Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0318300-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:14770514:14773094:1 gene:Os05g0318300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os05t0318300-01)
Sequence

ATGGCTACCACCGCCGCGACGACCATGGTGGCGGCGGTGCACCACCCCCGCCCCTGCTTC
CGCGTGCGCGCCGCCTGGGACATGAACCCGAGCGCCTCCCCCAAGCCCAAGGCCAAGCCC
CCGCCTCCCCCGCCGCCGCCGTTGCCGACCGCCCCCGCCCCCACCCACGCCGACCTCTTC
GCCCGCCACAGCAACAGCGAGGGCCAAGTGCCAAAGAAGACCACAAGTATGGGATTTGAA
AGGTGGTGGTTACCACCTCCGCCAGAGGTGAAGAAGCCCCGTTCGCTCTACAACGCTGCA
TCATTGGCGTACTTGGGGGACTGCATATATGAACTTTATGCTCGGAGACATTTCTTCTTT
CCACCACTGAGCATCAATGACTACAACAAGCGTGTAATGGATGTCGTGAAATGTGAATCA
CAGGACCTTCTGCTGAACAAACTTCTTGGAGAAGATTTTCTAACTCAAGAAGAAAGGGAC
ATACTTCGTTGGGGAAGAAATATTGTTAGCAGCAAGACACGTACCAGAAAACGTGCTGGA
ATTGCAGTTTATAATCGAGCATCTTCACTTGAGACACTGATTGGATATCTTTACCTCACA
AATTTCAAGCGCTTGGAGCAATTGATGTTCCAGTTAGGATTTACAAGTGGTGCTTCCTCA
CATCATATTGCAGATGAGCTAGTCTCAGGCTTTAAGAAAAAGAACTCCACTTCTGTACAA
TCTCAGCAACAAGCAGCGCAGTGA

Peptide Sequence

PEP ID

Os05t0318300-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:14770514:14773094:1 gene:Os05g0318300 transcript:Os05t0318300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os05t0318300-01)
Sequence

MATTAATTMVAAVHHPRPCFRVRAAWDMNPSASPKPKAKPPPPPPPPLPTAPAPTHADLF
ARHSNSEGQVPKKTTSMGFERWWLPPPPEVKKPRSLYNAASLAYLGDCIYELYARRHFFF
PPLSINDYNKRVMDVVKCESQDLLLNKLLGEDFLTQEERDILRWGRNIVSSKTRTRKRAG
IAVYNRASSLETLIGYLYLTNFKRLEQLMFQLGFTSGASSHHIADELVSGFKKKNSTSVQ
SQQQAAQ

Transcript Sequence

Transcript ID

Os05t0318300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:14770514:14773094:1 gene:Os05g0318300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os05t0318300-01)
Sequence

GTCCACACATGGCTACCACCGCCGCGACGACCATGGTGGCGGCGGTGCACCACCCCCGCC
CCTGCTTCCGCGTGCGCGCCGCCTGGGACATGAACCCGAGCGCCTCCCCCAAGCCCAAGG
CCAAGCCCCCGCCTCCCCCGCCGCCGCCGTTGCCGACCGCCCCCGCCCCCACCCACGCCG
ACCTCTTCGCCCGCCACAGCAACAGCGAGGGCCAAGTGCCAAAGAAGACCACAAGTATGG
GATTTGAAAGGTGGTGGTTACCACCTCCGCCAGAGGTGAAGAAGCCCCGTTCGCTCTACA
ACGCTGCATCATTGGCGTACTTGGGGGACTGCATATATGAACTTTATGCTCGGAGACATT
TCTTCTTTCCACCACTGAGCATCAATGACTACAACAAGCGTGTAATGGATGTCGTGAAAT
GTGAATCACAGGACCTTCTGCTGAACAAACTTCTTGGAGAAGATTTTCTAACTCAAGAAG
AAAGGGACATACTTCGTTGGGGAAGAAATATTGTTAGCAGCAAGACACGTACCAGAAAAC
GTGCTGGAATTGCAGTTTATAATCGAGCATCTTCACTTGAGACACTGATTGGATATCTTT
ACCTCACAAATTTCAAGCGCTTGGAGCAATTGATGTTCCAGTTAGGATTTACAAGTGGTG
CTTCCTCACATCATATTGCAGATGAGCTAGTCTCAGGCTTTAAGAAAAAGAACTCCACTT
CTGTACAATCTCAGCAACAAGCAGCGCAGTGAATAGTTTCTGTATTGCAGCAAACATGGT
ATGATCTAAACAATAGTTATCTGGTGACCACAACCAGCACAAAAATTCATTTAGTTTTGG
TGTATGACATCCAAAAGTGGTTGCTCAATGAATGAATAGCAATTACCGTTTGTCTGTCAA
ACAAGTATCGAGTGAATTGAGCAATGTACATGTATGCAAATATCATTCAGTGCAAGAAAA
TGGTGTCACTTCCAGGAGGGTGTGGCGGTTCTGATCTGTAGATTCTGAGGTGGCAAGCCG
TTGTGTTATTACTACTCATTAGGTTGATATAGGTCGTGGTATCTTTGACACCTTGTGTAT
GAAGGAGCTGCGAAACTGCAAGATATGCTGAATGATTTGATGCAGAGTTTTAGCACGACT
TCAGAATTAACCTGTTCTATGTGCTTCATGGATTCAGTGCACTACCATTATGAGACAGAT
GCCTTTGCTTTGCTGTTTGTTGTGATCTAATGTAAACAACACAATGTGGAAGTATTTGAG
GCCATAAGAAAAGTGGCAGAGTTGGT