Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0374200-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:18032481:18035180:1 gene:Os05g0374200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOKININ OXIDASE/DEHYDROGENASE 9 description:Similar to Cytokinin dehydrogenase 2. (Os05t0374200-00)
Sequence	ATGAGGCCATCACTCTTGCAGTATCTGAAGCTGCTCCTGTTACTTGCCCTTGGTGGTGTC ACCACCATGCATGTGCCTAAACAAGATGTGCCATCATCCCTGGAGGAACTCACCCTTGAT GGCCATTTCAGCTTCCACGATGTGTCTGCTGCTGCACAGGACTTTGGCAACCTGTCCAGC TTCCCGCCGGTTGCGGTGCTTCATCCTGGCTCAGTGGCTGACATTGCCACAACCATCAGG CATGTGTTCTTGATGGGTGAGCACTCCACGCTCACAGTGGCAGCCCGTGGACATGGGCAC TCGCTGTATGGGCAGTCCCAGGCTGCTGAGGGAATCATCATCAGTATGGAATCCCTCCAG AGTAACACAATGAGGGTGAACCCTGGCGTATCACCCTATGTCGATGCTTCAGGAGGAGAA CTCTGGATAAATGTTTTGCATGAGACTCTGAAGTATGGTTTAGCACCAAAGTCGTGGACG GACTATCTCCATCTCACGGTTGGAGGCACACTGTCGAATGCAGGAGTCAGTGGGCAGACC TTCCGGCATGGCCCACAGATCAGCAATGTCAACGAGCTGGAAATTGTGACTGGAAGAGGT GATGTTATCACATGCTCACCTGAACAAAACTCTGATCTCTTCCATGCTGCCCTTGGTGGC CTAGGTCAGTTTGGCGTCATCACAAGAGCCAGGATTCCTCTTGAACCTGCTCCAAAAATG GTAAGGTGGCTACGAGTTCTCTACTTGGATTTCACAAGCTTCACCGAAGACCAGGAAATG CTCATTTCAGCAGAGAAGACATTTGACTACATCGAGGGCTTTGTCATCATAAATAGGACA GGCATCCTGAACAACTGGAGGTCGTCCTTCAATCCGCAGGACCCAGTGCGTTCTAGCCAG TTTGAATCAGATGGAAAAGTGCTCTTCTGCCTTGAGATGACAAAGAACTTCAACCCTGAC GAGGCTGATGTCATGGAACAGGAGGTCAACACACTGCTGTCTCAACTTAGATATATGCCT TCCTCCTTATTCCACACGGATGTAACATACATAGAGTTCTTGGATAGGGTACACTCTTCT GAGATGAAGTTGAGAGCTAAGGGCATGTGGGAAGTCCCACACCCATGGCTTAATATCATC ATTCCAAGAAGCATGATCCATAAATTTGCGAAGGAGGTCTTTGGGAAAATCCTGAAAGAC AGTAACAATGGTCCCATATTACTCTATCCAGTGAACAAATCCAGATGGGACAACAGAACA TCAGTAGTCATACCAGATGAGGAAGTTTTCTACCTGGTGGCATTCCTATCCTCAGCACTT GGCCCCCATAACATCAAACATACATTGGACCTGAACTACAGGATAATAGAGTTCTCTGAC AAGGCAGGTATTGGAGTGAAGCAGTATCTCCCAAACTATACCACAGAACAGGAGTGGCAG TCCCATTTTGGTGCAAGGTGGGACACATTTCAACAGAGGAAAAAAGCCTATGACCCCTTG GCCATCTTAGCTCCAGGACAAAGAATATTTCAAAAGGCATCAGCGTCACTACCCTTGCCC TCATGA

Peptide Sequence

PEP ID	Os05t0374200-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:18032481:18035180:1 gene:Os05g0374200 transcript:Os05t0374200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOKININ OXIDASE/DEHYDROGENASE 9 description:Similar to Cytokinin dehydrogenase 2. (Os05t0374200-00)
Sequence	MRPSLLQYLKLLLLLALGGVTTMHVPKQDVPSSLEELTLDGHFSFHDVSAAAQDFGNLSS FPPVAVLHPGSVADIATTIRHVFLMGEHSTLTVAARGHGHSLYGQSQAAEGIIISMESLQ SNTMRVNPGVSPYVDASGGELWINVLHETLKYGLAPKSWTDYLHLTVGGTLSNAGVSGQT FRHGPQISNVNELEIVTGRGDVITCSPEQNSDLFHAALGGLGQFGVITRARIPLEPAPKM VRWLRVLYLDFTSFTEDQEMLISAEKTFDYIEGFVIINRTGILNNWRSSFNPQDPVRSSQ FESDGKVLFCLEMTKNFNPDEADVMEQEVNTLLSQLRYMPSSLFHTDVTYIEFLDRVHSS EMKLRAKGMWEVPHPWLNIIIPRSMIHKFAKEVFGKILKDSNNGPILLYPVNKSRWDNRT SVVIPDEEVFYLVAFLSSALGPHNIKHTLDLNYRIIEFSDKAGIGVKQYLPNYTTEQEWQ SHFGARWDTFQQRKKAYDPLAILAPGQRIFQKASASLPLPS

Transcript Sequence

Transcript ID	Os05t0374200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:18032481:18035180:1 gene:Os05g0374200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOKININ OXIDASE/DEHYDROGENASE 9 description:Similar to Cytokinin dehydrogenase 2. (Os05t0374200-00)
Sequence	GGGAAGAAACTTAATCAGATATGCTTGAGAGGAGGCTTGCCACTTGTAAATATGAAAGCA CAGAGATAGCACTTTGGCTCATCCTCGCAAAGACCAACATGAATTTTTGCATGAGAAATC GAATTTGAGGGATCAAGCAGGCCTGCTCAGGAGCAACCAGGTTTGCCACTTGAATACCTG ATATCACTTCTTTTTCCCTACATATGACTTCATCAGAATCTCAATCCTTCTGAGATCCAC ACCAGAAGAGCCATGAGGCCATCACTCTTGCAGTATCTGAAGCTGCTCCTGTTACTTGCC CTTGGTGGTGTCACCACCATGCATGTGCCTAAACAAGATGTGCCATCATCCCTGGAGGAA CTCACCCTTGATGGCCATTTCAGCTTCCACGATGTGTCTGCTGCTGCACAGGACTTTGGC AACCTGTCCAGCTTCCCGCCGGTTGCGGTGCTTCATCCTGGCTCAGTGGCTGACATTGCC ACAACCATCAGGCATGTGTTCTTGATGGGTGAGCACTCCACGCTCACAGTGGCAGCCCGT GGACATGGGCACTCGCTGTATGGGCAGTCCCAGGCTGCTGAGGGAATCATCATCAGTATG GAATCCCTCCAGAGTAACACAATGAGGGTGAACCCTGGCGTATCACCCTATGTCGATGCT TCAGGAGGAGAACTCTGGATAAATGTTTTGCATGAGACTCTGAAGTATGGTTTAGCACCA AAGTCGTGGACGGACTATCTCCATCTCACGGTTGGAGGCACACTGTCGAATGCAGGAGTC AGTGGGCAGACCTTCCGGCATGGCCCACAGATCAGCAATGTCAACGAGCTGGAAATTGTG ACTGGAAGAGGTGATGTTATCACATGCTCACCTGAACAAAACTCTGATCTCTTCCATGCT GCCCTTGGTGGCCTAGGTCAGTTTGGCGTCATCACAAGAGCCAGGATTCCTCTTGAACCT GCTCCAAAAATGGTAAGGTGGCTACGAGTTCTCTACTTGGATTTCACAAGCTTCACCGAA GACCAGGAAATGCTCATTTCAGCAGAGAAGACATTTGACTACATCGAGGGCTTTGTCATC ATAAATAGGACAGGCATCCTGAACAACTGGAGGTCGTCCTTCAATCCGCAGGACCCAGTG CGTTCTAGCCAGTTTGAATCAGATGGAAAAGTGCTCTTCTGCCTTGAGATGACAAAGAAC TTCAACCCTGACGAGGCTGATGTCATGGAACAGGAGGTCAACACACTGCTGTCTCAACTT AGATATATGCCTTCCTCCTTATTCCACACGGATGTAACATACATAGAGTTCTTGGATAGG GTACACTCTTCTGAGATGAAGTTGAGAGCTAAGGGCATGTGGGAAGTCCCACACCCATGG CTTAATATCATCATTCCAAGAAGCATGATCCATAAATTTGCGAAGGAGGTCTTTGGGAAA ATCCTGAAAGACAGTAACAATGGTCCCATATTACTCTATCCAGTGAACAAATCCAGATGG GACAACAGAACATCAGTAGTCATACCAGATGAGGAAGTTTTCTACCTGGTGGCATTCCTA TCCTCAGCACTTGGCCCCCATAACATCAAACATACATTGGACCTGAACTACAGGATAATA GAGTTCTCTGACAAGGCAGGTATTGGAGTGAAGCAGTATCTCCCAAACTATACCACAGAA CAGGAGTGGCAGTCCCATTTTGGTGCAAGGTGGGACACATTTCAACAGAGGAAAAAAGCC TATGACCCCTTGGCCATCTTAGCTCCAGGACAAAGAATATTTCAAAAGGCATCAGCGTCA CTACCCTTGCCCTCATGACAGTATCTAATGTAAATA