Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0319200-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:14821904:14824572:-1 gene:Os05g0319200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 4 description:Similar to 1-aminocyclopropane-1-carboxylic acid synthase. (Os05t0319200-00)
Sequence

ATGGGTGTCAAGCTGTTGGCTGACGGCTGCGCCGGCGCCTCGTCGTCGCCTGCGCTGTCG
CGGGTGGCGACCTCCGCGGCGCACGGCGAGGGCTCCCCCTACTTCGCCGGGTGGAAGGCC
TACGACGAAGACCCCTACGACGCCGCCGCGAACCCGGACGGCGTCATCCAGATGGGCCTC
GCCGAGAACCAGGTCTCCATCGACCTCCTCGAGGGCTACCTCCGGGAGCACCCGGAGGCC
GCCGCCTGGGGCGTCGCCGGCGACGGCGGCGGCGACAGCTTCAGGGACAATGCGCTGTTC
CAGGACTACCATGGCCTCGCCAACTTCAGGAAGGCGATGGCAAGATTCATGGAGAAGATA
ATGGGTGGCAAGGCGACGTTCGACCCCGACCGCATCGTCCTCACTGCCGGAGCGACGGCG
GCCAACGAGCTCCTCACCTTCATCCTCGCCGACCCCAGAGACGCCCTGCTGATCCCTACC
CCTTACTATCCAGGGTTCGACAGGGACCTGAGGTGGAGGACGGGCGTCAACGTCGTGCCG
GTGCACTGCGACAGCGCGAACGGGTTCCAGGTCACGGCCGCCGCGCTCCAGGCGGCGCAC
GACGAGGCCGCCGCGGCGGGCATGCGCGTCCGCGGCGTCCTGATCACGAACCCGTCCAAC
CCGCTCGGCACCACGGCGAGGCGCGAGGCGCTCGAGGGCATCCTCGGCTTCGTGGCGCGC
AACGACATCCACCTCGTCTCCGACGAGATCTACTCCGGCTCCGTCTTCGCCGCGCCGGAC
CTCGTCAGCGTGGCGGAGCTCGTCGAGTCGTCGTCCTCGCGCGCACGGCACCGCGGCGAG
GACGACGACGGCGACGTCGGCGTCGCCGACCGCGTGCACGTCGTGTACAGCCTGTCCAAG
GACCTGGGCCTCCCGGGGTTCCGCGTCGGCGTGGTGTACTCGCGCAACGACGCCGTGGTC
GCCGCGGCGCGGCGCATGTCGAGCTTCACCCTCGTGTCGTCGCAGACGCAGAGGACGCTG
GCCGCCGTGCTGTCCGACGAGGCGTTCGTCGACGCCTACGTCGCCGCCAACCGGGCGCGC
CTCCGGGAGCGGCACGACCACGTCGTGGCGGGGCTGGCCCGCGCCGGCGTGCCGTGCCTG
CGCGGCAACGCCGGGCTGTTCGTGTGGATGGACATGCGGCGGCTCCTGCTCGGCGACGGC
GGCGACGCCGCGACCTTCGCCGGCGAGCTGAGGCTGTGGGACAGGCTGCTGCGCGAGGTG
AAGCTCAACGTCTCGCCGGGCTCGTCGTGCCATTGCTCGGAGCCCGGCTGGTTCAGGGTG
TGCTTCGCGAACATGAGCCTGGCCACCCTGGATGTTGCGCTGGAGAGGATAAGCCGCTTC
ATGGACGCGTGGTGCAAAGCAACAATTGGGAAATTTAACCATTTGCAACCCAACAGATGT
GAGGTGAATTATTTTGCACTTGAGAGGTACCAAGGGCATGTGCAACAGTAA

Peptide Sequence

PEP ID

Os05t0319200-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:14821904:14824572:-1 gene:Os05g0319200 transcript:Os05t0319200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 4 description:Similar to 1-aminocyclopropane-1-carboxylic acid synthase. (Os05t0319200-00)
Sequence

MGVKLLADGCAGASSSPALSRVATSAAHGEGSPYFAGWKAYDEDPYDAAANPDGVIQMGL
AENQVSIDLLEGYLREHPEAAAWGVAGDGGGDSFRDNALFQDYHGLANFRKAMARFMEKI
MGGKATFDPDRIVLTAGATAANELLTFILADPRDALLIPTPYYPGFDRDLRWRTGVNVVP
VHCDSANGFQVTAAALQAAHDEAAAAGMRVRGVLITNPSNPLGTTARREALEGILGFVAR
NDIHLVSDEIYSGSVFAAPDLVSVAELVESSSSRARHRGEDDDGDVGVADRVHVVYSLSK
DLGLPGFRVGVVYSRNDAVVAAARRMSSFTLVSSQTQRTLAAVLSDEAFVDAYVAANRAR
LRERHDHVVAGLARAGVPCLRGNAGLFVWMDMRRLLLGDGGDAATFAGELRLWDRLLREV
KLNVSPGSSCHCSEPGWFRVCFANMSLATLDVALERISRFMDAWCKATIGKFNHLQPNRC
EVNYFALERYQGHVQQ

Transcript Sequence

Transcript ID

Os05t0319200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:14821904:14824572:-1 gene:Os05g0319200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 4 description:Similar to 1-aminocyclopropane-1-carboxylic acid synthase. (Os05t0319200-00)
Sequence

CACACACGTACGCACACCTGTCTTGCGTTGCATTCCGTTGCTTTCTCTTACGAGCACTGC
GCAAGAAGCGAGAGCCCAAGAGCAGCTAGCTAGCAATGGGTGTCAAGCTGTTGGCTGACG
GCTGCGCCGGCGCCTCGTCGTCGCCTGCGCTGTCGCGGGTGGCGACCTCCGCGGCGCACG
GCGAGGGCTCCCCCTACTTCGCCGGGTGGAAGGCCTACGACGAAGACCCCTACGACGCCG
CCGCGAACCCGGACGGCGTCATCCAGATGGGCCTCGCCGAGAACCAGGTCTCCATCGACC
TCCTCGAGGGCTACCTCCGGGAGCACCCGGAGGCCGCCGCCTGGGGCGTCGCCGGCGACG
GCGGCGGCGACAGCTTCAGGGACAATGCGCTGTTCCAGGACTACCATGGCCTCGCCAACT
TCAGGAAGGCGATGGCAAGATTCATGGAGAAGATAATGGGTGGCAAGGCGACGTTCGACC
CCGACCGCATCGTCCTCACTGCCGGAGCGACGGCGGCCAACGAGCTCCTCACCTTCATCC
TCGCCGACCCCAGAGACGCCCTGCTGATCCCTACCCCTTACTATCCAGGGTTCGACAGGG
ACCTGAGGTGGAGGACGGGCGTCAACGTCGTGCCGGTGCACTGCGACAGCGCGAACGGGT
TCCAGGTCACGGCCGCCGCGCTCCAGGCGGCGCACGACGAGGCCGCCGCGGCGGGCATGC
GCGTCCGCGGCGTCCTGATCACGAACCCGTCCAACCCGCTCGGCACCACGGCGAGGCGCG
AGGCGCTCGAGGGCATCCTCGGCTTCGTGGCGCGCAACGACATCCACCTCGTCTCCGACG
AGATCTACTCCGGCTCCGTCTTCGCCGCGCCGGACCTCGTCAGCGTGGCGGAGCTCGTCG
AGTCGTCGTCCTCGCGCGCACGGCACCGCGGCGAGGACGACGACGGCGACGTCGGCGTCG
CCGACCGCGTGCACGTCGTGTACAGCCTGTCCAAGGACCTGGGCCTCCCGGGGTTCCGCG
TCGGCGTGGTGTACTCGCGCAACGACGCCGTGGTCGCCGCGGCGCGGCGCATGTCGAGCT
TCACCCTCGTGTCGTCGCAGACGCAGAGGACGCTGGCCGCCGTGCTGTCCGACGAGGCGT
TCGTCGACGCCTACGTCGCCGCCAACCGGGCGCGCCTCCGGGAGCGGCACGACCACGTCG
TGGCGGGGCTGGCCCGCGCCGGCGTGCCGTGCCTGCGCGGCAACGCCGGGCTGTTCGTGT
GGATGGACATGCGGCGGCTCCTGCTCGGCGACGGCGGCGACGCCGCGACCTTCGCCGGCG
AGCTGAGGCTGTGGGACAGGCTGCTGCGCGAGGTGAAGCTCAACGTCTCGCCGGGCTCGT
CGTGCCATTGCTCGGAGCCCGGCTGGTTCAGGGTGTGCTTCGCGAACATGAGCCTGGCCA
CCCTGGATGTTGCGCTGGAGAGGATAAGCCGCTTCATGGACGCGTGGTGCAAAGCAACAA
TTGGGAAATTTAACCATTTGCAACCCAACAGATGTGAGGTGAATTATTTTGCACTTGAGA
GGTACCAAGGGCATGTGCAACAGTAA