Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0344200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:16178796:16179674:-1 gene:Os05g0344200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0344200-01)
Sequence

ATGGAGGTGGCGAGAGGCGGCGGGAAGCTGAACCCGTGGGCGGAGCCCTTCGTGCCGGCG
GGCTGGTCGGCCACCTACTGGCGCTGCGGCGGCGTCGCTGCCGTGGAGCCGGCTGTGGCC
GAGGTGGAGGACTTCTCCCCGGAGTGGTGGCGCCTCGTCGGCTCCTCCCCGGCCTTCCGC
GACCGCTGGCTCCGGGACTACTCCGCGCTGGGCCTCCTCGACGACAACGACAACGGCGAC
GGCTACGACCTCGAGGGGTTCCTCCTCCCCGACGACCTCTTCTCCTCCACCCCTCATCTG
GTGGGAGAACCGGCGGATGAGAAGGAGGGCAAGGGTTTCGGCGGCGCCGGGGGGAAGAAG
GTGAAGGGCGGGTCCGCCGAGGTGGTGGCGTGGGGCATCGACAAGTGGTGGCGCGCGCAC
TCCTCGCCGCCGGAGGTGCCCAGGTACGCCGACAAGGCGCCCAGGAGGGTCGCCGCCGCC
GCCGCTAGGGTCAACCCCCGCCCCATCCAGCAGCCGCGCTGA

Peptide Sequence

PEP ID

Os05t0344200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:16178796:16179674:-1 gene:Os05g0344200 transcript:Os05t0344200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0344200-01)
Sequence

MEVARGGGKLNPWAEPFVPAGWSATYWRCGGVAAVEPAVAEVEDFSPEWWRLVGSSPAFR
DRWLRDYSALGLLDDNDNGDGYDLEGFLLPDDLFSSTPHLVGEPADEKEGKGFGGAGGKK
VKGGSAEVVAWGIDKWWRAHSSPPEVPRYADKAPRRVAAAAARVNPRPIQQPR

Transcript Sequence

Transcript ID

Os05t0344200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:16178796:16179674:-1 gene:Os05g0344200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0344200-01)
Sequence

ATCCATATCCATATTTTCCCCTTTTCCATCCGCGAGCGAGGGAGTGAGTGAGCAATCGAG
ATCGAGATGGAGGTGGCGAGAGGCGGCGGGAAGCTGAACCCGTGGGCGGAGCCCTTCGTG
CCGGCGGGCTGGTCGGCCACCTACTGGCGCTGCGGCGGCGTCGCTGCCGTGGAGCCGGCT
GTGGCCGAGGTGGAGGACTTCTCCCCGGAGTGGTGGCGCCTCGTCGGCTCCTCCCCGGCC
TTCCGCGACCGCTGGCTCCGGGACTACTCCGCGCTGGGCCTCCTCGACGACAACGACAAC
GGCGACGGCTACGACCTCGAGGGGTTCCTCCTCCCCGACGACCTCTTCTCCTCCACCCCT
CATCTGGTGGGAGAACCGGCGGATGAGAAGGAGGGCAAGGGTTTCGGCGGCGCCGGGGGG
AAGAAGGTGAAGGGCGGGTCCGCCGAGGTGGTGGCGTGGGGCATCGACAAGTGGTGGCGC
GCGCACTCCTCGCCGCCGGAGGTGCCCAGGTACGCCGACAAGGCGCCCAGGAGGGTCGCC
GCCGCCGCCGCTAGGGTCAACCCCCGCCCCATCCAGCAGCCGCGCTGAGCGTCCGTCTCC
GCCGCCGCCCGCGTAATCATCCATCCATCCACCCATCTTGACAAACAAGCAGAAAAAAAT
TAGGGAAAAAAAGGTTTTGTTTTGTTATTTTCGATCTACTCCTAGCTTTTTTGCTAATCT
CGTCGCGTCGTCATCGTCGTCAAGATCTGGGTTTTGGTCAGGATCTATGGAGCTGCGAGA
GATCTCCCCTGTGTTGTGTACAGAATCATGTAAAAAAAATGCTGATGTAATAAAGATTGC
AGCGAGAGATTTCGCAGCTGCTGCCTTGTAATTTCCGAG