Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0373000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:17965061:17970698:-1 gene:Os05g0373000 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os05t0373000-01)
Sequence	ATGGGCAGCGTGGACTTCGGCCTCGTCGAGATCCACCCCGGGGAGATCCGGTTCGAATTT GAGGTGAAGAAGAAAAGTTCATGTTATGTCTGTCTAGTGAACAAATCAGAGGAATATGTT GCATTCAAGGTCAAAACAACTTCTCCAAAAAGGTATTGTGTTCGACCAAATGTAGGAGTC ATTCTTCCAAGGGCAACATGTGTTTTTACAGTTATTATGCAAGCACAAATGATTGCTCCA CCAGATCTGCAAATAAGAGACAAGTTTCTTGTGCAGACCACAGTTGTTCCTTTTGGTACA GCTGACGAAGACATTGCTCCTGCTTTTTTTTCCAAAGAAGTGGGAAGATATATCGAGGAG AATAAGCTGAGAGTTGTTCTTGTCAGTGCGACTCAACTTGAAGAACAGCAACTCATTGCA GGAGTTCCCAGTGCTAAGACTGGTGTTGAGGTTCGTGTGGCAAAAGAGACACTGAATATT GAGAGTGAAGCATCTAATGTCATGAACGAAGTTCATCATTCCTTGAAAACAAACTTCCCC CCTCTGAGAGAAAATCCAGCTACTTTGAACGAAATGCCCTTCCCTGTAAAACAAACAACT ATTCTGGCCCCATCAAAAGAAGTTCCAGCTATTTCAGCAGAAAGTGCTCACCATTGGAAA GAAACCCCTGCTGAAAGCTTGTTTTCAAGTAATGCAGTTCATCATTCGCTGAAAACAAGT TTCCCCCCTCTCAGAGAAAATCCAGCTACTTTGAATGAAATGCCCTTCCCTGTAAAACAA ACAACTATTCTGCCCCCATCAGAAGAAGTTCCAGCTATTTCAGCAGAAAGTGGTCACCAT TGGAAAGAAACCCCTGCTGAAAGCTTGTTTGCAACGAATGCACTTCCTCATTCCCTGAAA ACAAGCTGTCTTCTCAGAGAAAATCCAGCTATTTTGAATGAAATTCCCTTCCCTGTAAGA CAAACAACTATTTTGCCCCCATTAAAAGAAGTTCCAGTTATTTCAGCAGAAAGTGCTCAC CATTGGAAAGAAACCCTTAATGTTTCTCTAGAATCTCATTTTTCATCAACAGAAACAAAT GTTGTCTCGAGTGAGTGCCCTGAAACATTGGAAAATACTTCTCCTTCAAAAGAATTTGCC ATCTTAAGAGATACACTTGTCAATGCAGAGAATCTTCACTATGTAACTGATGATGTTCAG AATCTAATGACAAAACTCAGTAACCTAGAAGCAAAACTAGAAGAGGCTGAAAGTGTGATA GTTAAACTGAGGGAGGACACCAGAACTACCATTAGGGAGCGGGATAAGCTAAAGCACGAA ATGGTCGTCTTGACAAGGAAGGGCGCTTCACGGAGCCAGGCTGGTTTCCCTTTGCTGTTT GTGGTCTACATGGCGATCCTTGGCGCGTCACTCGGTTACCTGTTGCACCTATGA

Peptide Sequence

PEP ID	Os05t0373000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:17965061:17970698:-1 gene:Os05g0373000 transcript:Os05t0373000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os05t0373000-01)
Sequence	MGSVDFGLVEIHPGEIRFEFEVKKKSSCYVCLVNKSEEYVAFKVKTTSPKRYCVRPNVGV ILPRATCVFTVIMQAQMIAPPDLQIRDKFLVQTTVVPFGTADEDIAPAFFSKEVGRYIEE NKLRVVLVSATQLEEQQLIAGVPSAKTGVEVRVAKETLNIESEASNVMNEVHHSLKTNFP PLRENPATLNEMPFPVKQTTILAPSKEVPAISAESAHHWKETPAESLFSSNAVHHSLKTS FPPLRENPATLNEMPFPVKQTTILPPSEEVPAISAESGHHWKETPAESLFATNALPHSLK TSCLLRENPAILNEIPFPVRQTTILPPLKEVPVISAESAHHWKETLNVSLESHFSSTETN VVSSECPETLENTSPSKEFAILRDTLVNAENLHYVTDDVQNLMTKLSNLEAKLEEAESVI VKLREDTRTTIRERDKLKHEMVVLTRKGASRSQAGFPLLFVVYMAILGASLGYLLHL

Transcript Sequence

Transcript ID	Os05t0373000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:17965061:17970698:-1 gene:Os05g0373000 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os05t0373000-01)
Sequence	GGCGTCCCTATCCCATCCGTCGTCCGTCCCCGTACGTCCGCCACCCAGTCGCCTTCCCCC CTCCCTCCGTCTCCACCGCTTCTCCCGCCGCCTCTTCTCCTCCAACCACCAGACGGCGAC CACCGCGGCACACACACAGAGACCCCCAGATGCTTCCGCCGACTCCGATCAGCAGCCGCT CGCCACCAGCCCACCACCAGTGAGTGACGCGACGCGACCGGCGGCGGCGGCGATGGGCAG CGTGGACTTCGGCCTCGTCGAGATCCACCCCGGGGAGATCCGGTTCGAATTTGAGGTGAA GAAGAAAAGTTCATGTTATGTCTGTCTAGTGAACAAATCAGAGGAATATGTTGCATTCAA GGTCAAAACAACTTCTCCAAAAAGGTATTGTGTTCGACCAAATGTAGGAGTCATTCTTCC AAGGGCAACATGTGTTTTTACAGTTATTATGCAAGCACAAATGATTGCTCCACCAGATCT GCAAATAAGAGACAAGTTTCTTGTGCAGACCACAGTTGTTCCTTTTGGTACAGCTGACGA AGACATTGCTCCTGCTTTTTTTTCCAAAGAAGTGGGAAGATATATCGAGGAGAATAAGCT GAGAGTTGTTCTTGTCAGTGCGACTCAACTTGAAGAACAGCAACTCATTGCAGGAGTTCC CAGTGCTAAGACTGGTGTTGAGGTTCGTGTGGCAAAAGAGACACTGAATATTGAGAGTGA AGCATCTAATGTCATGAACGAAGTTCATCATTCCTTGAAAACAAACTTCCCCCCTCTGAG AGAAAATCCAGCTACTTTGAACGAAATGCCCTTCCCTGTAAAACAAACAACTATTCTGGC CCCATCAAAAGAAGTTCCAGCTATTTCAGCAGAAAGTGCTCACCATTGGAAAGAAACCCC TGCTGAAAGCTTGTTTTCAAGTAATGCAGTTCATCATTCGCTGAAAACAAGTTTCCCCCC TCTCAGAGAAAATCCAGCTACTTTGAATGAAATGCCCTTCCCTGTAAAACAAACAACTAT TCTGCCCCCATCAGAAGAAGTTCCAGCTATTTCAGCAGAAAGTGGTCACCATTGGAAAGA AACCCCTGCTGAAAGCTTGTTTGCAACGAATGCACTTCCTCATTCCCTGAAAACAAGCTG TCTTCTCAGAGAAAATCCAGCTATTTTGAATGAAATTCCCTTCCCTGTAAGACAAACAAC TATTTTGCCCCCATTAAAAGAAGTTCCAGTTATTTCAGCAGAAAGTGCTCACCATTGGAA AGAAACCCTTAATGTTTCTCTAGAATCTCATTTTTCATCAACAGAAACAAATGTTGTCTC GAGTGAGTGCCCTGAAACATTGGAAAATACTTCTCCTTCAAAAGAATTTGCCATCTTAAG AGATACACTTGTCAATGCAGAGAATCTTCACTATGTAACTGATGATGTTCAGAATCTAAT GACAAAACTCAGTAACCTAGAAGCAAAACTAGAAGAGGCTGAAAGTGTGATAGTTAAACT GAGGGAGGACACCAGAACTACCATTAGGGAGCGGGATAAGCTAAAGCACGAAATGGTCGT CTTGACAAGGAAGGGCGCTTCACGGAGCCAGGCTGGTTTCCCTTTGCTGTTTGTGGTCTA CATGGCGATCCTTGGCGCGTCACTCGGTTACCTGTTGCACCTATGATTCTGATTGATTGG TGCAGCTGGAGACGAAGTAACAGTATCACAGGGAGTACGTGCTGAGCTTTCTCACAGCAG CTGGAGTAGGAAAAGAAAAGAAATCAGAGGCAGGTAGCCTCCTCTTGGTACTGAATCAGG GATGAACTCTTGTCACGTGACGATCGTCACAACAATTAGTTCAGGCGTCCACTTACTAGG TGATTAACCAATTAAACGGAGTACATAAAACAGCATGATTTTTTATTTACGCTGTACATA ACCTCTTTATATAAGTTTCCTGCCCGTGGACCGTGGTCGCTAGAGATAATCCAGGATGTT GTTCAGAGTTAAAACCTTTGTCACTACTACTAGTTGCCACGGAAACTAGTTTGATGCTGT TGACTTTTTTTTCC