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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0362300-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:17305652:17306580:1 gene:Os05g0362300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os05t0362300-01)
Sequence

ATGCCTCGCGTGCCTCTCCCCCTCCTCCTCCTCGTAGCCCTCCTCGTCGCCGGCGGCGGC
GGCGCCGCGGCGGAGACGAAGCCGACGGCGTACGAGGCGCTGGCGACGTTCGACTTCCCG
CCGGGGATTCTCCCCAAGGGGGTGGTCTCCTACACCCTCGACGACGCCACCGGCGACTTC
ACCGCCACGCTCAACACCACCTCCACCTGCGCCTTCTCCATCCAGGGCTCCTACTCCCTC
CGGTACCAGCGCCGGCTCTCCGGCCGCATCGCCGCCGACCGCCTCACCAACCTCCAGGGC
GTCTCCGTCAAGATCCTCTTCCTGTGGGTCAACATCGTCGAGGTCACCCGCCACGGCGAC
GAGCTCGGCTTCTCCGTCGGCATCGCCTCCGCCGACTTCGGCATCGACAACTTCCTCGAG
TCCCCGCAGTGCGGCTGCGGCTTCGACTGCCACGACCACCGCGATCTGTCGCTGCCGCTT
CCGCTGCCGGAGCCCAGCCTGCGGCTGCGAGGTGCGTTCTAG

Peptide Sequence

PEP ID

Os05t0362300-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:17305652:17306580:1 gene:Os05g0362300 transcript:Os05t0362300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os05t0362300-01)
Sequence

MPRVPLPLLLLVALLVAGGGGAAAETKPTAYEALATFDFPPGILPKGVVSYTLDDATGDF
TATLNTTSTCAFSIQGSYSLRYQRRLSGRIAADRLTNLQGVSVKILFLWVNIVEVTRHGD
ELGFSVGIASADFGIDNFLESPQCGCGFDCHDHRDLSLPLPLPEPSLRLRGAF

Transcript Sequence

Transcript ID

Os05t0362300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:17305652:17306580:1 gene:Os05g0362300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os05t0362300-01)
Sequence

CTCTTCTCCCAACTCTCCACTCCCGCACCGCACGCACACGAAACCGATTTCCCTCCGCCG
CAACCGGAGCTCACCTCACCTCGCCGGAGAAGATCCGCCATGCCTCGCGTGCCTCTCCCC
CTCCTCCTCCTCGTAGCCCTCCTCGTCGCCGGCGGCGGCGGCGCCGCGGCGGAGACGAAG
CCGACGGCGTACGAGGCGCTGGCGACGTTCGACTTCCCGCCGGGGATTCTCCCCAAGGGG
GTGGTCTCCTACACCCTCGACGACGCCACCGGCGACTTCACCGCCACGCTCAACACCACC
TCCACCTGCGCCTTCTCCATCCAGGGCTCCTACTCCCTCCGGTACCAGCGCCGGCTCTCC
GGCCGCATCGCCGCCGACCGCCTCACCAACCTCCAGGGCGTCTCCGTCAAGATCCTCTTC
CTGTGGGTCAACATCGTCGAGGTCACCCGCCACGGCGACGAGCTCGGCTTCTCCGTCGGC
ATCGCCTCCGCCGACTTCGGCATCGACAACTTCCTCGAGTCCCCGCAGTGCGGCTGCGGC
TTCGACTGCCACGACCACCGCGATCTGTCGCTGCCGCTTCCGCTGCCGGAGCCCAGCCTG
CGGCTGCGAGGTGCGTTCTAGAATCCTCCTCCTCCTCGATCCTTGGAGGTTGCTGCTCTA
AAGCAATTCTTGGATAAATGCTGTTGGTGTGAGCTGCAAGATCCAAATCTATCTTTAGAT
GGGTTAATAAACAAGAATTGGTAGATCCCCAACTTTTTGATGGGATAGGAAATTCAGAGC
TCGATTTCGTATGTTTCTGCACTGTTTCAGACAGTTTAGAGAGAATCACAGGAGAAAGTA
AGATCAGCTGAATTTTCTTGTATGCAAATTCTTTGGGAACTATACCGAGAAAAAAAAATA
ACTCAATGGAATTATGTTCTTTAGCTTGT