Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0316200-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:14614490:14619824:1 gene:Os05g0316200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-30-M01. (Os05t0316200-01);Similar to mRNA, clone: RTFL01-30-M01. (Os05t0316200-02);Hypothetical conserved gene. (Os05t0316200-03)
Sequence	ATGACCATGGAGGCGGAGCGCGACGGCGAGGAGCAGCGCCGCCCCCTCCTCTCCTCCTCC TCTCCGCCGCCACCGTCGCCAGCGGCGGAACATCAGCATCAGCACCAGCAGCAGTACCAG TACCTGGGCCGCAGCAGCTCGTCGGCGCTGCGCGGCGGCGGTGGCGGAGGAGGAGGAGGA GCGGGCTGGGGCGTGGGGCCGGAGGTCAGCGCCGCGGAGGTCAGGTCCGCCGCGTCGATC TCCTCCGCCAGCTACTACCCACCGCCGCCGGCTCTCCACCACGACGTCTACCCGCCGGAC ATCCACTCCCCGTCCCCATCGCCAGCTGCCCCTACTGCTCCGCACCCTCACGGAGGATTA GCAATTGTTCCTCAAGGGCCGTACCCGTATGGCGGCGAATACCAGCCTTCTCATGATGGC AGAAGGGATGTACTGGATGAGGTAGAGATCCGGCAGCTCCTTATTGATCATGTTGGGCAT CGGTGCTGCTGGGGAAGTAGGCCTGCTCGCACATGGAAAATTACCTCTATTGAGGATTGC AATGTATATGTTGGAACTTTGGAAACTTTCATCGAGGAAAGGGACACTGTAACTAACAAG GAACCCTATGATGGTGGGAAAATAGATGGAAGAGACAAGGGTCCTGTGCTTGCAGTGTGG GAACTTGATCTGAGGTCTGAGTTTCCTCTACTGTTTGTACCAGAAAAAGAAGTAATGGTC AAGATCCCTCACTCAGAAGTAATTGAAAAATGCTTAGATTGCGAGAGTCGTGGAGAGATA CCATGTCCTATTTGCAATGCTGGTCAGGAGCACGGATTTTACAAGGCAAATCAGATGACC CGTTGCAGTGCATGTCATGGGAGGGGTTTACTTGCTCACCAAGATGGATCTGATACAGTA TGTGGAATGTGCAGTGGTAAAGGAATGTTGCCTTGTATAGCATGTGGATCGCGTGGCCTA GTAACATGCAAGACATGTAGTGGCTATGGTTCCCTTCTCGCAAAAAGCACTGCTCATGTT CGATGGAAGACACTGTCAGCAAGAAAAGTGAGCGCAACTAGGGGAGCTGCCTCTGTGCCT GACGAAGTATTCCACAGAGCCCAGGGGATTCAGCTATGCAACATACAGGCGTACCAGTGC ACTCCTGCATTCTTCGCCGATTCGTACCAGCTCAACCAGTTCTCCTCAGAAGTCGTAGCT AGCCGGCTTCCAGTTCCACCGTCCGCGAGGGTCATTTCCGAGAGGCACATCATCTCCGTC GTGCCTGTGATCCGTGTCACAATGGCTCATCGCAAGCAATGTTTCAGCTTCTACGTCGTC GGCTACAATAGGGATGTTTTCATAAGAGATTATCCTTCGAAATTCTGCTGGGGCCTCTGC TGTTGCTTTGAGTGGCTGCGGAACTAG

Peptide Sequence

PEP ID	Os05t0316200-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:14614490:14619824:1 gene:Os05g0316200 transcript:Os05t0316200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-30-M01. (Os05t0316200-01);Similar to mRNA, clone: RTFL01-30-M01. (Os05t0316200-02);Hypothetical conserved gene. (Os05t0316200-03)
Sequence	MTMEAERDGEEQRRPLLSSSSPPPPSPAAEHQHQHQQQYQYLGRSSSSALRGGGGGGGGG AGWGVGPEVSAAEVRSAASISSASYYPPPPALHHDVYPPDIHSPSPSPAAPTAPHPHGGL AIVPQGPYPYGGEYQPSHDGRRDVLDEVEIRQLLIDHVGHRCCWGSRPARTWKITSIEDC NVYVGTLETFIEERDTVTNKEPYDGGKIDGRDKGPVLAVWELDLRSEFPLLFVPEKEVMV KIPHSEVIEKCLDCESRGEIPCPICNAGQEHGFYKANQMTRCSACHGRGLLAHQDGSDTV CGMCSGKGMLPCIACGSRGLVTCKTCSGYGSLLAKSTAHVRWKTLSARKVSATRGAASVP DEVFHRAQGIQLCNIQAYQCTPAFFADSYQLNQFSSEVVASRLPVPPSARVISERHIISV VPVIRVTMAHRKQCFSFYVVGYNRDVFIRDYPSKFCWGLCCCFEWLRN

Transcript Sequence

Transcript ID	Os05t0316200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:14614490:14619824:1 gene:Os05g0316200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-30-M01. (Os05t0316200-01);Similar to mRNA, clone: RTFL01-30-M01. (Os05t0316200-02);Hypothetical conserved gene. (Os05t0316200-03)
Sequence	GAGACCAACCCCCAACTCGACGATGACCATGGAGGCGGAGCGCGACGGCGAGGAGCAGCG CCGCCCCCTCCTCTCCTCCTCCTCTCCGCCGCCACCGTCGCCAGCGGCGGAACATCAGCA TCAGCACCAGCAGCAGTACCAGTACCTGGGCCGCAGCAGCTCGTCGGCGCTGCGCGGCGG CGGTGGCGGAGGAGGAGGAGGAGCGGGCTGGGGCGTGGGGCCGGAGGTCAGCGCCGCGGA GGTCAGGTCCGCCGCGTCGATCTCCTCCGCCAGCTACTACCCACCGCCGCCGGCTCTCCA CCACGACGTCTACCCGCCGGACATCCACTCCCCGTCCCCATCGCCAGCTGCCCCTACTGC TCCGCACCCTCACGGAGGATTAGCAATTGTTCCTCAAGGGCCGTACCCGTATGGCGGCGA ATACCAGCCTTCTCATGATGGCAGAAGGGATGTACTGGATGAGGTAGAGATCCGGCAGCT CCTTATTGATCATGTTGGGCATCGGTGCTGCTGGGGAAGTAGGCCTGCTCGCACATGGAA AATTACCTCTATTGAGGATTGCAATGTATATGTTGGAACTTTGGAAACTTTCATCGAGGA AAGGGACACTGTAACTAACAAGGAACCCTATGATGGTGGGAAAATAGATGGAAGAGACAA GGGTCCTGTGCTTGCAGTGTGGGAACTTGATCTGAGGTCTGAGTTTCCTCTACTGTTTGT ACCAGAAAAAGAAGTAATGGTCAAGATCCCTCACTCAGAAGTAATTGAAAAATGCTTAGA TTGCGAGAGTCGTGGAGAGATACCATGTCCTATTTGCAATGCTGGTCAGGAGCACGGATT TTACAAGGCAAATCAGATGACCCGTTGCAGTGCATGTCATGGGAGGGGTTTACTTGCTCA CCAAGATGGATCTGATACAGTATGTGGAATGTGCAGTGGTAAAGGAATGTTGCCTTGTAT AGCATGTGGATCGCGTGGCCTAGTAACATGCAAGACATGTAGTGGCTATGGTTCCCTTCT CGCAAAAAGCACTGCTCATGTTCGATGGAAGACACTGTCAGCAAGAAAAGTGAGCGCAAC TAGGGGAGCTGCCTCTGTGCCTGACGAAGTATTCCACAGAGCCCAGGGGATTCAGCTATG CAACATACAGGCGTACCAGTGCACTCCTGCATTCTTCGCCGATTCGTACCAGCTCAACCA GTTCTCCTCAGAAGTCGTAGCTAGCCGGCTTCCAGTTCCACCGTCCGCGAGGGTCATTTC CGAGAGGCACATCATCTCCGTCGTGCCTGTGATCCGTGTCACAATGGCTCATCGCAAGCA ATGTTTCAGCTTCTACGTCGTCGGCTACAATAGGGATGTTTTCATAAGAGATTATCCTTC GAAATTCTGCTGGGGCCTCTGCTGTTGCTTTGAGTGGCTGCGGAACTAGTTATTTCTTGC CATGTGACAAAAATCGAGTGTGCAGTATTTTATAGTATTACATACGGAGTAAGGCTTGTG TATAATTATAGCAAAACCGAAGATTAAAGAGGGTTGAATGAATAAGCATAACCCTGTGTG TTATGCATTTTTT