Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0341600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:16019207:16023701:-1 gene:Os05g0341600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab5D1 description:Similar to Ras-related protein Rab-21. (Os05t0341600-01)
Sequence	ATGGGCTCGAAGCCGCCGCCGCCGCCGCAGCCCAGCGTCTCCTTCAAGCTCGTCCTCCTC GGCGACGGGAGAGTAGGCAAAACATCTCTTGTGCTGCGGTATGTGAATGATGTCTTCTCA GACAAACAGGAAGCAACTGTTCAAGCTTCATATTTGACAAAGCGCCTTGTTGTTGAAGGT GTGCCTATTACGCTCTCTATCTGGGATACAGCTGGACAAGAGAAGTTCCATGCACTAGGC CCTATATACTATCGTGATGCAGACGCTGCTCTTTTAGTATATGACATCACAGACAATGAT ACTTTTCTTCGTGTCACAAAGTGGGTGAAAGAGCTTAAGCAAATGGCAAATAAAGATATT GTTATGGCCATTGCAGCAAATAAAAGTGACCTGGTTAGATCAAAACACATAGACACTAAT GAAGCAGCAAGCTATGCAGAAAGTATTGGGGCAACTCTCTTTGTTACTTCTGCCAAAGCT GGTACTGGGATTGATGATATCTTCAGTGACATAGCCAAGAGATTATTAGAGAGAAGAAAA AACAGCTCCGATGGCTTGTCACTGGCTCATCCAAAGAAAGGCATTTTAATCGTCGACGAT GAACCTGAGAAAGAACCTCCACCAAAGTGCTGCTCATAG

Peptide Sequence

PEP ID	Os05t0341600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:16019207:16023701:-1 gene:Os05g0341600 transcript:Os05t0341600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab5D1 description:Similar to Ras-related protein Rab-21. (Os05t0341600-01)
Sequence	MGSKPPPPPQPSVSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEG VPITLSIWDTAGQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDI VMAIAANKSDLVRSKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLERRK NSSDGLSLAHPKKGILIVDDEPEKEPPPKCCS

Transcript Sequence

Transcript ID	Os05t0341600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:16019207:16023701:-1 gene:Os05g0341600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab5D1 description:Similar to Ras-related protein Rab-21. (Os05t0341600-01)
Sequence	TCCCACACTTCTCCTCTCTGACCACAGCACACACGCAACACCGGGACGGGCGATCCGGAA GGTTCTGGAACCTTCTAGAGGCTCGTAGGAGCCTCCGGCGGAACCCCTCTCGCCTCGCCT CGCCTCCGATGGGCTCGAAGCCGCCGCCGCCGCCGCAGCCCAGCGTCTCCTTCAAGCTCG TCCTCCTCGGCGACGGGAGAGTAGGCAAAACATCTCTTGTGCTGCGGTATGTGAATGATG TCTTCTCAGACAAACAGGAAGCAACTGTTCAAGCTTCATATTTGACAAAGCGCCTTGTTG TTGAAGGTGTGCCTATTACGCTCTCTATCTGGGATACAGCTGGACAAGAGAAGTTCCATG CACTAGGCCCTATATACTATCGTGATGCAGACGCTGCTCTTTTAGTATATGACATCACAG ACAATGATACTTTTCTTCGTGTCACAAAGTGGGTGAAAGAGCTTAAGCAAATGGCAAATA AAGATATTGTTATGGCCATTGCAGCAAATAAAAGTGACCTGGTTAGATCAAAACACATAG ACACTAATGAAGCAGCAAGCTATGCAGAAAGTATTGGGGCAACTCTCTTTGTTACTTCTG CCAAAGCTGGTACTGGGATTGATGATATCTTCAGTGACATAGCCAAGAGATTATTAGAGA GAAGAAAAAACAGCTCCGATGGCTTGTCACTGGCTCATCCAAAGAAAGGCATTTTAATCG TCGACGATGAACCTGAGAAAGAACCTCCACCAAAGTGCTGCTCATAGCGAGATTCCAATG CAAATCACGTGGGCATAATGTCATAGAAACCTGCAATTGATATGTGAAGGATCAAATCCT TGCATTAACTTTGCTCATGCTCTTTTGGAGCTCAGGAGCAATGCAAGTGTATACTGGTTG ATTATTTTTAGCTTGTGTAAATACTAAACTCAGTTCATGAAATTGTTGTCAAATATAGTT GTTCGATGATGACGATTCGATATGCCGAAGAAGTTCATGGCCCTTTGTATATCTGTAACT CACAGGTTGCTTATTTACTAGCTGTTGTTTTGAGGGGGTTATTTTGATCATGTGCGTCGA AATAATTGTGTCGTGTTGACTGCTGAGTGTACATGTATCGTGGTTATTCCATCTGAACCT GCAATGTAAAGCTTCCGTCCCAATTCCC