Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0333200-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:15609569:15613588:-1 gene:Os05g0333200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DAIKOKU DWARF description:Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1). (Os05t0333200-00)
Sequence

ATGTCCGTGCTTACCTGTGTGCTTGATAACATGGGCTCATCCTGTAGCAGATCTCATTCT
TTAAGTGAGGCTGAAACAACCAAAAATGCAAAATCTGCAGACATTGACAGGCGAATTTTG
CAAGAGACAAAAGCAGAGCAACACATCCACAAGCTCTTACTTCTTGGTGCGGGAGAATCA
GGGAAGTCTACGATATTTAAACAGATTAAGCTCCTTTTCCAAACTGGCTTTGATGAGGCA
GAACTTAGGAGCTACACATCAGTTATCCATGCAAACGTCTATCAGACAATTAAAATACTA
TATGAAGGAGCAAAAGAACTCTCACAAGTGGAATCAGATTCCTCAAAGTATGTTATATCC
CCAGATAACCAGGAAATTGGAGAAAAACTATCAGATATTGATGGCAGGTTGGATTATCCA
CTGCTGAACAAAGAACTTGTACTCGATGTAAAAAGGTTATGGCAAGACCCAGCCATTCAG
GAAACTTACTTACGTGGAAGTATTCTGCAACTTCCTGATTGTGCACAATACTTCATGGAA
AATTTGGATCGATTAGCTGAAGCAGGTTATGTGCCAACAAAGGAGGATGTGCTTTATGCA
AGAGTACGGACAAATGGTGTTGTACAAATACAATTTAGTCCTGTTGGAGAAAACAAAAGA
GGTGGAGAGGTATATAGGTTGTATGATGTAGGAGGCCAGAGGAATGAGAGGAGAAAGTGG
ATTCATCTTTTTGAAGGTGTTAATGCGGTAATCTTTTGTGCTGCCATTAGCGAATATGAT
CAGATGCTATTTGAAGATGAGACAAAAAACAGAATGATGGAGACCAAGGAACTCTTTGAC
TGGGTTTTAAAGCAAAGATGTTTTGAGAAAACATCATTCATTCTGTTTCTCAACAAATTT
GATATATTCGAGAAGAAAATACAAAAGGTTCCTTTAAGTGTGTGCGAGTGGTTTAAAGAC
TACCAGCCTATTGCACCTGGGAAACAGGAGGTTGAACATGCATATGAGTTTGTCAAGAAG
AAGTTTGAAGAGCTCTACTTCCAGAGCAGCAAGCCTGACCGTGTGGACCGCGTCTTCAAA
ATCTACAGAACTACGGCCCTAGACCAGAAACTTGTAAAGAAGACATTCAAGTTGATTGAT
GAGAGCATGAGACGCTCCAGGGAAGGAACTTGA

Peptide Sequence

PEP ID

Os05t0333200-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:15609569:15613588:-1 gene:Os05g0333200 transcript:Os05t0333200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DAIKOKU DWARF description:Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1). (Os05t0333200-00)
Sequence

MSVLTCVLDNMGSSCSRSHSLSEAETTKNAKSADIDRRILQETKAEQHIHKLLLLGAGES
GKSTIFKQIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVIS
PDNQEIGEKLSDIDGRLDYPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFME
NLDRLAEAGYVPTKEDVLYARVRTNGVVQIQFSPVGENKRGGEVYRLYDVGGQRNERRKW
IHLFEGVNAVIFCAAISEYDQMLFEDETKNRMMETKELFDWVLKQRCFEKTSFILFLNKF
DIFEKKIQKVPLSVCEWFKDYQPIAPGKQEVEHAYEFVKKKFEELYFQSSKPDRVDRVFK
IYRTTALDQKLVKKTFKLIDESMRRSREGT

Transcript Sequence

Transcript ID

Os05t0333200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:15609569:15613588:-1 gene:Os05g0333200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DAIKOKU DWARF description:Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1). (Os05t0333200-00)
Sequence

GGATCCTGAGATCTAGACGTCAACGTGCTTCCTGGAAAGAGAGAGGCTCAGGCATGAGAG
CATACCTCTAAAATAATGTCCGTGCTTACCTGTGTGCTTGATAACATGGGCTCATCCTGT
AGCAGATCTCATTCTTTAAGTGAGGCTGAAACAACCAAAAATGCAAAATCTGCAGACATT
GACAGGCGAATTTTGCAAGAGACAAAAGCAGAGCAACACATCCACAAGCTCTTACTTCTT
GGTGCGGGAGAATCAGGGAAGTCTACGATATTTAAACAGATTAAGCTCCTTTTCCAAACT
GGCTTTGATGAGGCAGAACTTAGGAGCTACACATCAGTTATCCATGCAAACGTCTATCAG
ACAATTAAAATACTATATGAAGGAGCAAAAGAACTCTCACAAGTGGAATCAGATTCCTCA
AAGTATGTTATATCCCCAGATAACCAGGAAATTGGAGAAAAACTATCAGATATTGATGGC
AGGTTGGATTATCCACTGCTGAACAAAGAACTTGTACTCGATGTAAAAAGGTTATGGCAA
GACCCAGCCATTCAGGAAACTTACTTACGTGGAAGTATTCTGCAACTTCCTGATTGTGCA
CAATACTTCATGGAAAATTTGGATCGATTAGCTGAAGCAGGTTATGTGCCAACAAAGGAG
GATGTGCTTTATGCAAGAGTACGGACAAATGGTGTTGTACAAATACAATTTAGTCCTGTT
GGAGAAAACAAAAGAGGTGGAGAGGTATATAGGTTGTATGATGTAGGAGGCCAGAGGAAT
GAGAGGAGAAAGTGGATTCATCTTTTTGAAGGTGTTAATGCGGTAATCTTTTGTGCTGCC
ATTAGCGAATATGATCAGATGCTATTTGAAGATGAGACAAAAAACAGAATGATGGAGACC
AAGGAACTCTTTGACTGGGTTTTAAAGCAAAGATGTTTTGAGAAAACATCATTCATTCTG
TTTCTCAACAAATTTGATATATTCGAGAAGAAAATACAAAAGGTTCCTTTAAGTGTGTGC
GAGTGGTTTAAAGACTACCAGCCTATTGCACCTGGGAAACAGGAGGTTGAACATGCATAT
GAGTTTGTCAAGAAGAAGTTTGAAGAGCTCTACTTCCAGAGCAGCAAGCCTGACCGTGTG
GACCGCGTCTTCAAAATCTACAGAACTACGGCCCTAGACCAGAAACTTGTAAAGAAGACA
TTCAAGTTGATTGATGAGAGCATGAGACGCTCCAGGGAAGGAACTTGATTCAGAGCTAAG
ACTAGGTTGTAAGTCACACAGGGAAGGTAATTAGGACGGCGAGAGGAACAAAGTTTCACA
CTGTCACAGCTTTATCTGTTGTAATTCTTTTACACGTGGACCATTGATTGATCTTTTGGT
TCTTACTGTGGGCTGTTCAGGTCTGTACCCTATTTTTTGTTCTCTAGTTAGCCATTGTGC
AAATTTTCCTTGAATCAGATTCTCTACCTGTTGTCTATGTGTGTTATCTTGGTCTGTTAA
TTTGCATAGCCCACTTGTTCATT