Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0355900-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:16874881:16876813:1 gene:Os05g0355900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0355900-01)
Sequence

ATGGCAGTATTGCTCCATCCCTCTCCAAGAAGTGTCTGCTTGGCCTTTGCAATTGCAGTG
TGTCTTTTGCTCCCATGCTGCTTTGGTAGCAAAGCTGCCGTGGAAATGTTCGAGAAGGCT
TGCCATTGCTTCGACGATCACAACGTGTACAGCGAGTGCAAGGAGGAGCTTCGGCTGGGG
GTGGAGGGGGCGTTCCATGTGGGGAAGGAGAGCGTGGACGAGTACTGCGGTGGGCCGTGC
CTGATGGAGACGAAGATGGCGCTGCAGTGCGTGGAGGAGGTCGCCCACGACGGCTTCAGG
TTCTACAGCGGCGCCTCGCTGCCCGCGGTCAAGGCCGCGCTCGACACCGGCTGCAGCTAC
ACTCCTGACAGAGGGACGTTTGAGATTAGGGAGCGTAAGCAGTGCGGCGACGAGTACTAC
CACTACAGCCACCACGAGCAGACGACGGAGCAGCAATACGGTGGGTACTATGGCAGCGAG
GAGGGCGAATACCCAACTACGACTAGTACGCTTCCTGCTTCAGACTACTGCTACGGCGCC
GGCGCCAGCAGCCTAGGCCTTCGCTACAGCCTGCTGCAGATGCTCATGCTCTTCTCCGCT
TCTATGGTGCTTCTGCTGCTTGTAATATAA

Peptide Sequence

PEP ID

Os05t0355900-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:16874881:16876813:1 gene:Os05g0355900 transcript:Os05t0355900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0355900-01)
Sequence

MAVLLHPSPRSVCLAFAIAVCLLLPCCFGSKAAVEMFEKACHCFDDHNVYSECKEELRLG
VEGAFHVGKESVDEYCGGPCLMETKMALQCVEEVAHDGFRFYSGASLPAVKAALDTGCSY
TPDRGTFEIRERKQCGDEYYHYSHHEQTTEQQYGGYYGSEEGEYPTTTSTLPASDYCYGA
GASSLGLRYSLLQMLMLFSASMVLLLLVI

Transcript Sequence

Transcript ID

Os05t0355900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:16874881:16876813:1 gene:Os05g0355900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0355900-01)
Sequence

GAAATGCAGCGGCACTAGCCTAAATTACATCTCTGCTCAACTACAACGATCACCTTCTCC
CGAATTAACTCAGCAATATGGCAGTATTGCTCCATCCCTCTCCAAGAAGTGTCTGCTTGG
CCTTTGCAATTGCAGTGTGTCTTTTGCTCCCATGCTGCTTTGGTAGCAAAGCTGCCGTGG
AAATGTTCGAGAAGGCTTGCCATTGCTTCGACGATCACAACGTGTACAGCGAGTGCAAGG
AGGAGCTTCGGCTGGGGGTGGAGGGGGCGTTCCATGTGGGGAAGGAGAGCGTGGACGAGT
ACTGCGGTGGGCCGTGCCTGATGGAGACGAAGATGGCGCTGCAGTGCGTGGAGGAGGTCG
CCCACGACGGCTTCAGGTTCTACAGCGGCGCCTCGCTGCCCGCGGTCAAGGCCGCGCTCG
ACACCGGCTGCAGCTACACTCCTGACAGAGGGACGTTTGAGATTAGGGAGCGTAAGCAGT
GCGGCGACGAGTACTACCACTACAGCCACCACGAGCAGACGACGGAGCAGCAATACGGTG
GGTACTATGGCAGCGAGGAGGGCGAATACCCAACTACGACTAGTACGCTTCCTGCTTCAG
ACTACTGCTACGGCGCCGGCGCCAGCAGCCTAGGCCTTCGCTACAGCCTGCTGCAGATGC
TCATGCTCTTCTCCGCTTCTATGGTGCTTCTGCTGCTTGTAATATAAGGAATACAATACT
CCGATACAGTTCATCGTTTTATATCTATACTTTTTACTATTTTTTAGAATATGTAAAAGG
ATTACGCACTTTTGTATTAAGAGGTATAAAATTTATAC