Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0312500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:14356082:14359461:-1 gene:Os05g0312500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os05t0312500-01)
Sequence	ATGATGTCCGAAGGCGAGGAGCACGGGTCGCTGCTGGAGAAGATCAACGACAAGATCCAT GAGTTCAAGAAGGGATCGTCGTCATCCTCGTCCTCGGACTCCGACGACGACAAGAAGCAC CACCACAAGTCCAAGTCCAAGAAGAAGCGGCTCTTCGGCCGGACGAACCCGCTACATCAC GTCCTAGGAGGAGGCAAAGCTGCTGATCTTGTGCTGTGGAGGGACAAGCAGACGTCAGGG AGCATCCTGGCGGGAGTGACCGTGATCTGGTTGCTGTTCGAGGGGATCGGCTACCACCTC CTCACCTTCTTCTGCCACTCGCTCATGGTCTTCCTCACCGTCTGCTTCGTCTGGGCCAAT GCCGCCTCCTTCATCAACAGGGGTCCTCCAAAGTTCCCAGATGCAATTCTGTCTGAAGTC CAATGCCTGAAGATTGCTCATATTCTGAGGAAAGAAATCAATGAGGCCTTCTTAACATTA CGCCATGTCGCCTCCGGAAAAGACCTCAAAACATATCTTATGACAGTTGCAGGCCTCTGG TTCGTTTCTATAATTGGGAGCTGCTTCAGCTTCTTGACTTTGTCTTACACCATTTTCCTG ATGGCATACACACTGCCAATGCTGTATGAGAAATACGAAGATGAAGTCGATGTCGTGGGC GAGAAGGCCCTAATCGAGCTCAAGAAGCAATATGCAGTGCTTGATCACAAGCTTCTCTCA AAGATCCCAATGTTAGCTGAGAAGAAACAGCACTAA

Peptide Sequence

PEP ID	Os05t0312500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:14356082:14359461:-1 gene:Os05g0312500 transcript:Os05t0312500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os05t0312500-01)
Sequence	MMSEGEEHGSLLEKINDKIHEFKKGSSSSSSSDSDDDKKHHHKSKSKKKRLFGRTNPLHH VLGGGKAADLVLWRDKQTSGSILAGVTVIWLLFEGIGYHLLTFFCHSLMVFLTVCFVWAN AASFINRGPPKFPDAILSEVQCLKIAHILRKEINEAFLTLRHVASGKDLKTYLMTVAGLW FVSIIGSCFSFLTLSYTIFLMAYTLPMLYEKYEDEVDVVGEKALIELKKQYAVLDHKLLS KIPMLAEKKQH

Transcript Sequence

Transcript ID	Os05t0312500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:14356082:14359461:-1 gene:Os05g0312500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os05t0312500-01)
Sequence	ACATAGAGAGACATGAGAGGTGAACAAAACCCCCCAGAATAAACACAGGCTTTCCTTCGT TTCAAGGAAGAACACACACAGAGATAGAGGTGAAGAGCGAGAGAGGGTAATAAACCGTTG TGTCTCACTGGGGGAGGGAATGATGTCCGAAGGCGAGGAGCACGGGTCGCTGCTGGAGAA GATCAACGACAAGATCCATGAGTTCAAGAAGGGATCGTCGTCATCCTCGTCCTCGGACTC CGACGACGACAAGAAGCACCACCACAAGTCCAAGTCCAAGAAGAAGCGGCTCTTCGGCCG GACGAACCCGCTACATCACGTCCTAGGAGGAGGCAAAGCTGCTGATCTTGTGCTGTGGAG GGACAAGCAGACGTCAGGGAGCATCCTGGCGGGAGTGACCGTGATCTGGTTGCTGTTCGA GGGGATCGGCTACCACCTCCTCACCTTCTTCTGCCACTCGCTCATGGTCTTCCTCACCGT CTGCTTCGTCTGGGCCAATGCCGCCTCCTTCATCAACAGGGGTCCTCCAAAGTTCCCAGA TGCAATTCTGTCTGAAGTCCAATGCCTGAAGATTGCTCATATTCTGAGGAAAGAAATCAA TGAGGCCTTCTTAACATTACGCCATGTCGCCTCCGGAAAAGACCTCAAAACATATCTTAT GACAGTTGCAGGCCTCTGGTTCGTTTCTATAATTGGGAGCTGCTTCAGCTTCTTGACTTT GTCTTACACCATTTTCCTGATGGCATACACACTGCCAATGCTGTATGAGAAATACGAAGA TGAAGTCGATGTCGTGGGCGAGAAGGCCCTAATCGAGCTCAAGAAGCAATATGCAGTGCT TGATCACAAGCTTCTCTCAAAGATCCCAATGTTAGCTGAGAAGAAACAGCACTAAACTGA TGCTTTGAAGACCAAAGCCCCTTAATTTGCATGTTTCATCTTCAGCTCAGCACATCACCA AAGTAGTCTATTTGGGTTTCCTCTGTCATCTTATAGCAATATTTGGGATGACATCAGATA GAAATGGTTTTGATTCTCGAGCATCCGAAAACCGGGTTTTTTTTTGGAGCACTAGTACGG AGAACACTGTAGACGGTCACATGGAGTAGTTGCTTATGTTCCAGTAACTTTCAGTTCATA TTTTTGAGCTTCTGTTTGGTCACAAGATACATATGACACACAATTTACTATGATTATTAT TTGCATGTATTATTTGAGGTATTCTGAATGCTGAAGACCATACTAATTAGCAGATTAATT CATTTTGGTCCTTTCTGTTG