Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0372000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:17914214:17917811:-1 gene:Os05g0372000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L22/L17 family protein. (Os05t0372000-01)
Sequence	ATGGCGTCGCGACTCGTGGCCCGGTCGAGGAGAGGCCTAGCGCTCGCCCTCTCCCGCGCC GGCGCCGGCGCCCCGTCGCGGCCCTCCCCTCCTGGCCTCGGCAAGACTCTGGGGTATGAG CCAACATCACATCTCCATGGTGCTCAGTTTTTACCTTGTTGGTTTTCAACTATTGCATCT AATGGATCTCACATGCAAAAGGCACAGGAGACATGTAAGCCAGTTGCTGGAATGGAACAC TCTGATGCACTGAAAGTAATGGAAGGAACCTCTCCTAAAGTTGTGGCATTCAGCCCACTA GAAGCAGCTATCACTAAACCTAGAAGCAGTCCCTTGACAATTGAAAGTTCTAAAGTAAAG CGATCAGAGATTGCAACGCTAGTCACATTTTACATGATCCCTTCTCTGCTTGTTTCCTCA AAAAATGGGCTTGCTACCTCTATTTTGGTTGGCGCAGTATTCCATCAAATATACATGTTT CACAAGGAGATATTTCTGGACTATGTGCACCATGATATCACCAGGAAGTGGGCTTTGATA TACTTCAAGCTGCTTTTGTTGATCATGGCGAAGGAAACCATTGTGTATTTCAACTTTATC TGA

Peptide Sequence

PEP ID	Os05t0372000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:17914214:17917811:-1 gene:Os05g0372000 transcript:Os05t0372000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L22/L17 family protein. (Os05t0372000-01)
Sequence	MASRLVARSRRGLALALSRAGAGAPSRPSPPGLGKTLGYEPTSHLHGAQFLPCWFSTIAS NGSHMQKAQETCKPVAGMEHSDALKVMEGTSPKVVAFSPLEAAITKPRSSPLTIESSKVK RSEIATLVTFYMIPSLLVSSKNGLATSILVGAVFHQIYMFHKEIFLDYVHHDITRKWALI YFKLLLLIMAKETIVYFNFI

Transcript Sequence

Transcript ID	Os05t0372000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:17914214:17917811:-1 gene:Os05g0372000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L22/L17 family protein. (Os05t0372000-01)
Sequence	GGCGGCGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCGCCATGGCGTCGCGACTC GTGGCCCGGTCGAGGAGAGGCCTAGCGCTCGCCCTCTCCCGCGCCGGCGCCGGCGCCCCG TCGCGGCCCTCCCCTCCTGGCCTCGGCAAGACTCTGGGGTATGAGCCAACATCACATCTC CATGGTGCTCAGTTTTTACCTTGTTGGTTTTCAACTATTGCATCTAATGGATCTCACATG CAAAAGGCACAGGAGACATGTAAGCCAGTTGCTGGAATGGAACACTCTGATGCACTGAAA GTAATGGAAGGAACCTCTCCTAAAGTTGTGGCATTCAGCCCACTAGAAGCAGCTATCACT AAACCTAGAAGCAGTCCCTTGACAATTGAAAGTTCTAAAGTAAAGCGATCAGAGATTGCA ACGCTAGTCACATTTTACATGATCCCTTCTCTGCTTGTTTCCTCAAAAAATGGGCTTGCT ACCTCTATTTTGGTTGGCGCAGTATTCCATCAAATATACATGTTTCACAAGGAGATATTT CTGGACTATGTGCACCATGATATCACCAGGAAGTGGGCTTTGATATACTTCAAGCTGCTT TTGTTGATCATGGCGAAGGAAACCATTGTGTATTTCAACTTTATCTGAGTTTTATCTCTT GCAGAGGGACAATCTATGTACTCATCCATACACCAGAAAAAATGACGGTGGTGGATAAAA TTCTGGCGCCTTGTTCTCTTCATGGACATTTTCAACATTTTTCCTTCTCAACTTCATTTG TATATGCACTTGAAAGAGGATGATTAGTGATCAATGAAGCAATTAGTTCGACTTCATTCT TGTTTATAATAATAGCAACTGATATGAACTGTTTGGTATTTGCTAGCACGATGCAGCCAT ATGGATTTTGTTTTCCATGTATGAATTATCATCTTATGTGCATATATTTCTCCTTTTGGA GGCTTGAGCTGCCATTATTTTTTTGCGAATCCTTCAGACTCCAGTCCTACATGAATCCAG CGCTATGCTCCTTTTTGGAGGTTTTGTTACTGCAGAGATGATTGTGTGTTTAACTTTATT GATTGGTTTGATTGTTTCTGCAGATGTTACAAAGATTGGCCGGTTGCAGTTTGTTTGAAA TGCTAGGATTCAGAAGTCCCTCCAGATGCTTGCTTCAAATATACTTACTACTCAGTAAAT GATAGGAGTACTGCTCTGTAAATGCATGAAAAAACAGTGATGGAGAAATCTGATGCTTGT GTACCCAATGATGCAGGATCAGTCCTCCTTGGTGAACACGCTGGAATTTCCCAATAATTT GCAGTATCCCACAACATTCAGAAAACCAAATTCCTTGGAAATTCACGACACAAGGTAAAG AACAAAAACCCATGACGTTTTGCTTTGCAATTTGCAGGTAGGGCTCTGCTGTCCTTGCTG CTGCTGCTGGATTTGAAAGAAAAAAACCTGTGTACGATGTACGTACGCCGGCTGCATCCT TGTACAGCCATGTTCATGTGAGAGCGGAAAAAACTGCCTTCCAGCTCAGCTCTGCAGGGC TGAATTGCCGCCTGGATCCTGCGGCCGCCATGTTTACCCGGGACGGCCGGCCGGACGGCG GCGACCCCATCGGCTGCCACGCGCACATGCCCGGCGACCGACGGCCGCCGGTGCTGACTG TGAATTGACATGAATGCTGCCACTGCCTGTGCCTGCAATGTCCCAGCTTGCTTTGCAGGA GGCAGCAGCAGCAGCAGCTAGCTGTGGTAGAATGGCTGCTTCTGTGACCGTCTCTGCATT GCAGAGAGATGCAGTGAGTGTGTGTTGAGTGACTCCTCCAGCTGGGAGCTCCAGGAATTC ACCTCCCCACACACAGTCACAGTCACAAACACACTCCCAGTGCATTACCTGTCTGTCTGC ACTGTGCATGCAGTGAAACCTCTGAACATTTTCACCGTGGCATTCTGAATTCTGATCCGG CAATCAATCAACCAGCCCTTGCAGTTATTAGTGAAGTGCAGATGTATCATGTATCTGTCC AGCCATCAAATGCTGCAGTGGAGAACAGGGAACTGAAGGGGGTTCTTGGATTTGGCTTCT TTACTTTTTCGCTGATTTTATTTTTTTTTCTCTGGCACCTGCTTTTATTTCTTCAGATCT CATATTATCATCACCATATGGGTGGTTTTGCAAGAGTGGACCTGAGGTTCTTGCAGCAAT GCAGCCGCAGGACCCATAGAAAGGACCATTGAAAACTGTGGCACAAAACATGCATAGTGA AAATGGCGCAGGCATTACAGAGAAAAGTAGTAGATATGCTAGCTATAATTTCAGGATTGT GCAATTTTGTTGTCTTCCCTGGCTATGGAGTACGGAGTATCATGTTACAACTCACCATGT CTTTACATATGGTTAACTTCACTTGTGACTCTCTCTTTTAAATAAAAATAGAATGACCCT TTTTCTCTT