Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0346100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:16289514:16296595:1 gene:Os05g0346100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-like domain containing protein. (Os05t0346100-01)
Sequence	ATGATGTCCTCCACGGCGCCGCCGGACATGCCCGCCGGCGACGGGGACGGCGACATGGAG ACGCTCCCCCTCGCCTCCGACTACGCCTCCGTCGCCTCCACCTTCGATCCCCTCCTCTCC TCCGCCGCCGCCGCCGCCTCGCCGCCCTCCCCAACCATCGCCGCCGCCGCCGCCTTCCCG CTCTCCCCGTCCTCCTCCTCCTCCTTCGTGGACCCGCCCTCCTACGCCGACGTCGCCGCC TCCTCCTCCTCCTCCCCGCGCTCCGCATCCGCCTCCGCCTCCGCCTCCCCGAGATCCGCC GCGTCCGACTACGCCCTCATCGCCGTCTCCGACCCCACGCCCGAGGCCGAGCCCGCCGCC ACCTCCCTCGTCCCCGGATCCGCCCCGACCTACATCTCCTACCTCGTCACCAGCGCCCGC CGCGGGGACCACCGCCGCCACGCCGTCCGCCGCCGCTTCCGCGACTTCGTCACCCTCGCC GACCGCCTCGCCGAGGCCTTCCGGGGCCACTTCGTGCCCCCGCGCCCGGACAAGAACACC GTCGAGAGCCAGGTCATGCAGCGCGACGAGTTCGTCGCCCAGCGCCGCGCCGCCCTCGAG AGGTACCTGTGGCGCCTCGCCGAGCACCCCGCGATCGGCCCCAGCGACGAGCTGCGCGTC TTCCTGCAGGCCGAGGGCAAGATGCCGCTGCCGAGCACCACCGATGTCGCTTCGCGGATG CTCGACGGCGCAGCGCGGCTGCCACGGCAGCTGCTCGCCGGCGAGGAGGCCGTGGCTGCG CCGCAGGAGGTGGTGCAGCCAGCCAAGGGCGGTAGGGACCTTCTGCGGATATTTAAGGAG CTGAAGCAATCAGTCGTGTCTGACTGGGGCGGCGTCAGGCCGCCTTTGGTAGAGGAGGAT AAGGAGTTCCTAGACAAAAAGCAGAAGCTGCAGGATTGGGAGCAGCAGTTGACTAGCGCA TCACAACAGGCTGAAGCACTTGTGAAGGCTCAGCAAGATATGGGTGAAACAATGGGGGCA CTTGGATTGGCATTCATCAAACTTACAAAATTTGAGACGGAGGAAGCAATGTATGACTCT CAGAGGATAAGAGCTGCTGACAGCAAACGTATAGCCACTGCAGCTGTCAAAGCTAGCCGA GCATGTCGAGATTTGAATACGCAAACTGTCAAATATCTGGACACTCTCCATGAACATCTA GGGATAATGCTGTCTGTCCATACTGCATTTTCTGATCGGTCAAGTGCATTATTGACTGTA CAAACGCTCATGTCAGACCTGGCATCATTGCAATTGAGGATTGAAAAACTCGAAGCAGCT GCATCAAAAATATTTGGTGGTGATAAATCTAGGCTTCGCAAAGTTGAAGAGTTAAGGGAA ACAATAAGGGCTACTGAAGATGCTAAATGCTGTGCACTAAGGGAATATGAGAGAATCAAG GAAAATAATAGAAGTGAACTCAACAGACTAGACCGAGAGAAGAAGGAGGATATGCTTGAG ATGATAAAAGGATATGTTACAAGCCAAGCTGCATACGCTGAGAAGATCGTGGAGGGTTGG GAGACAGTTGCAGAGGAGACGAGTGGATACGCCCGAAGATCTGATAACAACATAGCGTGG TAG

Peptide Sequence

PEP ID	Os05t0346100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:16289514:16296595:1 gene:Os05g0346100 transcript:Os05t0346100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-like domain containing protein. (Os05t0346100-01)
Sequence	MMSSTAPPDMPAGDGDGDMETLPLASDYASVASTFDPLLSSAAAAASPPSPTIAAAAAFP LSPSSSSSFVDPPSYADVAASSSSSPRSASASASASPRSAASDYALIAVSDPTPEAEPAA TSLVPGSAPTYISYLVTSARRGDHRRHAVRRRFRDFVTLADRLAEAFRGHFVPPRPDKNT VESQVMQRDEFVAQRRAALERYLWRLAEHPAIGPSDELRVFLQAEGKMPLPSTTDVASRM LDGAARLPRQLLAGEEAVAAPQEVVQPAKGGRDLLRIFKELKQSVVSDWGGVRPPLVEED KEFLDKKQKLQDWEQQLTSASQQAEALVKAQQDMGETMGALGLAFIKLTKFETEEAMYDS QRIRAADSKRIATAAVKASRACRDLNTQTVKYLDTLHEHLGIMLSVHTAFSDRSSALLTV QTLMSDLASLQLRIEKLEAAASKIFGGDKSRLRKVEELRETIRATEDAKCCALREYERIK ENNRSELNRLDREKKEDMLEMIKGYVTSQAAYAEKIVEGWETVAEETSGYARRSDNNIAW

Transcript Sequence

Transcript ID	Os05t0346100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:16289514:16296595:1 gene:Os05g0346100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-like domain containing protein. (Os05t0346100-01)
Sequence	ACGCCGTCTCACCCACCCCTCGCCGCGCCGCAACCCTCGCCGCGCCGCCATGATGTCCTC CACGGCGCCGCCGGACATGCCCGCCGGCGACGGGGACGGCGACATGGAGACGCTCCCCCT CGCCTCCGACTACGCCTCCGTCGCCTCCACCTTCGATCCCCTCCTCTCCTCCGCCGCCGC CGCCGCCTCGCCGCCCTCCCCAACCATCGCCGCCGCCGCCGCCTTCCCGCTCTCCCCGTC CTCCTCCTCCTCCTTCGTGGACCCGCCCTCCTACGCCGACGTCGCCGCCTCCTCCTCCTC CTCCCCGCGCTCCGCATCCGCCTCCGCCTCCGCCTCCCCGAGATCCGCCGCGTCCGACTA CGCCCTCATCGCCGTCTCCGACCCCACGCCCGAGGCCGAGCCCGCCGCCACCTCCCTCGT CCCCGGATCCGCCCCGACCTACATCTCCTACCTCGTCACCAGCGCCCGCCGCGGGGACCA CCGCCGCCACGCCGTCCGCCGCCGCTTCCGCGACTTCGTCACCCTCGCCGACCGCCTCGC CGAGGCCTTCCGGGGCCACTTCGTGCCCCCGCGCCCGGACAAGAACACCGTCGAGAGCCA GGTCATGCAGCGCGACGAGTTCGTCGCCCAGCGCCGCGCCGCCCTCGAGAGGTACCTGTG GCGCCTCGCCGAGCACCCCGCGATCGGCCCCAGCGACGAGCTGCGCGTCTTCCTGCAGGC CGAGGGCAAGATGCCGCTGCCGAGCACCACCGATGTCGCTTCGCGGATGCTCGACGGCGC AGCGCGGCTGCCACGGCAGCTGCTCGCCGGCGAGGAGGCCGTGGCTGCGCCGCAGGAGGT GGTGCAGCCAGCCAAGGGCGGTAGGGACCTTCTGCGGATATTTAAGGAGCTGAAGCAATC AGTCGTGTCTGACTGGGGCGGCGTCAGGCCGCCTTTGGTAGAGGAGGATAAGGAGTTCCT AGACAAAAAGCAGAAGCTGCAGGATTGGGAGCAGCAGTTGACTAGCGCATCACAACAGGC TGAAGCACTTGTGAAGGCTCAGCAAGATATGGGTGAAACAATGGGGGCACTTGGATTGGC ATTCATCAAACTTACAAAATTTGAGACGGAGGAAGCAATGTATGACTCTCAGAGGATAAG AGCTGCTGACAGCAAACGTATAGCCACTGCAGCTGTCAAAGCTAGCCGAGCATGTCGAGA TTTGAATACGCAAACTGTCAAATATCTGGACACTCTCCATGAACATCTAGGGATAATGCT GTCTGTCCATACTGCATTTTCTGATCGGTCAAGTGCATTATTGACTGTACAAACGCTCAT GTCAGACCTGGCATCATTGCAATTGAGGATTGAAAAACTCGAAGCAGCTGCATCAAAAAT ATTTGGTGGTGATAAATCTAGGCTTCGCAAAGTTGAAGAGTTAAGGGAAACAATAAGGGC TACTGAAGATGCTAAATGCTGTGCACTAAGGGAATATGAGAGAATCAAGGAAAATAATAG AAGTGAACTCAACAGACTAGACCGAGAGAAGAAGGAGGATATGCTTGAGATGATAAAAGG ATATGTTACAAGCCAAGCTGCATACGCTGAGAAGATCGTGGAGGGTTGGGAGACAGTTGC AGAGGAGACGAGTGGATACGCCCGAAGATCTGATAACAACATAGCGTGGTAGCATTCACA ACTTTTGCCCGTCTTCTCTTGGTTGGCACATGTGAGTGTGTATGTACAATGTGTAACCTA GGATGGTGAAGGCCAAAAGTAGAAGAAAGACCTAATTCAATTTGTTTTTCATTTATTTAA AGAATATTGGCGTAGTTCAACTATCGGGAGTACAGACGCACATCGTCACACTACTGCCGT ACTGCGCATACGATTGGAGCTGCCTGCCTGCTTGGTTAACTTCTGCAACGTTTGTTCAGC TT