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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0352800-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:16672595:16678145:-1 gene:Os05g0352800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0352800-01)
Sequence

ATGGCCGCGCACAACACATCTATGACATGTGAGGGTGACTATGAGACTGAACAGAAAAAG
CAAGCCGCTGCAGATGTCCTTTTCCACTATTCACAGTTTATTATGGTTTGCATTGGTGAG
GGTGTTCGCCCAACTGATCTGAGGTTGCATCTTATGAAGGAAGTTTCAGGAATGGCCACT
TCTCTAACGAAAGAGCCACAGCAAGCAGCTGCCTCTCCGGATTCTAGTGAACCATCTTCT
TCAGGGACAACGAAATGA

Peptide Sequence

PEP ID

Os05t0352800-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:16672595:16678145:-1 gene:Os05g0352800 transcript:Os05t0352800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0352800-01)
Sequence

MAAHNTSMTCEGDYETEQKKQAAADVLFHYSQFIMVCIGEGVRPTDLRLHLMKEVSGMAT
SLTKEPQQAAASPDSSEPSSSGTTK

Transcript Sequence

Transcript ID

Os05t0352800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:16672595:16678145:-1 gene:Os05g0352800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0352800-01)
Sequence

TCCGCCTCCCCAATCCGTCCCGTCTCCTCGCCCTCCGCCCTCGACTCCCGTCTCCTCGCC
TGCCGCTGGCGCCGATCTCCATCCTGCTAGCAGAGGTGGCGCCGGCGTCCTTCTGCTCCC
GCCGCATTCGCTCACCGGTGAGCATCCTAATCCATCCCATCCGGCCTCGGCCTCGAATTT
CGTCTCCTCGCCCGCCGCTTGCGCCGATCCCCATCCTGCGAGCAGAGGTGGCGCCCGGCG
TCCTCCTCCTTCCACCGCATCGTCGCTCGCCGAATAAGATAATACATAAAGAATGGCCGC
GCACAACACATCTATGACATGTGAGGGTGACTATGAGACTGAACAGAAAAAGCAAGCCGC
TGCAGATGTCCTTTTCCACTATTCACAGTTTATTATGGTTTGCATTGGTGAGGGTGTTCG
CCCAACTGATCTGAGGTTGCATCTTATGAAGGAAGTTTCAGGAATGGCCACTTCTCTAAC
GAAAGAGCCACAGCAAGCAGCTGCCTCTCCGGATTCTAGTGAACCATCTTCTTCAGGGAC
AACGAAATGAGACACGAATGAGATCTTCTAAGCTTCTTCAAGAAGTATGATAGGAAATAT
TGCAAACTAGTAGGTTCACAGCTTGTGGTCTGAGAACTGTTTCTGGTGCAGTGATAGGAA
GTATTGATGATGATATACTTGTGTTGGTGATGCTTCTTATGAGCACTTGATTTGAATAAA
TTAAATGTAAATACTTTAGTATGTTTGGCCCACAATTTGTAATGAAGGAACATGGATCGT
GATGTTTCTGATAAAATTCTTGAAGTGCCTAGCCCGCGTTCATGTTT