GCGTGCATTCAGGCCTGTCCTATTCCTGGAGACGTCTCAGCTTGAGAAATCTCCACTCCT TCAGGACTTGCCCCCTAGTGTGATCCTCCACCACCTATATTCTCGAGGACCTGATGAGTT ACAGTCTCCATTGCAGCGTAACAAGCTCACGCCGCTGCAGTATTCTCTCTGGCTTGATTC CCAGGGCGAGGATCAGATCTGGAAAGGGGTGAAAGCAACCTTGGATGACTACGAGATGAA GGTCAGGTCTCGCGGAGATAAGGAGTTCAGCCCTGTGTACCCTCTCATGCTTCAGATTGG ATCTGCATTGTCTCAGGCCAAGGGCTAAACCTGTGTTCAGTTCAACCCAGCATCACATAT GTTTGTATCATCATCATGTAGGCATTGGGTACTTGAGAGATCGATTGAGCTTTGGAATAG TTTATACAAATGAAATAGCATTTGCATTTGTTTTTTTTATGGAAATAAAGGTGTTCAAAG TACAGACTCTTTCTCCTAGCTCCTATTATGTTGTGAAGTGTGTGATATGATTGATCATTG T