Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0317200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:14688251:14701323:1 gene:Os05g0317200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONG-CHAIN ACYL-COA SYNTHETASE 8 description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0317200-01)
Sequence	ATGGGAGAAAATACTGGCGATAATCCAAACATGTCAATTCTTCAAAGAATTGCCACAAGT GATGTTCCACTGGTGAAAGAGTATGGTCTGCCTGGAATTATTGGTGCCATTCTACTTGCT GTAGTTATTCCTATCATGCTTTCTTCCATATTCAACAAAAAGGGAAAGAAAAGAGCAGTA CAAGCTGATGTGGGTGGTGAGGCAGGACTTGCCATGCGAAACAGTAGATTTTCCATGTTA GTTGAAGTTCCATGGGAGGGTGCCACCACAATGGCAGCTTTATTTGAGATGGCTAGCAAA AAATACCCTCGACACAGGTGTCTTGGCACAAGGAAGCTAATCAATAGAGAATTTGTGGAG TCACCTGATGGCAGGAAGTTCGAGAAATTGCATTTAGGTGAATATGAATGGGATACCTAC GCAGAAGCATTTAGTCGTGCATGTAATTTTTCTTCTGGTCTCATCAAGTTGGGTCACCAA CGAGATAGTCGTGCTGCAATATTTGCTGATACAAGAACTGAGTGGATCATTGCTGCTCAG GGATGCTTTCGACAAAATCTAACAGTTGTAACTATCTATGCATCTCTTGGCGAGGATGCA CTGGTGCATTCACTGAATGAGACACAGGTTTCAACTCTGATATGTGATTCAAAGCAACTT AAGAAGCTACCTGCAATCAGTTCCAAGTTGCAGAGTGTTAAGCATGTTATCTATATTGAG GATGAACCTGTTGAGGCTGAGGTACTCAATCAAATGAAGCACTGGACAACATTTTCTTTT GGTGAAGTTGAAGAATTGGGTAAAACATCACATACAGATGCAAGATTACCTTCAAGCACT GATACTGCAGTTATTATGTATACAAGTGGAAGTACGGGTCTTCCCAAGGGTGTAATGATT ACACATGGAAATATGGTGGCCACAACTGCAGCTGTCATGACAATCATACCAAAACTTGGC ACAGGGGATGTTTATCTGGCATACCTTCCGCTGGCTCATGTCTTTGAACTAGCAGCAGAG ACTGTCATGTTAGCTTCTGGTGCTGCCATTGGATATGGCTCAGCTCTGACTATGACAGAT ACATCAAATAAAATAAAGAAGGGGACAAAAGGAGATGTTTCTGCACTGAAGCCTACTCTT ATGATTTCAGTCCCTGCAATTTTAGACCGCATCAGAGATGCCGTGTTTAAAAAGGTTGGT GAGAAGGGTGGTCTGACCAAAAAGCTGTTTGACATTGCCTATAAACGAAATCTTGGAGCT ATTGAAGGAAGTTGGTTTGGATCCTGGGCACCAGAGAGGATGATATGGGATAACCTCATT TTTAAACCAATACGTTCCATGCTTGGTGGGCGCATTAGATTTGTTCTTTGTGGTGGTGCA CCTCTATCGAGTGACACACAAAGATTTATGAATATATGTCTTGGTGTACCAGTAGGTCAA GGCTATGGATTGACAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGT GTGGGCCGTGTTGGTCCACCCCTTCCTTGTTGCTATGTCAAGCTCGTTTCATGGGAAGAA GGTGGCTATAAAATTTCTGATTCTCCAATGCCCCGAGGAGAGGTTGTAGTTGGTGGATAC AGCATAACAAAAGGTTATTTCAACAATGAAGCAAAAACAAATGAGGTCTACAAGGTAGAT GAGAGGGGAATGCGCTGGTTTTACACTGGAGATATTGGCCAGTTCCATCCTGATGGGTGC CTCGAGATCATTGATAGAAAAAAGGATATAGTAAAACTTCAGCATGGAGAATATGTGTCT CTTGGCAAGGTTGAATCAGCTCTAACTACTAGCAATTATGTGGACAGCATAATGGTTTAT GCTGATCCATTTCATAATTATTGTGTGGCGTTGGTAGTGCCGGCGCACCAGGCCTTAGAG CAGTGGGCTCAAAATTCTGGGATTAACTACAAAAACTTTGATGAGCTGTGCCACAATGAT CAAGCCATTAAGGAGGTCCAGCAATCTCTATCAAAGGCTGCAAAAGCAGCGAGGCTTGAG AAGTTTGAAATACCAGCAAAGATTGTGTTGCTGCCTGAACCATGGACTCCAGAGTCTGGG CTGGTGACAGCTGCACTTAAACTGAAGAGGGAGCAGATAAAGACCAAATTCAAAGATGAT CTGGGCAAGCTCTATCACTGA

Peptide Sequence

PEP ID	Os05t0317200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:14688251:14701323:1 gene:Os05g0317200 transcript:Os05t0317200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONG-CHAIN ACYL-COA SYNTHETASE 8 description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0317200-01)
Sequence	MGENTGDNPNMSILQRIATSDVPLVKEYGLPGIIGAILLAVVIPIMLSSIFNKKGKKRAV QADVGGEAGLAMRNSRFSMLVEVPWEGATTMAALFEMASKKYPRHRCLGTRKLINREFVE SPDGRKFEKLHLGEYEWDTYAEAFSRACNFSSGLIKLGHQRDSRAAIFADTRTEWIIAAQ GCFRQNLTVVTIYASLGEDALVHSLNETQVSTLICDSKQLKKLPAISSKLQSVKHVIYIE DEPVEAEVLNQMKHWTTFSFGEVEELGKTSHTDARLPSSTDTAVIMYTSGSTGLPKGVMI THGNMVATTAAVMTIIPKLGTGDVYLAYLPLAHVFELAAETVMLASGAAIGYGSALTMTD TSNKIKKGTKGDVSALKPTLMISVPAILDRIRDAVFKKVGEKGGLTKKLFDIAYKRNLGA IEGSWFGSWAPERMIWDNLIFKPIRSMLGGRIRFVLCGGAPLSSDTQRFMNICLGVPVGQ GYGLTETCAGAAFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYKISDSPMPRGEVVVGGY SITKGYFNNEAKTNEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVS LGKVESALTTSNYVDSIMVYADPFHNYCVALVVPAHQALEQWAQNSGINYKNFDELCHND QAIKEVQQSLSKAAKAARLEKFEIPAKIVLLPEPWTPESGLVTAALKLKREQIKTKFKDD LGKLYH

Transcript Sequence

Transcript ID	Os05t0317200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:14688251:14701323:1 gene:Os05g0317200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONG-CHAIN ACYL-COA SYNTHETASE 8 description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0317200-01)
Sequence	ACTTCCTTCCCTTGGCGTAAAAGAAACAGAAATCTCTCGTCTCGTCGTCTCCGCTCCTTG CGCCAAGACGAGTCGCGGGTGAACAGGGGAGGGGACGCCGGACGCCGATCTCCATCTGGC GAGCAGAGCAACGGAGGGGAGGTGCGCCGATCTCCATCTGGCGAGCAGAGCAGGGGAGGG GAGGGGAGGGGATCGGGCGAAATTTGTGAAATCTTTCAGTTGATGAAATCTTAAAATCAT GGGAGAAAATACTGGCGATAATCCAAACATGTCAATTCTTCAAAGAATTGCCACAAGTGA TGTTCCACTGGTGAAAGAGTATGGTCTGCCTGGAATTATTGGTGCCATTCTACTTGCTGT AGTTATTCCTATCATGCTTTCTTCCATATTCAACAAAAAGGGAAAGAAAAGAGCAGTACA AGCTGATGTGGGTGGTGAGGCAGGACTTGCCATGCGAAACAGTAGATTTTCCATGTTAGT TGAAGTTCCATGGGAGGGTGCCACCACAATGGCAGCTTTATTTGAGATGGCTAGCAAAAA ATACCCTCGACACAGGTGTCTTGGCACAAGGAAGCTAATCAATAGAGAATTTGTGGAGTC ACCTGATGGCAGGAAGTTCGAGAAATTGCATTTAGGTGAATATGAATGGGATACCTACGC AGAAGCATTTAGTCGTGCATGTAATTTTTCTTCTGGTCTCATCAAGTTGGGTCACCAACG AGATAGTCGTGCTGCAATATTTGCTGATACAAGAACTGAGTGGATCATTGCTGCTCAGGG ATGCTTTCGACAAAATCTAACAGTTGTAACTATCTATGCATCTCTTGGCGAGGATGCACT GGTGCATTCACTGAATGAGACACAGGTTTCAACTCTGATATGTGATTCAAAGCAACTTAA GAAGCTACCTGCAATCAGTTCCAAGTTGCAGAGTGTTAAGCATGTTATCTATATTGAGGA TGAACCTGTTGAGGCTGAGGTACTCAATCAAATGAAGCACTGGACAACATTTTCTTTTGG TGAAGTTGAAGAATTGGGTAAAACATCACATACAGATGCAAGATTACCTTCAAGCACTGA TACTGCAGTTATTATGTATACAAGTGGAAGTACGGGTCTTCCCAAGGGTGTAATGATTAC ACATGGAAATATGGTGGCCACAACTGCAGCTGTCATGACAATCATACCAAAACTTGGCAC AGGGGATGTTTATCTGGCATACCTTCCGCTGGCTCATGTCTTTGAACTAGCAGCAGAGAC TGTCATGTTAGCTTCTGGTGCTGCCATTGGATATGGCTCAGCTCTGACTATGACAGATAC ATCAAATAAAATAAAGAAGGGGACAAAAGGAGATGTTTCTGCACTGAAGCCTACTCTTAT GATTTCAGTCCCTGCAATTTTAGACCGCATCAGAGATGCCGTGTTTAAAAAGGTTGGTGA GAAGGGTGGTCTGACCAAAAAGCTGTTTGACATTGCCTATAAACGAAATCTTGGAGCTAT TGAAGGAAGTTGGTTTGGATCCTGGGCACCAGAGAGGATGATATGGGATAACCTCATTTT TAAACCAATACGTTCCATGCTTGGTGGGCGCATTAGATTTGTTCTTTGTGGTGGTGCACC TCTATCGAGTGACACACAAAGATTTATGAATATATGTCTTGGTGTACCAGTAGGTCAAGG CTATGGATTGACAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGTGT GGGCCGTGTTGGTCCACCCCTTCCTTGTTGCTATGTCAAGCTCGTTTCATGGGAAGAAGG TGGCTATAAAATTTCTGATTCTCCAATGCCCCGAGGAGAGGTTGTAGTTGGTGGATACAG CATAACAAAAGGTTATTTCAACAATGAAGCAAAAACAAATGAGGTCTACAAGGTAGATGA GAGGGGAATGCGCTGGTTTTACACTGGAGATATTGGCCAGTTCCATCCTGATGGGTGCCT CGAGATCATTGATAGAAAAAAGGATATAGTAAAACTTCAGCATGGAGAATATGTGTCTCT TGGCAAGGTTGAATCAGCTCTAACTACTAGCAATTATGTGGACAGCATAATGGTTTATGC TGATCCATTTCATAATTATTGTGTGGCGTTGGTAGTGCCGGCGCACCAGGCCTTAGAGCA GTGGGCTCAAAATTCTGGGATTAACTACAAAAACTTTGATGAGCTGTGCCACAATGATCA AGCCATTAAGGAGGTCCAGCAATCTCTATCAAAGGCTGCAAAAGCAGCGAGGCTTGAGAA GTTTGAAATACCAGCAAAGATTGTGTTGCTGCCTGAACCATGGACTCCAGAGTCTGGGCT GGTGACAGCTGCACTTAAACTGAAGAGGGAGCAGATAAAGACCAAATTCAAAGATGATCT GGGCAAGCTCTATCACTGAATCAGCTATGATGTCTGCTGGGGCACCATTATGGATGAAAT AATCTATGTTCTTTTGCTATTTGTCATCCGCAAGGCTCTCTTGACGGGATGACCTGCTCA CTAAATTCAGCGTGTAGTCAATACCCCGAATGCTAGACCCGGGAAACGACTGGGACGTGG AGCAGTGTAATTATGGGATTTCTCCGTGCCTTGTTAGGATAATAAATTTCTCAAGACCGG ATTAACCTGCTTCTGTTCTTCTGGTTAATAATATATAGTTGCATGTTCCTTTTCTTAGCT TGGGATGGTTGTTTCGTACTATGATGATTAACAAAAGCTGTTTCCAC