Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0346800-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:16327564:16328326:-1 gene:Os05g0346800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ASL5; DNA binding / protein binding. (Os05t0346800-00)
Sequence	ATAGATAGAGAGAGAGAGGGGATGGGCGGTGGGTCGCCGTGCGCGTCGTGCAAGCTGCTG CGGCGGCGGTGCACCAAGGACTGCATCTTCGCGCCCTTCTTCCCCGCCGACGACCCCCAC AAGTTCGCCATCGTCCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATGCTCCAGGAG CTGCCGGCGCAGCAGCGAGGCGACGCGGTAAGCAGCCTGGTGTACGAGGCGAACGCCCGG ATGCGGGACCCCGTCTACGGCTGCGTCGGGGCCATCTCCTTCCTCCAGAACCAGGTGTCG CAGCTGCAGATGCAGCTCGCCGTCGCGCAGGCCGAGATCCTCTGTATCCAGATGCAGCAC CGCGACGACGGCGCCGCCCACCAGCTGGACGCCGCCGCCGACCACCACCCGCTGCTGGAT CAGCAGCAGCAACAGCAGATGGTCGTGGACGCCGCCGACGCGGCCGCCTCCTTCCTCGTG CAGAACGGCGGCGGAGGCGGAGGCCCCGCGGCGCAGCTGATAAGCGGCTACGGCTCGCCG GCGGCCGGCGGCGGCGGTGGCCATGGCGTGGTGCACTACGCGGCGGCGCAGGAGCATCTC AAGAGGGAGTCGCTCTGGACGTAG

Peptide Sequence

PEP ID	Os05t0346800-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:16327564:16328326:-1 gene:Os05g0346800 transcript:Os05t0346800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ASL5; DNA binding / protein binding. (Os05t0346800-00)
Sequence	IDREREGMGGGSPCASCKLLRRRCTKDCIFAPFFPADDPHKFAIVHKVFGASNVSKMLQE LPAQQRGDAVSSLVYEANARMRDPVYGCVGAISFLQNQVSQLQMQLAVAQAEILCIQMQH RDDGAAHQLDAAADHHPLLDQQQQQQMVVDAADAAASFLVQNGGGGGGPAAQLISGYGSP AAGGGGGHGVVHYAAAQEHLKRESLWT

Transcript Sequence

Transcript ID	Os05t0346800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:16327564:16328326:-1 gene:Os05g0346800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ASL5; DNA binding / protein binding. (Os05t0346800-00)
Sequence	ATAGATAGAGAGAGAGAGGGGATGGGCGGTGGGTCGCCGTGCGCGTCGTGCAAGCTGCTG CGGCGGCGGTGCACCAAGGACTGCATCTTCGCGCCCTTCTTCCCCGCCGACGACCCCCAC AAGTTCGCCATCGTCCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATGCTCCAGGAG CTGCCGGCGCAGCAGCGAGGCGACGCGGTAAGCAGCCTGGTGTACGAGGCGAACGCCCGG ATGCGGGACCCCGTCTACGGCTGCGTCGGGGCCATCTCCTTCCTCCAGAACCAGGTGTCG CAGCTGCAGATGCAGCTCGCCGTCGCGCAGGCCGAGATCCTCTGTATCCAGATGCAGCAC CGCGACGACGGCGCCGCCCACCAGCTGGACGCCGCCGCCGACCACCACCCGCTGCTGGAT CAGCAGCAGCAACAGCAGATGGTCGTGGACGCCGCCGACGCGGCCGCCTCCTTCCTCGTG CAGAACGGCGGCGGAGGCGGAGGCCCCGCGGCGCAGCTGATAAGCGGCTACGGCTCGCCG GCGGCCGGCGGCGGCGGTGGCCATGGCGTGGTGCACTACGCGGCGGCGCAGGAGCATCTC AAGAGGGAGTCGCTCTGGACGTAGCTAGTCAGGTCAACGCATGCACGTTAGCTTG