Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0365500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:17522715:17526483:1 gene:Os05g0365500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os05t0365500-01)
Sequence	ATGGCGCTCTACCGCCGTCTCCTCCTCCTCCGCCGCCTCTCCACCCTCCACCCGCACCCC TCCCTCTCCTCCTCCTCCTCCTCCACCGCCTCCCCCGCCGCCGCCGCTTCCGCCACGCAC CACCTCCTCCCTCCCCACGCGCCGCTCGCACCCCACGCCCGTGGCTTCGCCTTCTCCTCC GCCGAGGAGGCCGCGGCCGAGCGGCGGAGGCGCAAGCGGAGGCTCCGCATCGAGCCGCCG CTCCACGCGCTCCGCCGCGACCCTTCCGCCCCGCCCCCGCCGCGCGACCCCAACGCACCG CGCCTCCCGGACACCACCTCCGCGCTCGTCGGCCCGCGCCTCAGCCTCCATAACCGCGTC CAGTCCCTCATCCGATCCGGCGACCTCGACGGCGCCTCCGTCGCTGCACGCGCCGCGGTC ACCTCCCGCGTCCGCCCCACCGTCTTCACCTGCAACGCCGTGGCGGCGTCCATGGTCCGC GCGGGGCGCCACGACGACGCCGTCTCCCTCTTCGACTTCTTCTTCCGCCGATCCAACATC GTCCCCAACGTCGTCTCCTACAACACCCTCATCCTCGCCCACTGCGAGGCCGCCCGCGTC GACTCCGCGCTGCAGGTGTACCGCGAGATGCTCGACAAGGCCCCCTTCTCGCCCTCCGCC GTCACCTACCGCCACCTCACCAAGGGCCTCGTCGCCGCCGGCCGCATCCAGGACGCCCTC GATCTCCTGCGCGAGATGCTCAACCGCGGCCAGGGCGCCGACTCCCTCGTGTACAATAAT CTCATCGCCGGTTACATCGAGGAAGATAACTGGGACAAGGCATTCGAGCTCTTTGAGGAG CTCCAGGGGAGGTGCTTGGTCTACGATGGTGTCGTGCACACCTCCTTCATGGAGGGGTAC TGGAAGAAAGGAATGGACAAGGAGGCCATGGAGAATTACCAGTCGCTATTGGACAAGAAG TTCAGGATGACCCCCGCCACCTGCAATGTGCTGCTTGAGACGCTCTTCAAGCATGATAAG GACAAGGAGGCGAATGACCTCTGGGAGACCATGATCGACAACCACACCCCGCCGAGCTTC ATTGGCATCAACAGCGAGTCCTACAATGTCATGGTCAATCAGTGCTTCAAGAAGTGCAAA TTCCATGAGGCAATTGAGGTGTTCCACCGGCAGCCCAGGAAGAACGTCCAGATGGACGTT GGCTGCTTCAACAACATCATCGGGAAGCTTTGTGAGAATGGAATGCTTGAAGAGGCAGAG AAGCTTTTTGAGGAAATGGAAACCAAGTCGGTGCTTCCAGACGTGTACACCTACACTTAC CTGGTTGATTCATGCTTCAAGGTGGGCCGCGTGGATGATACAATTCAGTATTTCTATAAG ATGGCAGACGGAAGGGAGCATGGCCCGAAGTTCAATATTGGTTTCTTCAATCGGATGTTT GAAGGGCTTACAGAAGCTGGCCGGATGGATGATGCCTTGAAGGTATATGGAAGGATGCCT GACAAGGAGATCAAGCCAAACACAACCACCTTTGAGACCCTGGTTAATGCATTGTGTAAG GAAGGGGACTTGGATAAAGCACGGGAGTTGGTGAGTGACATGGCAAAAGGCGGTGTCACT CCTCCTCCTGAGTTCCGGGATTCTGTTATTGACATTTTTAAGAACGCTGGCCGGCAGGAA GAGATTGAGAAAGCTTTTGAAGAGAAACCAGTGCCATTGCCTCCTCAGCCAAGGCCAGAG TATCGCCCTCGCAATTCACCTCAGGGGCTGCCAGGATTTGCATCCAATCAGACACGGGGT AGCTACATGCCTCACCAAGGCCAACCGACATATGGTTCTCAACCACTTCATCCTGGCGTT GGTGGATCCCAAGCGATACAGCCTCAGGGGATGCCTTTGAGACCTCAGCAACCTGTGTTT GGAGGCCCTCAAGTTGATAAATCAGAGTTTGGTGGCCGCCCGTTGCAGCATGGACCTAGC GCCCCTGATCCACGACAACCTGGGGTTGTCTCCATGACTCAACCTCCAAATGTCAGTACT CCCAATACATGGCAGCATTCTGGAGTTCATGCAACTCAAGGAACACACCATGGGATGGGT TCTCCTCGTCCATGGCAACAATCAGTTGGCATTGGTCAAGTGCAACAAACTGATTATAGC TCGGGTCCACCGATGCAGCCTGGTTTTGGTCACCCTCAACCACCACAACCAATGCATAGT GCTCCTCAGACTCAGCAGCCTGGGTATGGCACATCTCATCCATGGCATACAGGGTTCAAT GCTCCACAAGTGCAACAGCCTAGTTATGGTGGACCTCAGTCATCGCAGCATGCTGTTGGC TCCACTCAGCCACCGCAGGCACAGTTTGGTGCTCCTCAAGCACCACCACCATTACCTGGT TTTCACTATCAGAACAGACCAGAGTATGGTCAAGCAGTAGATCAGCATAATCGTTTTGGG TCTCCCCAGGGTGAGCCAAGATTTCACACACAGCCTCGACAGCAGGGATTTGATGCTCAG GCTCCTGGAAATCATGCTCTGCAAGGTCAGAACAGTTTTAACGCTCGTCGAGGACAAGTA GGGTTTGGAAATCAAGGGGCACCGCCTGAATATGGGGCTTCCCCAAGCCAACCCTCACAT GGTGCTGCCTGGAACCAAAGAGGCTATGGATTGTCTGAAGATCAAGAAGATGTAAATCAG CAAGTGGTGCCTCATGCTTATGCACGTGTAAGATGA

Peptide Sequence

PEP ID	Os05t0365500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:17522715:17526483:1 gene:Os05g0365500 transcript:Os05t0365500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os05t0365500-01)
Sequence	MALYRRLLLLRRLSTLHPHPSLSSSSSSTASPAAAASATHHLLPPHAPLAPHARGFAFSS AEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPPRDPNAPRLPDTTSALVGPRLSLHNRV QSLIRSGDLDGASVAARAAVTSRVRPTVFTCNAVAASMVRAGRHDDAVSLFDFFFRRSNI VPNVVSYNTLILAHCEAARVDSALQVYREMLDKAPFSPSAVTYRHLTKGLVAAGRIQDAL DLLREMLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVVHTSFMEGY WKKGMDKEAMENYQSLLDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMIDNHTPPSF IGINSESYNVMVNQCFKKCKFHEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLEEAE KLFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQYFYKMADGREHGPKFNIGFFNRMF EGLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVT PPPEFRDSVIDIFKNAGRQEEIEKAFEEKPVPLPPQPRPEYRPRNSPQGLPGFASNQTRG SYMPHQGQPTYGSQPLHPGVGGSQAIQPQGMPLRPQQPVFGGPQVDKSEFGGRPLQHGPS APDPRQPGVVSMTQPPNVSTPNTWQHSGVHATQGTHHGMGSPRPWQQSVGIGQVQQTDYS SGPPMQPGFGHPQPPQPMHSAPQTQQPGYGTSHPWHTGFNAPQVQQPSYGGPQSSQHAVG STQPPQAQFGAPQAPPPLPGFHYQNRPEYGQAVDQHNRFGSPQGEPRFHTQPRQQGFDAQ APGNHALQGQNSFNARRGQVGFGNQGAPPEYGASPSQPSHGAAWNQRGYGLSEDQEDVNQ QVVPHAYARVR

Transcript Sequence

Transcript ID	Os05t0365500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:17522715:17526483:1 gene:Os05g0365500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os05t0365500-01)
Sequence	GTTGAAGATCGCCGCCGCCTCCCTCACCACCGCCACAAACTTCGTCTCCCGCCGCCGCCG CCCCCCACCGCGACGCCATGGCGCTCTACCGCCGTCTCCTCCTCCTCCGCCGCCTCTCCA CCCTCCACCCGCACCCCTCCCTCTCCTCCTCCTCCTCCTCCACCGCCTCCCCCGCCGCCG CCGCTTCCGCCACGCACCACCTCCTCCCTCCCCACGCGCCGCTCGCACCCCACGCCCGTG GCTTCGCCTTCTCCTCCGCCGAGGAGGCCGCGGCCGAGCGGCGGAGGCGCAAGCGGAGGC TCCGCATCGAGCCGCCGCTCCACGCGCTCCGCCGCGACCCTTCCGCCCCGCCCCCGCCGC GCGACCCCAACGCACCGCGCCTCCCGGACACCACCTCCGCGCTCGTCGGCCCGCGCCTCA GCCTCCATAACCGCGTCCAGTCCCTCATCCGATCCGGCGACCTCGACGGCGCCTCCGTCG CTGCACGCGCCGCGGTCACCTCCCGCGTCCGCCCCACCGTCTTCACCTGCAACGCCGTGG CGGCGTCCATGGTCCGCGCGGGGCGCCACGACGACGCCGTCTCCCTCTTCGACTTCTTCT TCCGCCGATCCAACATCGTCCCCAACGTCGTCTCCTACAACACCCTCATCCTCGCCCACT GCGAGGCCGCCCGCGTCGACTCCGCGCTGCAGGTGTACCGCGAGATGCTCGACAAGGCCC CCTTCTCGCCCTCCGCCGTCACCTACCGCCACCTCACCAAGGGCCTCGTCGCCGCCGGCC GCATCCAGGACGCCCTCGATCTCCTGCGCGAGATGCTCAACCGCGGCCAGGGCGCCGACT CCCTCGTGTACAATAATCTCATCGCCGGTTACATCGAGGAAGATAACTGGGACAAGGCAT TCGAGCTCTTTGAGGAGCTCCAGGGGAGGTGCTTGGTCTACGATGGTGTCGTGCACACCT CCTTCATGGAGGGGTACTGGAAGAAAGGAATGGACAAGGAGGCCATGGAGAATTACCAGT CGCTATTGGACAAGAAGTTCAGGATGACCCCCGCCACCTGCAATGTGCTGCTTGAGACGC TCTTCAAGCATGATAAGGACAAGGAGGCGAATGACCTCTGGGAGACCATGATCGACAACC ACACCCCGCCGAGCTTCATTGGCATCAACAGCGAGTCCTACAATGTCATGGTCAATCAGT GCTTCAAGAAGTGCAAATTCCATGAGGCAATTGAGGTGTTCCACCGGCAGCCCAGGAAGA ACGTCCAGATGGACGTTGGCTGCTTCAACAACATCATCGGGAAGCTTTGTGAGAATGGAA TGCTTGAAGAGGCAGAGAAGCTTTTTGAGGAAATGGAAACCAAGTCGGTGCTTCCAGACG TGTACACCTACACTTACCTGGTTGATTCATGCTTCAAGGTGGGCCGCGTGGATGATACAA TTCAGTATTTCTATAAGATGGCAGACGGAAGGGAGCATGGCCCGAAGTTCAATATTGGTT TCTTCAATCGGATGTTTGAAGGGCTTACAGAAGCTGGCCGGATGGATGATGCCTTGAAGG TATATGGAAGGATGCCTGACAAGGAGATCAAGCCAAACACAACCACCTTTGAGACCCTGG TTAATGCATTGTGTAAGGAAGGGGACTTGGATAAAGCACGGGAGTTGGTGAGTGACATGG CAAAAGGCGGTGTCACTCCTCCTCCTGAGTTCCGGGATTCTGTTATTGACATTTTTAAGA ACGCTGGCCGGCAGGAAGAGATTGAGAAAGCTTTTGAAGAGAAACCAGTGCCATTGCCTC CTCAGCCAAGGCCAGAGTATCGCCCTCGCAATTCACCTCAGGGGCTGCCAGGATTTGCAT CCAATCAGACACGGGGTAGCTACATGCCTCACCAAGGCCAACCGACATATGGTTCTCAAC CACTTCATCCTGGCGTTGGTGGATCCCAAGCGATACAGCCTCAGGGGATGCCTTTGAGAC CTCAGCAACCTGTGTTTGGAGGCCCTCAAGTTGATAAATCAGAGTTTGGTGGCCGCCCGT TGCAGCATGGACCTAGCGCCCCTGATCCACGACAACCTGGGGTTGTCTCCATGACTCAAC CTCCAAATGTCAGTACTCCCAATACATGGCAGCATTCTGGAGTTCATGCAACTCAAGGAA CACACCATGGGATGGGTTCTCCTCGTCCATGGCAACAATCAGTTGGCATTGGTCAAGTGC AACAAACTGATTATAGCTCGGGTCCACCGATGCAGCCTGGTTTTGGTCACCCTCAACCAC CACAACCAATGCATAGTGCTCCTCAGACTCAGCAGCCTGGGTATGGCACATCTCATCCAT GGCATACAGGGTTCAATGCTCCACAAGTGCAACAGCCTAGTTATGGTGGACCTCAGTCAT CGCAGCATGCTGTTGGCTCCACTCAGCCACCGCAGGCACAGTTTGGTGCTCCTCAAGCAC CACCACCATTACCTGGTTTTCACTATCAGAACAGACCAGAGTATGGTCAAGCAGTAGATC AGCATAATCGTTTTGGGTCTCCCCAGGGTGAGCCAAGATTTCACACACAGCCTCGACAGC AGGGATTTGATGCTCAGGCTCCTGGAAATCATGCTCTGCAAGGTCAGAACAGTTTTAACG CTCGTCGAGGACAAGTAGGGTTTGGAAATCAAGGGGCACCGCCTGAATATGGGGCTTCCC CAAGCCAACCCTCACATGGTGCTGCCTGGAACCAAAGAGGCTATGGATTGTCTGAAGATC AAGAAGATGTAAATCAGCAAGTGGTGCCTCATGCTTATGCACGTGTAAGATGAAGGATAT CTCCATGATGCATACTCAATAAGAGCAACTCAGGTTCCTCAAGCATCAGCTAGTTCAATA GCATTTGGTTTGGGACTATTTTTCGGAAATGAAATCTTTTGGACCAGGGAAAAATATTGA GTTAGTCATTCAACTATGTTAACACTGATTATACGTTTGTGATGGTTTAGTCACCAATTG GTCAACTCAGTAATCATATTGCTAGAATATTTTGTGCTTGTCAACTTTGACCTTTTTCCT CTCTCTATTTTCCTGAAAGAAAGGCCATGCTGGTATGCTTGTATGTATTTCTCACGTGTG GGATTCTTTTTTTGTTGCTTGGATTAGTTATGCTCTCTATTTACTCACTGCTCCAGTAAA CTTCAACGGTATGCAAAAAGATACATTTCCTTTTGTC