Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0316000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:14588418:14593699:-1 gene:Os05g0316000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0316000-01)
Sequence	ATGGAGCCACCGGCGGGAGGCTCCTCCGATCATCGCCGGGGTGCCGGGACCGGCGCGGGC GCCGGTGGGGCCGCCTCGCCGTCGGGCCTCCGCCGCTACGGCTTCAGATTCTCCGCCTCC AGCCTCCTGCAGGCCCCGCTCGCTGCGCTGCTCGAGTACTCCGGCGTCGTCCCCTCCGGC CCCGGCGCCCCGCAGGCGGGGCCGCCCTCGGCGCTGTCGTCCTCGCCGTCTTCTTCGTCG TCGTCGTCGGAGGCCGATGGGCTGCTCTCCGCGGCCGCGGCTGGGGACGGGGAGGTCTCG ATCCGGATCCAGGGCGGCCCCGGGGAGGCCGACGCGGCGGGCGTCGCGGGGGCGGCCTCG TCGGGGGAGGACTCGATCGAGGCGACCGCCGCCGGGGACGTTGACCCGGCCTCGGCTGCC GCGGGGAGGGGTGGCGGCGCCGACGCGGAGGCGAGTGGTGGGGGCGCGGACGGCGCGTCC GGGAACGGGGGTGGGGACCGCGCCTACCAGCGGTATGACGTGCACCATGTCGCGAGGTGG ATCGAGCAGATACTGCCATTCTCGCTGCTGCTGCTCGTCGTCTTCATACGGCAGCATCTC CAAGGTTTCTTTGTCACAATTTGGATTGCTGCTGTAATGTTCAAGTCAAATGATATATTG CGGAAGCAAACTGCTTTGAAGGGCGAGAGAAAAATTGCTGTGCTTGTCGGGATTACAGTA ATCTTCATGATTCATGTGTTTGGTGTCTATTGGTGGTACAGGAATGATGATCTTCTCAGA CCTCTGTTCATGCTTCCGCCAAAAGAAATACCGCCATTTTGGCATGCGATTTTTATCATC ATGGTCAATGATACAATGGTTCGCCAGGCAGCAATGGCCATTAAGTGCATGCTACTTATG TACTATAAGAATAGCAGAGGTCGTAACTACCGTAAGCAGGGTCAAATGCTAACCCTTGTG GAATACCTTCTGCTCCTATATCGTGCCTTGTTGCCAACTCCTGTTTGGTACCGTTTCTTT CTGAACAAGGAATATGGGAGTCTTTTCTCATCTTTAACCACTGGACTGTACCTGACCTTC AAGTTAACTTCAGTAGTTGAAAAGGTTCAGTCATTCTTGGCTGCAGTGAAAGCATTGTCA CGTAAAGATGTGCATTATGGGTCTTATGCGACAGCAGAACAGGTAATTGCTGCTGGTGAT ATGTGTGCCATCTGCCAGGAAAAGATGCATGTTCCTGTCCTCCTCCGCTGTAAACATATT TTCTGTGAGGACTGTGTCTCTGAATGGTTTGAGCGAGAACGGACTTGCCCCCTGTGTAGA GCATTGGTAAAGCCTGCTGATATTCGGTCATTTGGTGATGGTTCTACAAGTCTTTTCTTC CAGTTGTTTTAG

Peptide Sequence

PEP ID	Os05t0316000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:14588418:14593699:-1 gene:Os05g0316000 transcript:Os05t0316000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0316000-01)
Sequence	MEPPAGGSSDHRRGAGTGAGAGGAASPSGLRRYGFRFSASSLLQAPLAALLEYSGVVPSG PGAPQAGPPSALSSSPSSSSSSSEADGLLSAAAAGDGEVSIRIQGGPGEADAAGVAGAAS SGEDSIEATAAGDVDPASAAAGRGGGADAEASGGGADGASGNGGGDRAYQRYDVHHVARW IEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGERKIAVLVGITV IFMIHVFGVYWWYRNDDLLRPLFMLPPKEIPPFWHAIFIIMVNDTMVRQAAMAIKCMLLM YYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTF KLTSVVEKVQSFLAAVKALSRKDVHYGSYATAEQVIAAGDMCAICQEKMHVPVLLRCKHI FCEDCVSEWFERERTCPLCRALVKPADIRSFGDGSTSLFFQLF

Transcript Sequence

Transcript ID	Os05t0316000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:14588418:14593699:-1 gene:Os05g0316000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0316000-01)
Sequence	AGGGGCCTCGTCTCCTCCTCCTCCGCCTCCGCCTTGTAGGGTTTCGCCGCCGCCGCTGCC GCCGGCGATGGAGCCACCGGCGGGAGGCTCCTCCGATCATCGCCGGGGTGCCGGGACCGG CGCGGGCGCCGGTGGGGCCGCCTCGCCGTCGGGCCTCCGCCGCTACGGCTTCAGATTCTC CGCCTCCAGCCTCCTGCAGGCCCCGCTCGCTGCGCTGCTCGAGTACTCCGGCGTCGTCCC CTCCGGCCCCGGCGCCCCGCAGGCGGGGCCGCCCTCGGCGCTGTCGTCCTCGCCGTCTTC TTCGTCGTCGTCGTCGGAGGCCGATGGGCTGCTCTCCGCGGCCGCGGCTGGGGACGGGGA GGTCTCGATCCGGATCCAGGGCGGCCCCGGGGAGGCCGACGCGGCGGGCGTCGCGGGGGC GGCCTCGTCGGGGGAGGACTCGATCGAGGCGACCGCCGCCGGGGACGTTGACCCGGCCTC GGCTGCCGCGGGGAGGGGTGGCGGCGCCGACGCGGAGGCGAGTGGTGGGGGCGCGGACGG CGCGTCCGGGAACGGGGGTGGGGACCGCGCCTACCAGCGGTATGACGTGCACCATGTCGC GAGGTGGATCGAGCAGATACTGCCATTCTCGCTGCTGCTGCTCGTCGTCTTCATACGGCA GCATCTCCAAGGTTTCTTTGTCACAATTTGGATTGCTGCTGTAATGTTCAAGTCAAATGA TATATTGCGGAAGCAAACTGCTTTGAAGGGCGAGAGAAAAATTGCTGTGCTTGTCGGGAT TACAGTAATCTTCATGATTCATGTGTTTGGTGTCTATTGGTGGTACAGGAATGATGATCT TCTCAGACCTCTGTTCATGCTTCCGCCAAAAGAAATACCGCCATTTTGGCATGCGATTTT TATCATCATGGTCAATGATACAATGGTTCGCCAGGCAGCAATGGCCATTAAGTGCATGCT ACTTATGTACTATAAGAATAGCAGAGGTCGTAACTACCGTAAGCAGGGTCAAATGCTAAC CCTTGTGGAATACCTTCTGCTCCTATATCGTGCCTTGTTGCCAACTCCTGTTTGGTACCG TTTCTTTCTGAACAAGGAATATGGGAGTCTTTTCTCATCTTTAACCACTGGACTGTACCT GACCTTCAAGTTAACTTCAGTAGTTGAAAAGGTTCAGTCATTCTTGGCTGCAGTGAAAGC ATTGTCACGTAAAGATGTGCATTATGGGTCTTATGCGACAGCAGAACAGGTAATTGCTGC TGGTGATATGTGTGCCATCTGCCAGGAAAAGATGCATGTTCCTGTCCTCCTCCGCTGTAA ACATATTTTCTGTGAGGACTGTGTCTCTGAATGGTTTGAGCGAGAACGGACTTGCCCCCT GTGTAGAGCATTGGTAAAGCCTGCTGATATTCGGTCATTTGGTGATGGTTCTACAAGTCT TTTCTTCCAGTTGTTTTAGACACCAAATGGGAAACTGCTAACATATAACAATGGACAAGC AATTGCTTATGAAAATCCAAGTGAATCCTTTTTTTC