Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0334400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:15635377:15638517:-1 gene:Os05g0334400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein A8, rice DJA7 homolog description:Heat shock protein DnaJ family protein, Chloroplast development and differentiation (Os05t0334400-01)
Sequence	ATGGCGTTGCTACAGTTTGGAGGTACCTTGGCCCCCAAACTTGGGGAAAAACCTCAGCTG TTGCCCAGGTCACCTGCACTTACAAGAGTTATTTATGCTGATCCAAGATTTCTGGTGTCG AAAAGTGGTAGTGGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCA CGGACATCTTCTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGT TCAAGGTTCATTGTCAGAGCTGATGCTGATTTCTATTCCACACTTGGTGTTTCAAGAAAT GCTAGTAAATCTGAAATCAAGAGTGCCTATAGGAAGCTTGCTAGGAGCTACCATCCTGAT GTGAACAAAGATCCTGGTGCTGAACAAAAGTTCAAGGATATTAGCAATGCTTATGAGGTT TTGTCTGATGATGAGAAGCGATCAATCTATGATAAATATGGAGAAGCTGGTTTGAAGGGT GCTGGAATGGGAACAGGAGATTACTCAAACCCATTCGATCTCTTTGAATCATTATTCGAA GGCTTTGGTGGAATGGGGGGAATGGGAGGCCGTGCTGCTCGGAACAGACCAATGCAGGGT GATGATGAGGCCTACAATCTGGTACTCAATTTCAAGGAAGCGGTGTTTGGTGTAGAGAAA GAAATTGAGATCACCAGACTGGAAGGCTGTAATACATGTGATGGAACTGGTGCCAAGCCT GGAACGAAACCAACCACATGCAAAACATGTGGAGGACAGGGACAAGTGGTCTCCTCAACA AGAACGCCACTTGGAATATTCCAGCAGGTCTCCACCTGCAATACTTGCGGAGGCACTGGT GAATTCTCTACCCCGTGCAACACTTGTGGGGGTGATGGCCGAGTGCGGAAGACAAAAAGG ATCAGTCTAAAGGTTCCTGCTGGTGTTGATTCTGGAAGCAGATTGAGGGTCCGGTCTGAG GGGAATGCTGGGCGGAGAGGAGGCCCTCCTGGAGATCTTTATGTGTTTATTGATGTTCTC TCTGATCCTGTTCTTAAGCGAGATGGGACAAACATTCTATACACATGCAAAGTTTCATAT ATTGACGCAATTCTTGGGACAACCGTCAAGGTTCCCACTGTTGATGGGATGGTTGACCTG AAGATCCCCTCCGGTACCCAGCCAGGCACAACGTTAGTGATGTCCAAGAAAGGTGTCCCA CTCCTCGGGAAGTCAAATGCTCGTGGAGACCAGCTAGTGCGTGTGCAGGTCGAGATTCCA AAGCGTCTGAGCAGCGACGAGAGGAAGCTGATTGAAGAACTTGCAAACCTAAACAAGGCT CAAACAGCAAACAGCAGGAGATAA

Peptide Sequence

PEP ID	Os05t0334400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:15635377:15638517:-1 gene:Os05g0334400 transcript:Os05t0334400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein A8, rice DJA7 homolog description:Heat shock protein DnaJ family protein, Chloroplast development and differentiation (Os05t0334400-01)
Sequence	MALLQFGGTLAPKLGEKPQLLPRSPALTRVIYADPRFLVSKSGSGGRLKHLVSPTASLQS RTSSRLFNHAPSPRFRHRRSSRFIVRADADFYSTLGVSRNASKSEIKSAYRKLARSYHPD VNKDPGAEQKFKDISNAYEVLSDDEKRSIYDKYGEAGLKGAGMGTGDYSNPFDLFESLFE GFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEAVFGVEKEIEITRLEGCNTCDGTGAKP GTKPTTCKTCGGQGQVVSSTRTPLGIFQQVSTCNTCGGTGEFSTPCNTCGGDGRVRKTKR ISLKVPAGVDSGSRLRVRSEGNAGRRGGPPGDLYVFIDVLSDPVLKRDGTNILYTCKVSY IDAILGTTVKVPTVDGMVDLKIPSGTQPGTTLVMSKKGVPLLGKSNARGDQLVRVQVEIP KRLSSDERKLIEELANLNKAQTANSRR

Transcript Sequence

Transcript ID	Os05t0334400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:15635377:15638517:-1 gene:Os05g0334400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein A8, rice DJA7 homolog description:Heat shock protein DnaJ family protein, Chloroplast development and differentiation (Os05t0334400-01)
Sequence	AGCTAGTATATTGAAGGTTGAAGCTTTGTGGGTATCCAGCAAGTATTTCAATGGCGTTGC TACAGTTTGGAGGTACCTTGGCCCCCAAACTTGGGGAAAAACCTCAGCTGTTGCCCAGGT CACCTGCACTTACAAGAGTTATTTATGCTGATCCAAGATTTCTGGTGTCGAAAAGTGGTA GTGGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCACGGACATCTT CTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGTTCAAGGTTCA TTGTCAGAGCTGATGCTGATTTCTATTCCACACTTGGTGTTTCAAGAAATGCTAGTAAAT CTGAAATCAAGAGTGCCTATAGGAAGCTTGCTAGGAGCTACCATCCTGATGTGAACAAAG ATCCTGGTGCTGAACAAAAGTTCAAGGATATTAGCAATGCTTATGAGGTTTTGTCTGATG ATGAGAAGCGATCAATCTATGATAAATATGGAGAAGCTGGTTTGAAGGGTGCTGGAATGG GAACAGGAGATTACTCAAACCCATTCGATCTCTTTGAATCATTATTCGAAGGCTTTGGTG GAATGGGGGGAATGGGAGGCCGTGCTGCTCGGAACAGACCAATGCAGGGTGATGATGAGG CCTACAATCTGGTACTCAATTTCAAGGAAGCGGTGTTTGGTGTAGAGAAAGAAATTGAGA TCACCAGACTGGAAGGCTGTAATACATGTGATGGAACTGGTGCCAAGCCTGGAACGAAAC CAACCACATGCAAAACATGTGGAGGACAGGGACAAGTGGTCTCCTCAACAAGAACGCCAC TTGGAATATTCCAGCAGGTCTCCACCTGCAATACTTGCGGAGGCACTGGTGAATTCTCTA CCCCGTGCAACACTTGTGGGGGTGATGGCCGAGTGCGGAAGACAAAAAGGATCAGTCTAA AGGTTCCTGCTGGTGTTGATTCTGGAAGCAGATTGAGGGTCCGGTCTGAGGGGAATGCTG GGCGGAGAGGAGGCCCTCCTGGAGATCTTTATGTGTTTATTGATGTTCTCTCTGATCCTG TTCTTAAGCGAGATGGGACAAACATTCTATACACATGCAAAGTTTCATATATTGACGCAA TTCTTGGGACAACCGTCAAGGTTCCCACTGTTGATGGGATGGTTGACCTGAAGATCCCCT CCGGTACCCAGCCAGGCACAACGTTAGTGATGTCCAAGAAAGGTGTCCCACTCCTCGGGA AGTCAAATGCTCGTGGAGACCAGCTAGTGCGTGTGCAGGTCGAGATTCCAAAGCGTCTGA GCAGCGACGAGAGGAAGCTGATTGAAGAACTTGCAAACCTAAACAAGGCTCAAACAGCAA ACAGCAGGAGATAATTCCATGAGGCTTCATTGGACAAAATGCTTTGGCAATATGCAATTT TAACGCAAATTGCAGTGACTAAGTGAGCATGAACTGGTAAATCACTTCACAAACTGTACG CTCATGCTGCGCCGTACCATCGGTGGGAACTGTGAATTCTCATGTCTGTAACTTCATTTT TAAGCCATAGAAATCTAGTTCCATCCAAAACACCAAAACGGATGGTGTTTTACAGTAGCT TGTCATATGCTTTTAGGCGAGCTTATTAGTCTATTTTTCATAATACTTTTTCACAATTTT GAAAGGCCTAGGGAGAAATATTTAATGGTGCAAAAGGGACGAGTTTTGAAACATTTGTTT GTCGCAGAAGCACCAGACCATTCTGATTGTTATTGTAAGCTGTAACATCAAAGTTTTGGC AGCAGGTTTTCATGTGCTCTTAAGCGTTGGGGGTT