Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0361500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:17237008:17240099:1 gene:Os05g0361500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 17 description:Similar to Pectinesterase. (Os05t0361500-01)
Sequence	ATGGCGGTTCGCTACGAGAAGAAGGCGATGTGCGCGCTGCTGCTCTCGCTGATCATGGTG GCGCTCTCGGTGGCCGCCGCCGGCGACGGCGACGCGCCGCCGTCCACGCCGGTGTCGCCG ACGACGGCTTGCAACGACACGACGGACCCCAGCTTCTGCCGGACCGTGCTGCCGCCGCGC GGGTCCAGCGACCTCTACACCTACGGCCGCTTCTCGGTGGCCCGGTCGCTGGACTCCGCC CGGAGGTTCGCCGGCCTCGTCGGCCGCTACCTCGCCCGCCACCGCGGCCTGTCGCCGGCG GCCGTCGGCGCGCTGCGCGACTGCCAGCTCATGTCGGAGCTCAACGTCGACTTCCTCTCC GCCGCCGGCGCCACGCTGAGGAGCGCCGCCGACGCGCTGCCCGACCCGCAGGCCGACGAC GTGCACACGCTGCTGTCGGCGATCCTCACCAACCAGCAGACCTGCCTCGACGGCCTCCAG GCCGCGTCGTCGTCGTGGTCGGAGCGCGGCGGCGGCGGCCTCGCCGCGCCCATCGCCAAC GGCACCAAGCTCTACAGCCTCTCGCTCTCCCTCTTCACCAGGGCGTGGGTGCCCACGGCG AAGGGGTCCAAGCACCACGGCGGCGGCAAGAAGCCTCACCAAGGCCACGGCAAGAAGCAG CCGCCGGCGGCGGCGGCGAGCATGAGGAGGGGGCTGTTCGACGCGGCCGACGGCGAGATG GCGCGGCGGGTGGCGATGGAGGGGCCGGAGGCGACGGTGGCGGTGAACGGGGTGGTGACG GTGGACCAGGGCGGCGGCGGGAACTACACGACGGTGGGTGACGCGGTGGCGGCGGCGCCG AGCAACCTGGACGGCAGCACGGGGCACTACGTGATCTACGTGGCGGGCGGCGTGTACGAG GAGAACGTGGTGGTGCCCAAGCACAAGAGGTACATCATGATGGTCGGCGACGGCGTCGGC CAGACGGTCATCACCGGCAACCGGAGCGTCGTCGATGGCTGGACCACTTTTAACTCCGCC ACCTTCGCTGTGGTGGGGCAAGGGTTCGTGGCGATGAACATGACGTTCCGGAACACGGCG GGGCCGTCGAAGCACCAGGCGGTGGCGCTCCGGTCCGGCGCCGACCTGTCGGCGTTCTAC GGGTGCAGCTTCGAGGCGTACCAGGACACCCTCTACGCCCACTCCCTCCGCCAGTTCTAC CGCCGCTGCGACGTCTACGGCACCGTCGACTACGTCTTCGGCAACGCCGCTGTCGTCTTC CAGTCCTGCGCCTTCCTCTCCCGCCTCCCGCTCCCCGGCCAGTGCAACACCGTCACGGCG CAGGGCCGATCCGACCCCAACCAGAACACCGGCACCTCCATCCAGGGCTGCTCCCTCCTC GCCGCCCCGGACCTCGCCGCCGCCGGCGACGGCGGCCGGACGCTCACCTACCTCGGCCGG CCGTGGAAGAACTTCTCCAGGACGGTGGTCATGGAGTCCTACGTCGGCGGCCTCGTCGAC CCGGCCGGGTGGATGCCGTGGTCCGGCGACTTCGCGCTCGACACGCTCTTCTACGCCGAG TACAACAACTCCGGCCCCGGCGCCGACACCAGCCGCCGCGTCGCCTGGCCGGGCTACCAC GTCCTCGGCGCCGGCGCCGACGCCGGCAACTTCACCGTCACCAGCATGGTGCTCGGCGAC AACTGGCTGCCCCAGACCGGCGTCCCCTTCACCAGCGGCTTCCTCACTTCCGATCCACCT ATTAGCTAA

Peptide Sequence

PEP ID	Os05t0361500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:17237008:17240099:1 gene:Os05g0361500 transcript:Os05t0361500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 17 description:Similar to Pectinesterase. (Os05t0361500-01)
Sequence	MAVRYEKKAMCALLLSLIMVALSVAAAGDGDAPPSTPVSPTTACNDTTDPSFCRTVLPPR GSSDLYTYGRFSVARSLDSARRFAGLVGRYLARHRGLSPAAVGALRDCQLMSELNVDFLS AAGATLRSAADALPDPQADDVHTLLSAILTNQQTCLDGLQAASSSWSERGGGGLAAPIAN GTKLYSLSLSLFTRAWVPTAKGSKHHGGGKKPHQGHGKKQPPAAAASMRRGLFDAADGEM ARRVAMEGPEATVAVNGVVTVDQGGGGNYTTVGDAVAAAPSNLDGSTGHYVIYVAGGVYE ENVVVPKHKRYIMMVGDGVGQTVITGNRSVVDGWTTFNSATFAVVGQGFVAMNMTFRNTA GPSKHQAVALRSGADLSAFYGCSFEAYQDTLYAHSLRQFYRRCDVYGTVDYVFGNAAVVF QSCAFLSRLPLPGQCNTVTAQGRSDPNQNTGTSIQGCSLLAAPDLAAAGDGGRTLTYLGR PWKNFSRTVVMESYVGGLVDPAGWMPWSGDFALDTLFYAEYNNSGPGADTSRRVAWPGYH VLGAGADAGNFTVTSMVLGDNWLPQTGVPFTSGFLTSDPPIS

Transcript Sequence

Transcript ID	Os05t0361500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:17237008:17240099:1 gene:Os05g0361500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 17 description:Similar to Pectinesterase. (Os05t0361500-01)
Sequence	CACTCACCCACATCACACGCTGCGACGACAGCATTGCGAGCTATAGCTAAGCTAGTAGCT GCAATGGCGGTTCGCTACGAGAAGAAGGCGATGTGCGCGCTGCTGCTCTCGCTGATCATG GTGGCGCTCTCGGTGGCCGCCGCCGGCGACGGCGACGCGCCGCCGTCCACGCCGGTGTCG CCGACGACGGCTTGCAACGACACGACGGACCCCAGCTTCTGCCGGACCGTGCTGCCGCCG CGCGGGTCCAGCGACCTCTACACCTACGGCCGCTTCTCGGTGGCCCGGTCGCTGGACTCC GCCCGGAGGTTCGCCGGCCTCGTCGGCCGCTACCTCGCCCGCCACCGCGGCCTGTCGCCG GCGGCCGTCGGCGCGCTGCGCGACTGCCAGCTCATGTCGGAGCTCAACGTCGACTTCCTC TCCGCCGCCGGCGCCACGCTGAGGAGCGCCGCCGACGCGCTGCCCGACCCGCAGGCCGAC GACGTGCACACGCTGCTGTCGGCGATCCTCACCAACCAGCAGACCTGCCTCGACGGCCTC CAGGCCGCGTCGTCGTCGTGGTCGGAGCGCGGCGGCGGCGGCCTCGCCGCGCCCATCGCC AACGGCACCAAGCTCTACAGCCTCTCGCTCTCCCTCTTCACCAGGGCGTGGGTGCCCACG GCGAAGGGGTCCAAGCACCACGGCGGCGGCAAGAAGCCTCACCAAGGCCACGGCAAGAAG CAGCCGCCGGCGGCGGCGGCGAGCATGAGGAGGGGGCTGTTCGACGCGGCCGACGGCGAG ATGGCGCGGCGGGTGGCGATGGAGGGGCCGGAGGCGACGGTGGCGGTGAACGGGGTGGTG ACGGTGGACCAGGGCGGCGGCGGGAACTACACGACGGTGGGTGACGCGGTGGCGGCGGCG CCGAGCAACCTGGACGGCAGCACGGGGCACTACGTGATCTACGTGGCGGGCGGCGTGTAC GAGGAGAACGTGGTGGTGCCCAAGCACAAGAGGTACATCATGATGGTCGGCGACGGCGTC GGCCAGACGGTCATCACCGGCAACCGGAGCGTCGTCGATGGCTGGACCACTTTTAACTCC GCCACCTTCGCTGTGGTGGGGCAAGGGTTCGTGGCGATGAACATGACGTTCCGGAACACG GCGGGGCCGTCGAAGCACCAGGCGGTGGCGCTCCGGTCCGGCGCCGACCTGTCGGCGTTC TACGGGTGCAGCTTCGAGGCGTACCAGGACACCCTCTACGCCCACTCCCTCCGCCAGTTC TACCGCCGCTGCGACGTCTACGGCACCGTCGACTACGTCTTCGGCAACGCCGCTGTCGTC TTCCAGTCCTGCGCCTTCCTCTCCCGCCTCCCGCTCCCCGGCCAGTGCAACACCGTCACG GCGCAGGGCCGATCCGACCCCAACCAGAACACCGGCACCTCCATCCAGGGCTGCTCCCTC CTCGCCGCCCCGGACCTCGCCGCCGCCGGCGACGGCGGCCGGACGCTCACCTACCTCGGC CGGCCGTGGAAGAACTTCTCCAGGACGGTGGTCATGGAGTCCTACGTCGGCGGCCTCGTC GACCCGGCCGGGTGGATGCCGTGGTCCGGCGACTTCGCGCTCGACACGCTCTTCTACGCC GAGTACAACAACTCCGGCCCCGGCGCCGACACCAGCCGCCGCGTCGCCTGGCCGGGCTAC CACGTCCTCGGCGCCGGCGCCGACGCCGGCAACTTCACCGTCACCAGCATGGTGCTCGGC GACAACTGGCTGCCCCAGACCGGCGTCCCCTTCACCAGCGGCTTCCTCACTTCCGATCCA CCTATTAGCTAATGCATTATTTAATTAATTATATATATGATCATCTAAACCCATCTATTA ATAATTAATTAATTATAGAATGACAAACACATAATGTACTACTACTATTCGATCGATCTC GGTGTCGGCATTATTAGTTAGTTTACTTCTTATTTATTAGTT