Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0346500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:16312809:16319379:-1 gene:Os05g0346500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 85 domain containing protein. (Os05t0346500-01)
Sequence	CGCCGCCTCCGCAGCATGCTCCCCTCCGCCGCCCCCGCCGCCGCCGCCGGAGAAGAAGAA GAAGAAGGCGAGCGGCGGCCGTGGGAGCCGCCCTTCGACGCGTCCCAGCCGGCGCCGCCC ATCTCCTACCCCATCACCACGCTCGCGGCGCTCGCCTCCCGCGCCTACCTCTCCGAGGCC GGCAACTTCCACCTCCCCTTCAACCGCGCCTCCTCCTCGCCCCGGGCCGCGCCGCTCCCG CCCCGGCGCCGCATCCTCGCGTGCCACGACTTCCGGGGCGGGTACCGCGACGACGCGGCG CCGCAGGGGGGCCACGACCCGGGCGCCTACGCGCTCTGGCACTGGCACCTCATCGACGTT TTCGTCTACTTCTCACACTACCTCGTCACGCTCCCGCCGCCGTGCTGGGTCAACGCCGCC CACCTCCACGGCGTCAAGGTTTTGGGGACGTTCATCACAGAGTGGGAGAAAGGTGCAGAG ATCTGCGAGGAGATGCTTGCTACGGAGGCTTCTGCCCAAATGTATGCTGAAAGGCTAACA GAGCTGGCTGCTTACTTGGGCTTTGATGGCTGGCTGATCAATATTGAGGTTAAACTCGAC ATACAATTCATTGATAACCTGAAAGAATTTATCAATCATCTAACCAAGACAATGCATGCT GCTGTTCCTGGATCATTAGTCATATGGTATGATGCAATTACTATAAAAGGTGCCCTTGAC TGGCAGAATAAGCTTAACGAGTATAACAAGCCATTCTTTGACTTGTGTGATGGACTGTTT AGCAATTATACTTGGAAGGCAAAATATCCACAAGAATCAGCTGTAGTTGCTGGTGAAAGG AAGTACGACGTGTACATGGGTATTGATGTTTACGGACGAAACACTTTCGGTGGTGGTCAG TGGAATACCAATGTTGCCCTTGATCTACTCAAGAAAGATGATGTCTCAGCTGCCATATTT GCACCTGGATGGGTATATGAAACTAAGCAACCACCTAACTTTCGGACTGCACAAAATCGT TGGTGGGGTCTTGTTCAAGAATCATGGGGTGTTCTTCAGAGTTATCCAAAACAGTTGCCT TTTTACTCTGATTTTGATCAGGGTCATGGTTACCAGGTATCAATTGAAGGGGTCAAAGTT TATGGTGCTCCATGGGACAATATTTCTTGCCAAAGTTTCCAGCCTATGCTGAAATATGCT GGAGATCGAGGTCTGCAAACTGTTATCAATTTCGAGGATGAACCATACAGTGGAGGGAAT TGTGTTACAGTGAAGGGAAGTCTCCAGCAGAATGAAATTTTCTCAGAACAGCTTTTTAAT GGGGGCCTTTCCATGGAGGGGGAATCTGTATATGTGTTTTATTCAGTAAAAGCCGATGAA CGCTCTGGTTTAGGGTTGTCACTGGATTTGTCATCCGGAAACAATGAGAGCAGTTCCATT CTTATTGCTGATGACACAGCAGCATTCACAAGAAAGAAACAACACCGAAAATATGGCTCA TATGTTAAAGCTGATAAGGCAGAACCACACACTCCAGTTCACCAAAATTGGGTTGTCTAC AAAGCAACTATCCTGCCCAGTGCTGGCTTTACATTAACTGGGATCAACATAGTCTGCACA ATGAAAACCACTAGCGGAACTGATCCAGAAACAGATGGAGATGGAAGCTCAGAAGCAGGT GCAAACAGATCATTGCATTACCATGCATCGCTTGGCCATGTTAGCATTCGAAACACTGAA GAAACAGAGTTCCCTCCAGCAAGATCATGGGTGACGGAAGGCGATTACATCTCCTGGTCG AATGGTTCAGATGAATCTAAACTTGCAAGCCTGAAAATCAGTTGGGAACTTGAAAATAAA CAGCAGGCACCATTCATGAAGTACAATGTCTATGTTGAGAAGTTAACTGCAGACTCAAAT GCAAAGGCTCCCAGAATTTTCCTTGGAGTTGCCAGCGTACAAGTCTTCTATGTATCTGAC CTAGAGGTCCCCAGCGAAGTCACTGCTCTGAAATTTTTCATTCAACCGTGTGGGCGTGAT GGGAGTTGCCAAGGACTGCACGAATGCCCAAAGTTCCATTTGGTTCCTGTTGATTCTGCC ATGTAA

Peptide Sequence

PEP ID	Os05t0346500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:16312809:16319379:-1 gene:Os05g0346500 transcript:Os05t0346500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 85 domain containing protein. (Os05t0346500-01)
Sequence	RRLRSMLPSAAPAAAAGEEEEEGERRPWEPPFDASQPAPPISYPITTLAALASRAYLSEA GNFHLPFNRASSSPRAAPLPPRRRILACHDFRGGYRDDAAPQGGHDPGAYALWHWHLIDV FVYFSHYLVTLPPPCWVNAAHLHGVKVLGTFITEWEKGAEICEEMLATEASAQMYAERLT ELAAYLGFDGWLINIEVKLDIQFIDNLKEFINHLTKTMHAAVPGSLVIWYDAITIKGALD WQNKLNEYNKPFFDLCDGLFSNYTWKAKYPQESAVVAGERKYDVYMGIDVYGRNTFGGGQ WNTNVALDLLKKDDVSAAIFAPGWVYETKQPPNFRTAQNRWWGLVQESWGVLQSYPKQLP FYSDFDQGHGYQVSIEGVKVYGAPWDNISCQSFQPMLKYAGDRGLQTVINFEDEPYSGGN CVTVKGSLQQNEIFSEQLFNGGLSMEGESVYVFYSVKADERSGLGLSLDLSSGNNESSSI LIADDTAAFTRKKQHRKYGSYVKADKAEPHTPVHQNWVVYKATILPSAGFTLTGINIVCT MKTTSGTDPETDGDGSSEAGANRSLHYHASLGHVSIRNTEETEFPPARSWVTEGDYISWS NGSDESKLASLKISWELENKQQAPFMKYNVYVEKLTADSNAKAPRIFLGVASVQVFYVSD LEVPSEVTALKFFIQPCGRDGSCQGLHECPKFHLVPVDSAM

Transcript Sequence

Transcript ID	Os05t0346500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:16312809:16319379:-1 gene:Os05g0346500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 85 domain containing protein. (Os05t0346500-01)
Sequence	CCGCCGCCTCCGCAGCATGCTCCCCTCCGCCGCCCCCGCCGCCGCCGCCGGAGAAGAAGA AGAAGAAGGCGAGCGGCGGCCGTGGGAGCCGCCCTTCGACGCGTCCCAGCCGGCGCCGCC CATCTCCTACCCCATCACCACGCTCGCGGCGCTCGCCTCCCGCGCCTACCTCTCCGAGGC CGGCAACTTCCACCTCCCCTTCAACCGCGCCTCCTCCTCGCCCCGGGCCGCGCCGCTCCC GCCCCGGCGCCGCATCCTCGCGTGCCACGACTTCCGGGGCGGGTACCGCGACGACGCGGC GCCGCAGGGGGGCCACGACCCGGGCGCCTACGCGCTCTGGCACTGGCACCTCATCGACGT TTTCGTCTACTTCTCACACTACCTCGTCACGCTCCCGCCGCCGTGCTGGGTCAACGCCGC CCACCTCCACGGCGTCAAGGTTTTGGGGACGTTCATCACAGAGTGGGAGAAAGGTGCAGA GATCTGCGAGGAGATGCTTGCTACGGAGGCTTCTGCCCAAATGTATGCTGAAAGGCTAAC AGAGCTGGCTGCTTACTTGGGCTTTGATGGCTGGCTGATCAATATTGAGGTTAAACTCGA CATACAATTCATTGATAACCTGAAAGAATTTATCAATCATCTAACCAAGACAATGCATGC TGCTGTTCCTGGATCATTAGTCATATGGTATGATGCAATTACTATAAAAGGTGCCCTTGA CTGGCAGAATAAGCTTAACGAGTATAACAAGCCATTCTTTGACTTGTGTGATGGACTGTT TAGCAATTATACTTGGAAGGCAAAATATCCACAAGAATCAGCTGTAGTTGCTGGTGAAAG GAAGTACGACGTGTACATGGGTATTGATGTTTACGGACGAAACACTTTCGGTGGTGGTCA GTGGAATACCAATGTTGCCCTTGATCTACTCAAGAAAGATGATGTCTCAGCTGCCATATT TGCACCTGGATGGGTATATGAAACTAAGCAACCACCTAACTTTCGGACTGCACAAAATCG TTGGTGGGGTCTTGTTCAAGAATCATGGGGTGTTCTTCAGAGTTATCCAAAACAGTTGCC TTTTTACTCTGATTTTGATCAGGGTCATGGTTACCAGGTATCAATTGAAGGGGTCAAAGT TTATGGTGCTCCATGGGACAATATTTCTTGCCAAAGTTTCCAGCCTATGCTGAAATATGC TGGAGATCGAGGTCTGCAAACTGTTATCAATTTCGAGGATGAACCATACAGTGGAGGGAA TTGTGTTACAGTGAAGGGAAGTCTCCAGCAGAATGAAATTTTCTCAGAACAGCTTTTTAA TGGGGGCCTTTCCATGGAGGGGGAATCTGTATATGTGTTTTATTCAGTAAAAGCCGATGA ACGCTCTGGTTTAGGGTTGTCACTGGATTTGTCATCCGGAAACAATGAGAGCAGTTCCAT TCTTATTGCTGATGACACAGCAGCATTCACAAGAAAGAAACAACACCGAAAATATGGCTC ATATGTTAAAGCTGATAAGGCAGAACCACACACTCCAGTTCACCAAAATTGGGTTGTCTA CAAAGCAACTATCCTGCCCAGTGCTGGCTTTACATTAACTGGGATCAACATAGTCTGCAC AATGAAAACCACTAGCGGAACTGATCCAGAAACAGATGGAGATGGAAGCTCAGAAGCAGG TGCAAACAGATCATTGCATTACCATGCATCGCTTGGCCATGTTAGCATTCGAAACACTGA AGAAACAGAGTTCCCTCCAGCAAGATCATGGGTGACGGAAGGCGATTACATCTCCTGGTC GAATGGTTCAGATGAATCTAAACTTGCAAGCCTGAAAATCAGTTGGGAACTTGAAAATAA ACAGCAGGCACCATTCATGAAGTACAATGTCTATGTTGAGAAGTTAACTGCAGACTCAAA TGCAAAGGCTCCCAGAATTTTCCTTGGAGTTGCCAGCGTACAAGTCTTCTATGTATCTGA CCTAGAGGTCCCCAGCGAAGTCACTGCTCTGAAATTTTTCATTCAACCGTGTGGGCGTGA TGGGAGTTGCCAAGGACTGCACGAATGCCCAAAGTTCCATTTGGTTCCTGTTGATTCTGC CATGTAACATTTATCTGCCTACCTTGCTGTTTTCAGTACTCTATGTTTTCACATCATTTA TCACGTTATATGTTTATAAACAGAATCGTTCAATGTGATCTTTCAATAAAGAGTAAATCA TGTTGTTACCT