Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0341900-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:16045008:16046612:1 gene:Os05g0341900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAG20. (Os05t0341900-00)
Sequence	ATGGCGAGAGCGGATTCAGCTGGCGCTGGCGCTCCAGAAGCCATTGATGGCGAGCTGGTG GAGCTGGAGCTCGGGGAGAGAAACAATGGCGTCCCTCCCGTCGCCGAGGAAGAAGGCGGC GAGCCAAGACCCGGTGGCCGGCCGCCGGCGTCGGGGCGCCGCCTCCTCAGGCGACTCAGC CCGGCATCCGTGGCGCGCGCGTGCGGGCGGTGGCTGAGGCACCCGGCGCACCTCGCCCTG CTGGCGTGGGCGCTCTGCGTCGCGGCGTCGGGCGCCATGCTCGCGCTCCTCCTCCTCGGC GCCCTCGACGGCGCGTTCCCGCGCAAGTCGGCCCGCAACCGGTGGATCGAGGTGAACAAC CAGGTGCTCAACGCGCTCTTCACCCTCATGAGCATCTACCAGCACCCGGCGCTCTTCCAC CACGCCGCCATGCTCCTCCGGTGGCGCCCGGACGACGTCAAGGCGCTCAGGAAGGCGTAC CGCCGCCGCCGGAAGGCCGCCGCCGCCGGAGACGGCGCAGGGGGGTGGGAGCGGCTTCAC ATGTCCGTGGTGGTCGCGCTCCTCCACGTCGCCTGCTTCGCGCAGTACGCCATGTGCGGC CTCTACTGGGGCTACTCCCGCAAGGCCCGCCCGGACGCCGCCGAGACCTCGCTCGCCGTG ATCGGCGCCGCGACGCCGGCGCTCGCGGGCCTGTACGCGTACTTCGGCCCGCTCGGGAGG AGGAAGCCCGGGACGGCGACGAGCGCGCGCCACCAGGAGGAACCCGACGACCTTGAGCTC GCCGCCGCCGCCGCCGCCGACGTCGTGGTCGCGGAGTGGGCCGGCGGGCTGCTCGACGTC GGCGACGACCCGACGGCGTGGTGGCTGTCGTGCCTCTGCACGTTCTGCGTGTTCGGGTGG AACATGGAGCGGATGGGCCTCGGGAACAAGCACGTGCACGCCGTCACGTTCGCGCTCCTC TGCTTCGCGCCGCTCTGGGTGCTCAACGTCGCCGCCATGAACATCCGAGACGAGGCCGTC GGCGACGCGGTCGGCGCGGTGGCGGTGGCGCTCTGCGCGCTCGGCCTCCTCTACGGCGGC TACTGGCGGGCGCGGATGCGGCGGCGGTTCGGGCTCCTCCCCGGGCGGCACGGCGGCGGC GGCGCGTGCTGCGGCTCGCCGTCCTCGCTCGCCGACTACCTGCGGTGGATGTTCTGCTGG AGCTGCGCGCTGGCGCAGGAGGTGAGGACGGCGAACGTCCTGCTCCTCGACGCCGACGAG GCTGGCGGCGCCGGAGGGGGAAGCTCAAGCTCCGGCGGCGGCGGGCGAGGTGACGCCACT CTGCTGCAGCCGTTGCCGCGGGAGAACGGGGTGAAGCTGGCATTCCATCATGCAGCTGCA GTGCCAGTGGACACGGACGCGGCCTACGGGCCGCCGGTGAACGGCTCGCCACACCGCGGC AGCGGCGGCGGCGGCGATGAGTCGCCGTTGCTGCAGAGGCAGCAGGGTCGCGAGTCTCAG GCTGAGGAAATGAGGCCGCCTCTGCAGCCATTGATGACGGAAGCAGAATGCCGACGGGTT CAGTAA

Peptide Sequence

PEP ID	Os05t0341900-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:16045008:16046612:1 gene:Os05g0341900 transcript:Os05t0341900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAG20. (Os05t0341900-00)
Sequence	MARADSAGAGAPEAIDGELVELELGERNNGVPPVAEEEGGEPRPGGRPPASGRRLLRRLS PASVARACGRWLRHPAHLALLAWALCVAASGAMLALLLLGALDGAFPRKSARNRWIEVNN QVLNALFTLMSIYQHPALFHHAAMLLRWRPDDVKALRKAYRRRRKAAAAGDGAGGWERLH MSVVVALLHVACFAQYAMCGLYWGYSRKARPDAAETSLAVIGAATPALAGLYAYFGPLGR RKPGTATSARHQEEPDDLELAAAAAADVVVAEWAGGLLDVGDDPTAWWLSCLCTFCVFGW NMERMGLGNKHVHAVTFALLCFAPLWVLNVAAMNIRDEAVGDAVGAVAVALCALGLLYGG YWRARMRRRFGLLPGRHGGGGACCGSPSSLADYLRWMFCWSCALAQEVRTANVLLLDADE AGGAGGGSSSSGGGGRGDATLLQPLPRENGVKLAFHHAAAVPVDTDAAYGPPVNGSPHRG SGGGGDESPLLQRQQGRESQAEEMRPPLQPLMTEAECRRVQ

Transcript Sequence

Transcript ID	Os05t0341900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:16045008:16046612:1 gene:Os05g0341900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAG20. (Os05t0341900-00)
Sequence	ATGGCGAGAGCGGATTCAGCTGGCGCTGGCGCTCCAGAAGCCATTGATGGCGAGCTGGTG GAGCTGGAGCTCGGGGAGAGAAACAATGGCGTCCCTCCCGTCGCCGAGGAAGAAGGCGGC GAGCCAAGACCCGGTGGCCGGCCGCCGGCGTCGGGGCGCCGCCTCCTCAGGCGACTCAGC CCGGCATCCGTGGCGCGCGCGTGCGGGCGGTGGCTGAGGCACCCGGCGCACCTCGCCCTG CTGGCGTGGGCGCTCTGCGTCGCGGCGTCGGGCGCCATGCTCGCGCTCCTCCTCCTCGGC GCCCTCGACGGCGCGTTCCCGCGCAAGTCGGCCCGCAACCGGTGGATCGAGGTGAACAAC CAGGTGCTCAACGCGCTCTTCACCCTCATGAGCATCTACCAGCACCCGGCGCTCTTCCAC CACGCCGCCATGCTCCTCCGGTGGCGCCCGGACGACGTCAAGGCGCTCAGGAAGGCGTAC CGCCGCCGCCGGAAGGCCGCCGCCGCCGGAGACGGCGCAGGGGGGTGGGAGCGGCTTCAC ATGTCCGTGGTGGTCGCGCTCCTCCACGTCGCCTGCTTCGCGCAGTACGCCATGTGCGGC CTCTACTGGGGCTACTCCCGCAAGGCCCGCCCGGACGCCGCCGAGACCTCGCTCGCCGTG ATCGGCGCCGCGACGCCGGCGCTCGCGGGCCTGTACGCGTACTTCGGCCCGCTCGGGAGG AGGAAGCCCGGGACGGCGACGAGCGCGCGCCACCAGGAGGAACCCGACGACCTTGAGCTC GCCGCCGCCGCCGCCGCCGACGTCGTGGTCGCGGAGTGGGCCGGCGGGCTGCTCGACGTC GGCGACGACCCGACGGCGTGGTGGCTGTCGTGCCTCTGCACGTTCTGCGTGTTCGGGTGG AACATGGAGCGGATGGGCCTCGGGAACAAGCACGTGCACGCCGTCACGTTCGCGCTCCTC TGCTTCGCGCCGCTCTGGGTGCTCAACGTCGCCGCCATGAACATCCGAGACGAGGCCGTC GGCGACGCGGTCGGCGCGGTGGCGGTGGCGCTCTGCGCGCTCGGCCTCCTCTACGGCGGC TACTGGCGGGCGCGGATGCGGCGGCGGTTCGGGCTCCTCCCCGGGCGGCACGGCGGCGGC GGCGCGTGCTGCGGCTCGCCGTCCTCGCTCGCCGACTACCTGCGGTGGATGTTCTGCTGG AGCTGCGCGCTGGCGCAGGAGGTGAGGACGGCGAACGTCCTGCTCCTCGACGCCGACGAG GCTGGCGGCGCCGGAGGGGGAAGCTCAAGCTCCGGCGGCGGCGGGCGAGGTGACGCCACT CTGCTGCAGCCGTTGCCGCGGGAGAACGGGGTGAAGCTGGCATTCCATCATGCAGCTGCA GTGCCAGTGGACACGGACGCGGCCTACGGGCCGCCGGTGAACGGCTCGCCACACCGCGGC AGCGGCGGCGGCGGCGATGAGTCGCCGTTGCTGCAGAGGCAGCAGGGTCGCGAGTCTCAG GCTGAGGAAATGAGGCCGCCTCTGCAGCCATTGATGACGGAAGCAGAATGCCGACGGGTT CAGTAATAATGCCAGGAGCAATGCGTGCGACAGAGTCCAGAAATG