Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0354400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:16781887:16786652:-1 gene:Os05g0354400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 13 description:Similar to ESK1 (ESKIMO 1). (Os05t0354400-01);Similar to ESK1 (ESKIMO 1). (Os05t0354400-02)
Sequence	ATGCGGATCCCGCGGAGGAAGGGCGGGGCGGGGCCGCTGGTGGGGGCGCCGAGCAGGAGG GCGCAGGTGGCGGCGGTGTTCGCGCTCGCGCTGCTGCTCGGTGTCTCCGTGCTCTACGAC AGCGCCCACATCGCCGCCTCGCTCCGCCGCCACGGCGTCGGCGGCGGCGGGAGTAGCGGC GGCGGAGGAGGAGGAGGAGGAGACGGCGCCCGCGCCTACACAAACACCAAGCTCTCCGCC ACGACGGAGGAGGCGGAGGCGGAGGCGGCCGAGGTGCGCTCCCCACCGGCGCAGGGGGTC GAATCGGCGGTGGAGGCGACGGATCGGGGCGAGGCTCCACCGGAGCAGCCGGTGGCCGCG GACTCCGGAGCGTCGTCAGCCGAGACCCCGCCGTCTCTGCTGGAGCAGGTGACGGAGACG CCGCCGCCGTCGCCGTCGTCGTCGTCGGCGGCGGCGGCGGCGGCGGAGGCGCAGGTGGGA GGGGATCACGGTGGCGAGAGCTGCGACGTGTACAAGGGGAGGTGGGTGTACGACGAGGCG AACGCGCCGCTGTACAAGGAGTCCGCCTGCGAGTTCCTCACCGAGCAGGTCACCTGCATG CGCAACGGCCGCCGCGACGACGACTACCAGAAATGGCGGTGGCAGCCCGACGGCTGCGAC CTCCCCAGATTTGACGCTAAGTTGCTCCTGGAGAAACTGAGGAACAAACGACTGATGTTT GTGGGGGATTCGCTGAATCGGAACCAATGGGAGTCCATGGTGTGCCTTGTCCAATCTGAG GCTCCCTGGGAGAAGAAATCACTTGTCAAGAATGACTCTCTAAATGTCTTCCGCCTTGAG GAGTACAATGCTACTATCGAGTTCTATTGGTCACCTTTTCTAGTTGAGTCAAACTCAGAT GATCCAAACATGCATAGCATCGTTGACCGCATAATCAAGCCAACATCAATTGCAAAACAT GCAGCGAATTGGGAAGGGGTGGACTACTTGATTTTCAACACTTATATTTGGTGGATGAAT ACACCAGAGATGAAAATTTTACATGGTGGGTCCTTTTCAAAGAAACCAGTGAAATACGAT GAAATGGAACGTGTAGCTGCATACCGGAAGGTCCTCAAGACATGGTCTAGATGGGTAGAA AAGCATGTAGATCCGAAAAGAAGTACAGTCTTCTTCATGAGTGTCTCACCTGTGCATATG CAGAGCGAGGGCTGGGGAAAACCAGATGCCATAAAATGCTTCTCTGAGACGCAGCCAGCT ATCAATTACACAAAGAAATTGGAGGTGGGCACGGACTGGGATCTGTTCTCGACAGCTCAT CACGTAACGAAGGCTATGAAGAGGGTGCCAGTGCACTTCATCAACATAACGGCGTTGTCA GAGATCCGCAAGGACGCGCACACATCGGTGAACACCCTGCGGCAGGGGAAGCTCCTGACG AAGGAGCAGAAGGCGAACCCCCGCAAGTTCGCGGACTGCATCCACTGGTGCCTACCTGGG TTGCCAGACACATGGAACGAGTTCATTTACGGTCACATCGTCTCGAGCCCTCAAAGGAGG CCGGTTGAGCCGATTGAGAATCAACCTCAGAGATAA

Peptide Sequence

PEP ID	Os05t0354400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:16781887:16786652:-1 gene:Os05g0354400 transcript:Os05t0354400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 13 description:Similar to ESK1 (ESKIMO 1). (Os05t0354400-01);Similar to ESK1 (ESKIMO 1). (Os05t0354400-02)
Sequence	MRIPRRKGGAGPLVGAPSRRAQVAAVFALALLLGVSVLYDSAHIAASLRRHGVGGGGSSG GGGGGGGDGARAYTNTKLSATTEEAEAEAAEVRSPPAQGVESAVEATDRGEAPPEQPVAA DSGASSAETPPSLLEQVTETPPPSPSSSSAAAAAAEAQVGGDHGGESCDVYKGRWVYDEA NAPLYKESACEFLTEQVTCMRNGRRDDDYQKWRWQPDGCDLPRFDAKLLLEKLRNKRLMF VGDSLNRNQWESMVCLVQSEAPWEKKSLVKNDSLNVFRLEEYNATIEFYWSPFLVESNSD DPNMHSIVDRIIKPTSIAKHAANWEGVDYLIFNTYIWWMNTPEMKILHGGSFSKKPVKYD EMERVAAYRKVLKTWSRWVEKHVDPKRSTVFFMSVSPVHMQSEGWGKPDAIKCFSETQPA INYTKKLEVGTDWDLFSTAHHVTKAMKRVPVHFINITALSEIRKDAHTSVNTLRQGKLLT KEQKANPRKFADCIHWCLPGLPDTWNEFIYGHIVSSPQRRPVEPIENQPQR

Transcript Sequence

Transcript ID	Os05t0354400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:16781887:16786652:-1 gene:Os05g0354400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 13 description:Similar to ESK1 (ESKIMO 1). (Os05t0354400-01);Similar to ESK1 (ESKIMO 1). (Os05t0354400-02)
Sequence	ATCCGCTCCTCCTCTCCTCTCGCTCCGCTTCCCAAAAAAAAAAGACGAGAGAGAGAAAAA AAGTTCTCCACGAGGAAGTAGTAGTAGCGAGACGAGAGGAGAGGAGGGAGCTTGAGGAGG AAGTAGGCGGCGGCGAGGTCTCGAGCTGCGGCCTGCGGCGCGGGTGGTAGCTTCGCGGCG GCGGCGGAGGAGGGGGAGGATGCGGATCCCGCGGAGGAAGGGCGGGGCGGGGCCGCTGGT GGGGGCGCCGAGCAGGAGGGCGCAGGTGGCGGCGGTGTTCGCGCTCGCGCTGCTGCTCGG TGTCTCCGTGCTCTACGACAGCGCCCACATCGCCGCCTCGCTCCGCCGCCACGGCGTCGG CGGCGGCGGGAGTAGCGGCGGCGGAGGAGGAGGAGGAGGAGACGGCGCCCGCGCCTACAC AAACACCAAGCTCTCCGCCACGACGGAGGAGGCGGAGGCGGAGGCGGCCGAGGTGCGCTC CCCACCGGCGCAGGGGGTCGAATCGGCGGTGGAGGCGACGGATCGGGGCGAGGCTCCACC GGAGCAGCCGGTGGCCGCGGACTCCGGAGCGTCGTCAGCCGAGACCCCGCCGTCTCTGCT GGAGCAGGTGACGGAGACGCCGCCGCCGTCGCCGTCGTCGTCGTCGGCGGCGGCGGCGGC GGCGGAGGCGCAGGTGGGAGGGGATCACGGTGGCGAGAGCTGCGACGTGTACAAGGGGAG GTGGGTGTACGACGAGGCGAACGCGCCGCTGTACAAGGAGTCCGCCTGCGAGTTCCTCAC CGAGCAGGTCACCTGCATGCGCAACGGCCGCCGCGACGACGACTACCAGAAATGGCGGTG GCAGCCCGACGGCTGCGACCTCCCCAGATTTGACGCTAAGTTGCTCCTGGAGAAACTGAG GAACAAACGACTGATGTTTGTGGGGGATTCGCTGAATCGGAACCAATGGGAGTCCATGGT GTGCCTTGTCCAATCTGAGGCTCCCTGGGAGAAGAAATCACTTGTCAAGAATGACTCTCT AAATGTCTTCCGCCTTGAGGAGTACAATGCTACTATCGAGTTCTATTGGTCACCTTTTCT AGTTGAGTCAAACTCAGATGATCCAAACATGCATAGCATCGTTGACCGCATAATCAAGCC AACATCAATTGCAAAACATGCAGCGAATTGGGAAGGGGTGGACTACTTGATTTTCAACAC TTATATTTGGTGGATGAATACACCAGAGATGAAAATTTTACATGGTGGGTCCTTTTCAAA GAAACCAGTGAAATACGATGAAATGGAACGTGTAGCTGCATACCGGAAGGTCCTCAAGAC ATGGTCTAGATGGGTAGAAAAGCATGTAGATCCGAAAAGAAGTACAGTCTTCTTCATGAG TGTCTCACCTGTGCATATGCAGAGCGAGGGCTGGGGAAAACCAGATGCCATAAAATGCTT CTCTGAGACGCAGCCAGCTATCAATTACACAAAGAAATTGGAGGTGGGCACGGACTGGGA TCTGTTCTCGACAGCTCATCACGTAACGAAGGCTATGAAGAGGGTGCCAGTGCACTTCAT CAACATAACGGCGTTGTCAGAGATCCGCAAGGACGCGCACACATCGGTGAACACCCTGCG GCAGGGGAAGCTCCTGACGAAGGAGCAGAAGGCGAACCCCCGCAAGTTCGCGGACTGCAT CCACTGGTGCCTACCTGGGTTGCCAGACACATGGAACGAGTTCATTTACGGTCACATCGT CTCGAGCCCTCAAAGGAGGCCGGTTGAGCCGATTGAGAATCAACCTCAGAGATAACAGTG AAGAATTTGTCTATTTGGAATCCATTAGATCGTTTAGCGAGGAAGAAGTGGCGGCCGAGG CCATAAATTATTTTCTAGGTTTAGGAATCTATGCTGTTGATTCACCTAGGGTTTAAACAG AATGGTGGCCATGGGGTAGAGAAATGTAGCTGTAAGCAACCAAGATAGCCCTAGACGAGA GCTCTGATGCTGTCTGAGAGTTTGAATGCGGTTGTTTCTGAGGAGAATGCTTTCTCTGCT TCCCGTCCAAAAAAGGTGAGTGTATTTCCATGGATGCATGTATATAATCTTACTAAATTC TTTTGGGGAATTGTTTTCGGTTTGTCCCGTGGACAATTTTCTTGAACTGTCGCAAACGTT CCAGTAAAGCTGCAACAGTCAATATACAAATTGGCTGTTGCCTTGTGATTC