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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0363200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:17343645:17347620:-1 gene:Os05g0363200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-xylose synthase 5, UDP-glucuronic acid decarboxylase 5 description:UDP-glucuronic acid decarboxylase. (Os05t0363200-01)
Sequence

ATGGCGTCGGAGCTGACCTACCGCGGCGGCGGCGGCGCGACGCTGGCCGGCGAGGCGGAG
GCGGCGGTAGCGGCGGGGGGGTACTCCCCGAAGCCGTCCAAGCCGCTCGCGTGGCTCCCC
CGCGCCGCCCGGTACGCCGCCGGCGAGCACCGCCCGCTCTTCGCCCTCGCCGGGATGCTC
GTCGCCGCTGCCATCTTCTCCCTCGCCACCCCGTACTCCTCCTCCACCCCCGCCGCCGCG
GCCGCCGGTTCAACCGCGGCGAACCCGCTGGCGCGGTTCTCGGTGGAGCCGGCGGTGAGC
CGGCGGCAGCAGCAGCTGCCGGCGAGGCAGTTCGTGGGCGGGAAGGTGCCGCTGGGGCTG
AAGCGGAAGGGGCTCCGGGTGCTGGTGACCGGCGGCGCCGGGTTCGTGGGGAGCCACCTG
GTGGACCGGCTGGTGGAGCGCGGCGACAGCGTGATCGTGGTGGACAACCTGTTCACGGGG
CGGAAGGAGAACGTGGTGCACCACTTCGGCAACCCAAACTTCGAGATGATCCGCCACGAC
GTCGTCGAGCCCATCCTCCTCGAGGTCGACCAGATCTACCACCTCGCCTGCCCCGCTTCC
CCCGTTCACTACAAGTACAACCCCGTCAAGACAATCAAGACCAATGTGGTTGGGACTCTC
AACATGCTCGGATTGGCGAAGAGGATCAATGCCAGGTTCCTCCTCACCAGCACCAGTGAG
GTCTACGGTGATCCCCTGCAGCATCCTCAAGTGGAGACTTACTGGGGCAATGTCAACCCC
ATTGGTGTGAGGAGTTGTTACGATGAGGGCAAGCGCACAGCTGAAACTTTGACCATGGAC
TATCACCGTGGTGCCAACCTTGAGGTTAGGATCGCTCGTATCTTCAACACATATGGCCCT
CGCATGTGCATCGATGATGGCCGTGTTGTCAGCAACTTTGTTGCTCAGGCTTTGAGGAAG
GAGCCTTTGACGGTTTACGGTGATGGCAAGCAGACCAGGAGTTTCCAATATGTCTCTGAT
CTGGTTGAGGGATTGATGAGGCTCATGGAAGGTGAGCACGTAGGGCCATTCAACCTGGGT
AACCCTGGTGAGTTCACCATGCTGGAGCTGGCCAAGGTTGTCCAGGACACCATCGACCCT
AACGCAAAGATCGAGTTCCGTCCCAACACCCAGGACGACCCGCACAAGCGCAAGCCTGAC
ATCGGCCGTGCCAAGGAGCTCCTTGGGTGGGAGCCAAAGATCCCTCTCCACAAGGGTCTT
CCCCTCATGGTCACCGACTTCCGCAAGCGCATTTTCGGTGACCAAGACAGCACCGCCACA
ACCACCGGAGGCCAACAAGGGTAG

Peptide Sequence

PEP ID

Os05t0363200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:17343645:17347620:-1 gene:Os05g0363200 transcript:Os05t0363200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-xylose synthase 5, UDP-glucuronic acid decarboxylase 5 description:UDP-glucuronic acid decarboxylase. (Os05t0363200-01)
Sequence

MASELTYRGGGGATLAGEAEAAVAAGGYSPKPSKPLAWLPRAARYAAGEHRPLFALAGML
VAAAIFSLATPYSSSTPAAAAAGSTAANPLARFSVEPAVSRRQQQLPARQFVGGKVPLGL
KRKGLRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNLFTGRKENVVHHFGNPNFEMIRHD
VVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRINARFLLTSTSE
VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGP
RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLG
NPGEFTMLELAKVVQDTIDPNAKIEFRPNTQDDPHKRKPDIGRAKELLGWEPKIPLHKGL
PLMVTDFRKRIFGDQDSTATTTGGQQG

Transcript Sequence

Transcript ID

Os05t0363200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:17343645:17347620:-1 gene:Os05g0363200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-xylose synthase 5, UDP-glucuronic acid decarboxylase 5 description:UDP-glucuronic acid decarboxylase. (Os05t0363200-01)
Sequence

CCCCGCGCCCCCTTCTCCCTCCCCACCTGCCCGCATTTTGCATCCAGGTCCCCGGGGAAA
TTTTTATTTGCGGGGAGGGCCTTGGGGGGTTTGTGGAAATTTTACATCCAGGTCCCTCGC
CGTCGTCGTGAGGGAAAAAGAAAAAGAAAAAAAGATGGCGTCGGAGCTGACCTACCGCGG
CGGCGGCGGCGCGACGCTGGCCGGCGAGGCGGAGGCGGCGGTAGCGGCGGGGGGGTACTC
CCCGAAGCCGTCCAAGCCGCTCGCGTGGCTCCCCCGCGCCGCCCGGTACGCCGCCGGCGA
GCACCGCCCGCTCTTCGCCCTCGCCGGGATGCTCGTCGCCGCTGCCATCTTCTCCCTCGC
CACCCCGTACTCCTCCTCCACCCCCGCCGCCGCGGCCGCCGGTTCAACCGCGGCGAACCC
GCTGGCGCGGTTCTCGGTGGAGCCGGCGGTGAGCCGGCGGCAGCAGCAGCTGCCGGCGAG
GCAGTTCGTGGGCGGGAAGGTGCCGCTGGGGCTGAAGCGGAAGGGGCTCCGGGTGCTGGT
GACCGGCGGCGCCGGGTTCGTGGGGAGCCACCTGGTGGACCGGCTGGTGGAGCGCGGCGA
CAGCGTGATCGTGGTGGACAACCTGTTCACGGGGCGGAAGGAGAACGTGGTGCACCACTT
CGGCAACCCAAACTTCGAGATGATCCGCCACGACGTCGTCGAGCCCATCCTCCTCGAGGT
CGACCAGATCTACCACCTCGCCTGCCCCGCTTCCCCCGTTCACTACAAGTACAACCCCGT
CAAGACAATCAAGACCAATGTGGTTGGGACTCTCAACATGCTCGGATTGGCGAAGAGGAT
CAATGCCAGGTTCCTCCTCACCAGCACCAGTGAGGTCTACGGTGATCCCCTGCAGCATCC
TCAAGTGGAGACTTACTGGGGCAATGTCAACCCCATTGGTGTGAGGAGTTGTTACGATGA
GGGCAAGCGCACAGCTGAAACTTTGACCATGGACTATCACCGTGGTGCCAACCTTGAGGT
TAGGATCGCTCGTATCTTCAACACATATGGCCCTCGCATGTGCATCGATGATGGCCGTGT
TGTCAGCAACTTTGTTGCTCAGGCTTTGAGGAAGGAGCCTTTGACGGTTTACGGTGATGG
CAAGCAGACCAGGAGTTTCCAATATGTCTCTGATCTGGTTGAGGGATTGATGAGGCTCAT
GGAAGGTGAGCACGTAGGGCCATTCAACCTGGGTAACCCTGGTGAGTTCACCATGCTGGA
GCTGGCCAAGGTTGTCCAGGACACCATCGACCCTAACGCAAAGATCGAGTTCCGTCCCAA
CACCCAGGACGACCCGCACAAGCGCAAGCCTGACATCGGCCGTGCCAAGGAGCTCCTTGG
GTGGGAGCCAAAGATCCCTCTCCACAAGGGTCTTCCCCTCATGGTCACCGACTTCCGCAA
GCGCATTTTCGGTGACCAAGACAGCACCGCCACAACCACCGGAGGCCAACAAGGGTAGAA
GGAGGAGGAGGCATAAGACTCTGGAAATTTTGATGGCCTGCTTTCTAGCTGCTTGGTTAA
GCTCCTTACTGACAAAAGGCATGGCCTCATAGTTAGTTCCTCTGGAGCTGTTTGTTACTA
AAAATACCTTGGTTGATGATGCTGCTGCTGCTGCCTGTGATGTCATTCTTTTTTCTTGTA
ATTTTTTCTTCCTCCTCTCAGTCTCTCTCATCTATACGAAACTTCAGTTGG