Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0349500-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:16502945:16506613:-1 gene:Os05g0349500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology-type domain containing protein. (Os05t0349500-01)
Sequence

ATGGCAGACGAGGAGCATGCTCCAACGTCTAGGAAGAGGGTTGCAGGTACCCAAATCAAC
AAGGATAATCCTGAGCCTGATGATGACTCAACTGAGCAAGAGATGGGGACATTTAAGAGA
GCTAGTGAGGAAGTGATGGCAACACGGAGAATTGTAAAGGTTCGACGCCAGCAGCCCTCA
TCAGCTCCTTCTAATCCTTTCTCTGCAATCAGATTTACCCCCAGTGATACCAGCGCCCAA
GCAACTATCCCTGTCTCAGAGCCTCAACCTTCTGATGTCATTACAGCGAATGCAAAGGAT
AGTTCAAGTGAGAAAGCTGATGAGGGAAGCAATGGCAGTGGGAAAGATGCTTTACCTGTA
ACTGACAAGAGTGCAGGTTCTAGTGAGGTAGCTGAGACAGAAAAGGATGGATCAGATCTG
AAAGGATCAGATGAAAAAGCCAAGTCCAGTGACTCAATTGAACCACCTTCTCAACCTGTT
GAGACCACTGACGAAGCAAAAGACTTGGGGGGCGGATCAGTGGTAGCTGGAGAGGCCAAG
GAAGATAACAGCAAGGCATCTGATATCGAGGACAAAACAGCAAAAGAGGGAGATGCTGAA
GAAGAGGATGGAGCAAATGAGGCTGGAGCTGAAGACAAAATTAGCAAGGGTGATGATGAG
AAGAAAGATGGAGATGAATCAGAGACAAAGGATGGATCGTCTGAGGAGCAGAAGGATGCT
GATAACAAGGGGCAGTCGTCATCACCAACACCCCTTTTCTCTTTCAAGAACCTGTCGAGT
GGCCAAAATGCCTTCACAGGACTGGCTGGAACTGGATTTTCAGGCTCTTCATTTTCATTT
GGATCAGGCTCTAAAGAAAGCTCGAGTGCTCCCCTGTTTGGGCTAAAGACTGATGGCTCA
TCATTCCCATCTTTTAGTATTGGTGCTTCGAATAATGGGAGTTCCTCCCCTGCGCTTGCG
ACTTCGGCAGAAGCTCCCAAGAAATTTGCTATGCCAGAGGGCCCAGTTGAAACTGGTGAA
GAGAATGAGAAGGCCATATTCACAGCCGACTCAGCATTGTATGAATACTTGGATGGGGGT
TGGAAAGAAAGAGGAAAGGGGGAACTAAAGTTGAACATCCCAGTATCTGGTGGCGAGAGG
TCTCGTCTCGTCATGAGAACCAAGGGCAATTACAGGCTAGTTCTTAACGCAAGCCTTTAC
GAGGACATGTCGCTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCCTGTATGAACAGC
ATCGGCGACTCGCAGAGCGGGCTTGCCACATTTGCTCTGAAGTTCAGGGATACCAGCATC
AGGGAGGAGTTCAAAGCTGCGGTGGAGATGCACAAGGCGAAAAAGGCGTCCGGCACACTC
AAGACACCCGAGAACTCCCCGAAGGCATCAGATGATTGA

Peptide Sequence

PEP ID

Os05t0349500-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:16502945:16506613:-1 gene:Os05g0349500 transcript:Os05t0349500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology-type domain containing protein. (Os05t0349500-01)
Sequence

MADEEHAPTSRKRVAGTQINKDNPEPDDDSTEQEMGTFKRASEEVMATRRIVKVRRQQPS
SAPSNPFSAIRFTPSDTSAQATIPVSEPQPSDVITANAKDSSSEKADEGSNGSGKDALPV
TDKSAGSSEVAETEKDGSDLKGSDEKAKSSDSIEPPSQPVETTDEAKDLGGGSVVAGEAK
EDNSKASDIEDKTAKEGDAEEEDGANEAGAEDKISKGDDEKKDGDESETKDGSSEEQKDA
DNKGQSSSPTPLFSFKNLSSGQNAFTGLAGTGFSGSSFSFGSGSKESSSAPLFGLKTDGS
SFPSFSIGASNNGSSSPALATSAEAPKKFAMPEGPVETGEENEKAIFTADSALYEYLDGG
WKERGKGELKLNIPVSGGERSRLVMRTKGNYRLVLNASLYEDMSLKDMDKKGVTFACMNS
IGDSQSGLATFALKFRDTSIREEFKAAVEMHKAKKASGTLKTPENSPKASDD

Transcript Sequence

Transcript ID

Os05t0349500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:16502945:16506613:-1 gene:Os05g0349500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology-type domain containing protein. (Os05t0349500-01)
Sequence

AGATCTGTACTCCGGAGGCGAAGGGTCGGAGCCACTCGCTACTTGCCGCCGCCGCCGCCG
CCGCCGTCGTCGAGGGCGAGGCAGCGGCGCTCCGCCTCGGCTCGGGCGGCGCACCGGCGC
CTCTGAGCGGCCACGCCCCGGTCTCCGCCATCCGCCCGTCCGCCTCTCCGTTCGACCTCG
TCCCGTGGTCCCTCCCTACGCCGCCGTCGACCGCCGTTTCTGGTAATCTCAGGAACTTGA
AATGGCAGACGAGGAGCATGCTCCAACGTCTAGGAAGAGGGTTGCAGGTACCCAAATCAA
CAAGGATAATCCTGAGCCTGATGATGACTCAACTGAGCAAGAGATGGGGACATTTAAGAG
AGCTAGTGAGGAAGTGATGGCAACACGGAGAATTGTAAAGGTTCGACGCCAGCAGCCCTC
ATCAGCTCCTTCTAATCCTTTCTCTGCAATCAGATTTACCCCCAGTGATACCAGCGCCCA
AGCAACTATCCCTGTCTCAGAGCCTCAACCTTCTGATGTCATTACAGCGAATGCAAAGGA
TAGTTCAAGTGAGAAAGCTGATGAGGGAAGCAATGGCAGTGGGAAAGATGCTTTACCTGT
AACTGACAAGAGTGCAGGTTCTAGTGAGGTAGCTGAGACAGAAAAGGATGGATCAGATCT
GAAAGGATCAGATGAAAAAGCCAAGTCCAGTGACTCAATTGAACCACCTTCTCAACCTGT
TGAGACCACTGACGAAGCAAAAGACTTGGGGGGCGGATCAGTGGTAGCTGGAGAGGCCAA
GGAAGATAACAGCAAGGCATCTGATATCGAGGACAAAACAGCAAAAGAGGGAGATGCTGA
AGAAGAGGATGGAGCAAATGAGGCTGGAGCTGAAGACAAAATTAGCAAGGGTGATGATGA
GAAGAAAGATGGAGATGAATCAGAGACAAAGGATGGATCGTCTGAGGAGCAGAAGGATGC
TGATAACAAGGGGCAGTCGTCATCACCAACACCCCTTTTCTCTTTCAAGAACCTGTCGAG
TGGCCAAAATGCCTTCACAGGACTGGCTGGAACTGGATTTTCAGGCTCTTCATTTTCATT
TGGATCAGGCTCTAAAGAAAGCTCGAGTGCTCCCCTGTTTGGGCTAAAGACTGATGGCTC
ATCATTCCCATCTTTTAGTATTGGTGCTTCGAATAATGGGAGTTCCTCCCCTGCGCTTGC
GACTTCGGCAGAAGCTCCCAAGAAATTTGCTATGCCAGAGGGCCCAGTTGAAACTGGTGA
AGAGAATGAGAAGGCCATATTCACAGCCGACTCAGCATTGTATGAATACTTGGATGGGGG
TTGGAAAGAAAGAGGAAAGGGGGAACTAAAGTTGAACATCCCAGTATCTGGTGGCGAGAG
GTCTCGTCTCGTCATGAGAACCAAGGGCAATTACAGGCTAGTTCTTAACGCAAGCCTTTA
CGAGGACATGTCGCTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCCTGTATGAACAG
CATCGGCGACTCGCAGAGCGGGCTTGCCACATTTGCTCTGAAGTTCAGGGATACCAGCAT
CAGGGAGGAGTTCAAAGCTGCGGTGGAGATGCACAAGGCGAAAAAGGCGTCCGGCACACT
CAAGACACCCGAGAACTCCCCGAAGGCATCAGATGATTGAAGGTTGAAGCCCAACTCTCG
CCACAATGCACCGAGTCCATGAAGTGGAGGAGCTGAGATACGCTTCTTGTTCTTTTGGGG
GGGTTTATTTAAGTAACATACCGTACCATGTCACTACGCTGCCTTAAGATGATGATGCGC
TTGCATACGGTTTCCTGTCGCTGTTTTTGGAACAGTGGGTAGAGTCCTGTGAAACTTTAA
ATTAAAAGTCCTGAAATCTTAGTAAGTGGAGAGATGAGACTCCTATTGCCTACTGTGATG
ACCCCAGCGGACACTCACTAAGAGTATGCCGCTGAGTGTTTGATATTCTATTTGGGGATG
AGATCTTTATCAATCGGTGTTGTACTGGTGTATCATGTATCCGTGATCTGCAGCGTCAGC
GTCGCCTTACCTTTACCTTCTACTGTTGCTGATAATCTTTTCTTTGAGAAACTTTTTGCT
GATGATAATAAGAGTACCTTTTGTTGG